FFCP PHASE1:Hg19::chr16:2041391..2041393,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:2041391..2041393,+
|short_description=p@chr16:2041391..2041393,+
|description=CAGE_peak_at_chr16:2041391..2041393,+
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:2041391..2041393,+ | |||
|coexpression_cluster_id=C123 | |||
|description=CAGE_peak_at_chr16:2041391..2041393,+ | |||
|id=chr16:2041391..2041393,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.08e-37!140;CL:0002087!1.14e-33!119;CL:0002031!9.06e-32!124;CL:0000838!2.80e-30!52;CL:0000988!6.58e-30!182;CL:0000542!1.45e-29!53;CL:0000051!1.45e-29!53;CL:0000037!6.54e-28!172;CL:0000566!6.54e-28!172;CL:0002032!3.75e-25!165;CL:0000837!3.75e-25!165;CL:0000945!9.21e-17!24;CL:0000826!9.21e-17!24;CL:0000080!1.42e-16!6;CL:0002057!1.39e-10!42;CL:0002393!3.07e-10!9;CL:0002397!3.07e-10!9;CL:0000623!3.62e-10!3;CL:0000825!3.62e-10!3;CL:0000860!1.21e-09!45;CL:0000236!1.28e-09!14;CL:0000767!1.57e-09!3;CL:0000084!1.68e-09!25;CL:0000827!1.68e-09!25;CL:0000842!2.27e-09!3;CL:0000791!5.80e-09!18;CL:0000789!5.80e-09!18;CL:0002420!5.80e-09!18;CL:0002419!5.80e-09!18;CL:0000790!5.80e-09!18;CL:0000766!8.26e-08!76;CL:0000624!1.40e-07!6;CL:0000557!1.51e-07!71;CL:0002009!1.55e-07!65;CL:0000224!4.16e-07!4;CL:0000134!4.66e-07!358;CL:0001014!7.67e-07!2;CL:0001016!7.67e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.88e-33;3!CL:0000542;2.04e-17;53!CL:0000236;2.30e-13;13!CL:0000084;2.40e-10;25!CL:0000791;1.60e-09;18!CL:0000789;1.60e-09;18!CL:0002419;1.60e-09;18!CL:0000625;3.78e-09;11!CL:0000945;2.54e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.33e-33,3;CL:0000825,4.33e-33,3;CL:0000838,1.33e-27,52;CL:0000542,4.75e-27,53;CL:0000051,4.75e-27,53;CL:0000738,3.71e-15,136;CL:0002087,1.63e-13,115;CL:0002031,7.04e-13,120;CL:0000988,7.17e-13,177;CL:0000236,1.72e-12,14;CL:0000037,7.28e-12,168;CL:0002032,1.03e-10,161;CL:0000837,1.03e-10,161;CL:0000084,2.23e-10,25;CL:0000827,2.23e-10,25;CL:0000791,1.30e-09,18;CL:0000789,1.30e-09,18;CL:0002420,1.30e-09,18;CL:0002419,1.30e-09,18;CL:0000790,1.30e-09,18;CL:0000625,2.90e-09,11;CL:0000945,2.33e-07,24;CL:0000826,2.33e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;2.04e-17;53!UBERON:0005425;1.01e-11;1!CL:0000790;1.60e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.75e-12!102;UBERON:0003061!6.75e-12!102;UBERON:0002193!3.49e-11!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.01e-11;1!UBERON:0001785;1.01e-11;1!UBERON:0002464;1.01e-11;1!UBERON:0004904;1.01e-11;1!UBERON:0001021;1.01e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.19e-11,1;UBERON:0001785,1.19e-11,1;UBERON:0002464,1.19e-11,1;UBERON:0004904,1.19e-11,1;UBERON:0001021,1.19e-11,1;UBERON:0003902,1.19e-11,1;UBERON:0005425,1.19e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,1.18009283054671,0.767658796194425,0.928896739896456,0,0,0,0,0.568676929949686,0,0,0.601633342410425,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0.365328307529268,0,0,1.77901850772711,0.853460445133014,0,0.574752439954483,0,0,3.98449078376614,4.69789751496751,2.29363936875137,0,1.12101712596307,0,0.196709770113833,0.393010762749165,1.43921049299656,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0.759059076058509,0,0,0,0,0,0,0,0,2.62088766192152,1.60464117470104,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,4.53170748464433,4.52817907204986,5.39040752374943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.50999940573032,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.123563938946503,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58089305518355,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,1.42769420259154,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,1.18009283054671,0.767658796194425,0.928896739896456,0,0,0,0,0.568676929949686,0,0,0.601633342410425,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0.365328307529268,0,0,1.77901850772711,0.853460445133014,0,0.574752439954483,0,0,3.98449078376614,4.69789751496751,2.29363936875137,0,1.12101712596307,0,0.196709770113833,0.393010762749165,1.43921049299656,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0.759059076058509,0,0,0,0,0,0,0,0,2.62088766192152,1.60464117470104,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,4.53170748464433,4.52817907204986,5.39040752374943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.50999940573032,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.123563938946503,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58089305518355,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,1.42769420259154,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:2041391..2041393,+ | |||
}} | }} |
Latest revision as of 06:58, 25 July 2015
Short description: | p@chr16:2041391..2041393, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2041391..2041393, + |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.33e-33 | 3 |
pro-NK cell | 4.33e-33 | 3 |
lymphoid lineage restricted progenitor cell | 1.33e-27 | 52 |
lymphocyte | 4.75e-27 | 53 |
common lymphoid progenitor | 4.75e-27 | 53 |
leukocyte | 3.71e-15 | 136 |
nongranular leukocyte | 1.63e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 7.04e-13 | 120 |
hematopoietic cell | 7.17e-13 | 177 |
B cell | 1.72e-12 | 14 |
hematopoietic stem cell | 7.28e-12 | 168 |
hematopoietic oligopotent progenitor cell | 1.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-10 | 161 |
T cell | 2.23e-10 | 25 |
pro-T cell | 2.23e-10 | 25 |
mature alpha-beta T cell | 1.30e-09 | 18 |
alpha-beta T cell | 1.30e-09 | 18 |
immature T cell | 1.30e-09 | 18 |
mature T cell | 1.30e-09 | 18 |
immature alpha-beta T cell | 1.30e-09 | 18 |
CD8-positive, alpha-beta T cell | 2.90e-09 | 11 |
lymphocyte of B lineage | 2.33e-07 | 24 |
pro-B cell | 2.33e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.19e-11 | 1 |
cranial nerve | 1.19e-11 | 1 |
nerve trunk | 1.19e-11 | 1 |
nerve connecting eye with brain | 1.19e-11 | 1 |
nerve | 1.19e-11 | 1 |
retinal neural layer | 1.19e-11 | 1 |
presumptive neural retina | 1.19e-11 | 1 |