FFCP PHASE1:Hg19::chr8:65492756..65492768,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27319 | |EntrezGene=27319 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11963 | |HGNC=11963 | ||
|TSSclassifier=strong | |||
|UniProt=B4DF88,Q8NFJ8 | |UniProt=B4DF88,Q8NFJ8 | ||
|association_with_transcript=-26bp_to_NM_152414_5end | |association_with_transcript=-26bp_to_NM_152414_5end | ||
|cluster_id=chr8:65492756..65492768,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_BHLHE22_5end | |description=CAGE_peak_2_at_BHLHE22_5end | ||
|id=chr8:65492756..65492768,+ | |id=chr8:65492756..65492768,+ | ||
|ontology_enrichment_celltype=CL:0000047!1.43e-08!8 | |ontology_enrichment_celltype=CL:0000047!1.43e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.84e-15;6!CL:0000404;2.84e-15;6!CL:0002319;7.67e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.04e-19,8;CL:0000540,2.85e-15,6;CL:0000031,2.85e-15,6;CL:0000404,2.85e-15,6;CL:0002319,7.80e-09,25;CL:0000133,5.93e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.71e-29;3!CL:0000031;2.84e-15;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;7.39e-15;6!UBERON:0002619;2.33e-10;22!UBERON:0002680;4.32e-10;9!UBERON:0001895;4.32e-10;9!UBERON:0000956;3.80e-09;25!UBERON:0000203;3.80e-09;25!UBERON:0002021;1.30e-08;5!UBERON:0004733;1.08e-07;12!UBERON:0002028;1.08e-07;12!UBERON:0001950;1.39e-07;20!UBERON:0001016;1.96e-07;83!UBERON:0004732;3.89e-07;13!UBERON:0002791;6.28e-07;32!UBERON:0001869;7.28e-07;32!UBERON:0000955;8.74e-07;68 | |||
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| ||
|short_description=p2@BHLHE22 | |short_description=p2@BHLHE22 | ||
}} | }} |
Latest revision as of 19:23, 18 September 2015
Short description: | p2@BHLHE22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BHLHE22_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -26bp_to_NM_152414_5end |
EntrezGene: | BHLHE22 |
HGNC: | 11963 |
UniProt: | B4DF88Q8NFJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.04e-19 | 8 |
neuron | 2.85e-15 | 6 |
neuroblast | 2.85e-15 | 6 |
electrically signaling cell | 2.85e-15 | 6 |
neural cell | 7.80e-09 | 25 |
neurectodermal cell | 5.93e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.71e-17 | 81 |
nervous system | 1.40e-15 | 89 |
cerebellum | 7.39e-15 | 6 |
rhombic lip | 7.39e-15 | 6 |
regional part of nervous system | 2.26e-10 | 53 |
regional part of brain | 2.26e-10 | 53 |
regional part of cerebral cortex | 2.26e-10 | 22 |
regional part of metencephalon | 4.32e-10 | 9 |
metencephalon | 4.32e-10 | 9 |
future metencephalon | 4.32e-10 | 9 |
ectoderm-derived structure | 5.94e-10 | 171 |
ectoderm | 5.94e-10 | 171 |
presumptive ectoderm | 5.94e-10 | 171 |
brain | 7.48e-10 | 68 |
future brain | 7.48e-10 | 68 |
neural tube | 8.95e-10 | 56 |
neural rod | 8.95e-10 | 56 |
future spinal cord | 8.95e-10 | 56 |
neural keel | 8.95e-10 | 56 |
cerebral cortex | 3.70e-09 | 25 |
pallium | 3.70e-09 | 25 |
occipital lobe | 1.27e-08 | 5 |
segmental subdivision of hindbrain | 1.08e-07 | 12 |
hindbrain | 1.08e-07 | 12 |
presumptive hindbrain | 1.08e-07 | 12 |
neurectoderm | 1.24e-07 | 86 |
neocortex | 1.38e-07 | 20 |
regional part of telencephalon | 3.53e-07 | 32 |
cerebral hemisphere | 3.53e-07 | 32 |
segmental subdivision of nervous system | 3.89e-07 | 13 |
brain grey matter | 9.31e-07 | 34 |
gray matter | 9.31e-07 | 34 |
telencephalon | 9.31e-07 | 34 |