FFCP PHASE1:Hg19::chr3:58109004..58109015,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:58109004..58109015,+ | |||
|description=CAGE_peak_at_chr3:58109004..58109015,+ | |description=CAGE_peak_at_chr3:58109004..58109015,+ | ||
|id=chr3:58109004..58109015,+ | |id=chr3:58109004..58109015,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.73e-20!254;CL:0000213!3.40e-11!57;CL:0000215!3.40e-11!57;CL:0000220!4.19e-10!246;CL:0002321!8.13e-10!248;CL:0000115!2.68e-09!35;CL:0000071!4.40e-09!18;CL:0002546!4.40e-09!18;CL:0002139!7.91e-09!24;CL:0002078!1.51e-08!44;CL:0000548!2.09e-08!679;CL:0000004!2.09e-08!679;CL:0000255!2.09e-08!679;CL:0000063!2.44e-08!578;CL:0000012!4.04e-08!682;CL:0000076!3.90e-07!62 | |ontology_enrichment_celltype=CL:0000066!4.73e-20!254;CL:0000213!3.40e-11!57;CL:0000215!3.40e-11!57;CL:0000220!4.19e-10!246;CL:0002321!8.13e-10!248;CL:0000115!2.68e-09!35;CL:0000071!4.40e-09!18;CL:0002546!4.40e-09!18;CL:0002139!7.91e-09!24;CL:0002078!1.51e-08!44;CL:0000548!2.09e-08!679;CL:0000004!2.09e-08!679;CL:0000255!2.09e-08!679;CL:0000063!2.44e-08!578;CL:0000012!4.04e-08!682;CL:0000076!3.90e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002188;6.63e-15;5!CL:0002541;6.71e-12;3!CL:0002231;6.71e-12;3!CL:1000746;8.36e-11;7!CL:1000612;8.36e-11;7!CL:0000349;1.49e-10;19!CL:1000449;1.10e-08;15!CL:0000115;1.80e-08;36!CL:1000497;1.12e-07;17!CL:0002518;1.12e-07;17!CL:0002537;1.91e-07;5!CL:0000071;2.42e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,6.50e-15,5;CL:0002541,7.51e-12,3;CL:0002231,7.51e-12,3;CL:1000746,8.24e-11,7;CL:1000612,8.24e-11,7;CL:0000349,1.49e-10,19;CL:0000115,2.85e-10,36;CL:1000449,1.02e-08,15;CL:0002078,4.66e-08,45;CL:1000497,1.04e-07,17;CL:0002518,1.04e-07,17;CL:0000071,1.63e-07,18;CL:0002546,1.63e-07,18;CL:0002537,2.36e-07,5;CL:0000066,4.91e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;2.42e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!4.40e-09!18;UBERON:0004638!4.40e-09!18;UBERON:0004852!4.40e-09!18 | |ontology_enrichment_uberon=UBERON:0001986!4.40e-09!18;UBERON:0004638!4.40e-09!18;UBERON:0004852!4.40e-09!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.71e-13;10!UBERON:0000158;2.71e-13;10!UBERON:0003124;6.71e-12;3!UBERON:0000920;6.71e-12;3!UBERON:0000074;8.36e-11;7!UBERON:0001229;8.36e-11;7!UBERON:0006555;1.10e-08;15!UBERON:0004819;1.10e-08;15!UBERON:0001285;1.10e-08;15!UBERON:0007684;1.10e-08;15!UBERON:0000478;2.58e-08;24!UBERON:0004638;2.42e-07;18!UBERON:0001986;2.42e-07;18!UBERON:0004852;2.42e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.23e-14,14;UBERON:0000158,2.23e-14,14;UBERON:0000920,7.51e-12,3;UBERON:0003124,4.18e-11,7;UBERON:0010532,8.24e-11,7;UBERON:0000074,8.24e-11,7;UBERON:0001229,8.24e-11,7;UBERON:0001230,8.24e-11,7;UBERON:0003220,8.24e-11,7;UBERON:0005749,8.24e-11,7;UBERON:0004199,8.24e-11,7;UBERON:0004209,8.24e-11,7;UBERON:0004198,8.24e-11,7;UBERON:0006554,6.82e-10,47;UBERON:0001008,1.15e-09,48;UBERON:0005103,1.60e-09,8;UBERON:0000083,1.60e-09,8;UBERON:0009201,1.60e-09,8;UBERON:0006553,1.60e-09,8;UBERON:0003074,1.60e-09,8;UBERON:0003060,1.60e-09,8;UBERON:0004211,1.02e-08,15;UBERON:0009773,1.02e-08,15;UBERON:0001231,1.02e-08,15;UBERON:0001285,1.02e-08,15;UBERON:0007684,1.02e-08,15;UBERON:0004208,1.02e-08,15;UBERON:0000080,1.61e-08,9;UBERON:0002120,1.61e-08,9;UBERON:0004875,1.61e-08,9;UBERON:0005721,1.61e-08,9;UBERON:0005754,1.61e-08,9;UBERON:0007297,1.61e-08,9;UBERON:0000478,2.59e-08,24;UBERON:0006555,3.50e-08,16;UBERON:0004819,3.50e-08,16;UBERON:0004638,1.63e-07,18;UBERON:0001986,1.63e-07,18;UBERON:0004852,1.63e-07,18;UBERON:0004876,4.71e-07,11;UBERON:0003064,5.08e-07,28 | |||
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| ||
|short_description=p@chr3:58109004..58109015,+ | |short_description=p@chr3:58109004..58109015,+ | ||
}} | }} |
Latest revision as of 22:52, 29 July 2015
Short description: | p@chr3:58109004..58109015, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:58109004..58109015, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 6.50e-15 | 5 |
chorionic membrane mesenchymal stem cell | 7.51e-12 | 3 |
epithelial cell of prostate | 7.51e-12 | 3 |
glomerular cell | 8.24e-11 | 7 |
kidney corpuscule cell | 8.24e-11 | 7 |
extraembryonic cell | 1.49e-10 | 19 |
endothelial cell | 2.85e-10 | 36 |
epithelial cell of nephron | 1.02e-08 | 15 |
meso-epithelial cell | 4.66e-08 | 45 |
kidney cell | 1.04e-07 | 17 |
kidney epithelial cell | 1.04e-07 | 17 |
blood vessel endothelial cell | 1.63e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.63e-07 | 18 |
amnion mesenchymal stem cell | 2.36e-07 | 5 |
epithelial cell | 4.91e-07 | 253 |