FFCP PHASE1:Hg19::chr5:137225159..137225171,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27039 | |EntrezGene=27039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9012 | |HGNC=9012 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000290431_5end | |association_with_transcript=1bp_to_ENST00000290431_5end | ||
|cluster_id=chr5:137225159..137225171,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_PKD2L2_5end | |description=CAGE_peak_2_at_PKD2L2_5end | ||
|id=chr5:137225159..137225171,+ | |id=chr5:137225159..137225171,+ | ||
|ontology_enrichment_celltype=CL:0000838!4.90e-08!52;CL:0000542!8.97e-08!53;CL:0000051!8.97e-08!53;CL:0000738!9.20e-07!140 | |ontology_enrichment_celltype=CL:0000838!4.90e-08!52;CL:0000542!8.97e-08!53;CL:0000051!8.97e-08!53;CL:0000738!9.20e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0002188;3.60e-11;5!CL:1000746;2.35e-08;7!CL:1000612;2.35e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,3.60e-11,5;CL:1000746,2.35e-08,7;CL:1000612,2.35e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.09e-15!57;UBERON:0005068!9.09e-15!57;UBERON:0006241!9.09e-15!57;UBERON:0007135!9.09e-15!57;UBERON:0002616!5.71e-14!59;UBERON:0002780!1.56e-11!41;UBERON:0001890!1.56e-11!41;UBERON:0006240!1.56e-11!41;UBERON:0003080!4.11e-11!42;UBERON:0002346!9.72e-11!90;UBERON:0000955!1.92e-10!69;UBERON:0006238!1.92e-10!69;UBERON:0001893!1.25e-09!34;UBERON:0002020!1.27e-09!34;UBERON:0003528!1.27e-09!34;UBERON:0003075!2.93e-09!86;UBERON:0007284!2.93e-09!86;UBERON:0001869!3.28e-09!32;UBERON:0001017!3.66e-09!82;UBERON:0002791!5.79e-09!33;UBERON:0005743!2.33e-08!86;UBERON:0000073!5.82e-08!94;UBERON:0001016!5.82e-08!94;UBERON:0002420!1.98e-07!9;UBERON:0007245!1.98e-07!9;UBERON:0010009!1.98e-07!9;UBERON:0010011!1.98e-07!9;UBERON:0000454!1.98e-07!9;UBERON:0007023!2.76e-07!115;UBERON:0009663!3.10e-07!7;UBERON:0002308!4.86e-07!9;UBERON:0000125!4.86e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!9.09e-15!57;UBERON:0005068!9.09e-15!57;UBERON:0006241!9.09e-15!57;UBERON:0007135!9.09e-15!57;UBERON:0002616!5.71e-14!59;UBERON:0002780!1.56e-11!41;UBERON:0001890!1.56e-11!41;UBERON:0006240!1.56e-11!41;UBERON:0003080!4.11e-11!42;UBERON:0002346!9.72e-11!90;UBERON:0000955!1.92e-10!69;UBERON:0006238!1.92e-10!69;UBERON:0001893!1.25e-09!34;UBERON:0002020!1.27e-09!34;UBERON:0003528!1.27e-09!34;UBERON:0003075!2.93e-09!86;UBERON:0007284!2.93e-09!86;UBERON:0001869!3.28e-09!32;UBERON:0001017!3.66e-09!82;UBERON:0002791!5.79e-09!33;UBERON:0005743!2.33e-08!86;UBERON:0000073!5.82e-08!94;UBERON:0001016!5.82e-08!94;UBERON:0002420!1.98e-07!9;UBERON:0007245!1.98e-07!9;UBERON:0010009!1.98e-07!9;UBERON:0010011!1.98e-07!9;UBERON:0000454!1.98e-07!9;UBERON:0007023!2.76e-07!115;UBERON:0009663!3.10e-07!7;UBERON:0002308!4.86e-07!9;UBERON:0000125!4.86e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0000074;2.35e-08;7!UBERON:0001229;2.35e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0003886,3.71e-09,54;UBERON:0010532,2.35e-08,7;UBERON:0000074,2.35e-08,7;UBERON:0001229,2.35e-08,7;UBERON:0001230,2.35e-08,7;UBERON:0003220,2.35e-08,7;UBERON:0005749,2.35e-08,7;UBERON:0004199,2.35e-08,7;UBERON:0004209,2.35e-08,7;UBERON:0004198,2.35e-08,7;UBERON:0002553,3.34e-08,61;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
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| ||
|short_description=p2@PKD2L2 | |short_description=p2@PKD2L2 | ||
}} | }} |
Latest revision as of 21:36, 24 September 2015
Short description: | p2@PKD2L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PKD2L2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 1bp_to_ENST00000290431_5end |
EntrezGene: | PKD2L2 |
HGNC: | 9012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 3.60e-11 | 5 |
glomerular cell | 2.35e-08 | 7 |
kidney corpuscule cell | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
body cavity precursor | 3.71e-09 | 54 |
primitive nephron | 2.35e-08 | 7 |
renal glomerulus | 2.35e-08 | 7 |
renal corpuscle | 2.35e-08 | 7 |
glomerular capsule | 2.35e-08 | 7 |
metanephric mesenchyme | 2.35e-08 | 7 |
glomerular tuft | 2.35e-08 | 7 |
S-shaped body | 2.35e-08 | 7 |
renal vesicle | 2.35e-08 | 7 |
comma-shaped body | 2.35e-08 | 7 |
anatomical cavity | 3.34e-08 | 61 |
mesonephric epithelium | 1.80e-07 | 8 |
mesonephric tubule | 1.80e-07 | 8 |
nephric duct | 1.80e-07 | 8 |
renal duct | 1.80e-07 | 8 |
mesonephric duct | 1.80e-07 | 8 |
pronephric duct | 1.80e-07 | 8 |
mesonephros | 8.85e-07 | 9 |
pronephros | 8.85e-07 | 9 |
nephrogenic cord | 8.85e-07 | 9 |
pronephric mesoderm | 8.85e-07 | 9 |
rostral part of nephrogenic cord | 8.85e-07 | 9 |
presumptive pronephric mesoderm | 8.85e-07 | 9 |