FFCP PHASE1:Hg19::chr16:3070356..3070383,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:3070356..3070383,+
|short_description=p1@TNFRSF12A
|description=CAGE_peak_1_at_TNFRSF12A_5end
|association_with_transcript=-15bp_to_ENST00000341627_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51330 | |EntrezGene=51330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18152 | |HGNC=18152 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000341627_5end | |||
|cluster_id=chr16:3070356..3070383,+ | |||
|coexpression_cluster_id=C1761 | |||
|description=CAGE_peak_1_at_TNFRSF12A_5end | |||
|id=chr16:3070356..3070383,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.03e-33!679;CL:0000004!2.03e-33!679;CL:0000255!2.03e-33!679;CL:0000012!2.05e-32!682;CL:0000220!8.69e-29!246;CL:0002321!1.91e-28!248;CL:0000066!3.99e-26!254;CL:0000055!3.56e-25!180;CL:0000144!9.83e-22!625;CL:0002371!3.35e-18!591;CL:0000003!1.83e-17!722;CL:0000222!3.49e-16!119;CL:0000063!1.67e-13!578;CL:0000192!8.74e-12!42;CL:0000514!8.74e-12!42;CL:0000680!9.61e-12!57;CL:0000056!9.61e-12!57;CL:0000355!9.61e-12!57;CL:0000057!3.14e-11!75;CL:0000359!3.31e-11!32;CL:0000183!3.99e-11!59;CL:0000393!4.19e-11!60;CL:0000211!4.19e-11!60;CL:0000187!7.21e-11!54;CL:0000076!6.10e-07!62;CL:0002076!6.70e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.27e-10;32!CL:0000192;1.34e-08;43!CL:1000449;6.70e-07;15!CL:1000497;7.77e-07;17!CL:0002518;7.77e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.49e-28,250;CL:0000066,3.45e-26,253;CL:0000222,5.56e-16,121;CL:0000057,1.23e-11,76;CL:0000680,1.45e-11,58;CL:0000056,1.45e-11,58;CL:0000355,1.45e-11,58;CL:0000192,1.52e-11,43;CL:0000514,1.52e-11,43;CL:0000359,3.29e-11,32;CL:0000393,6.03e-11,61;CL:0000211,6.03e-11,61;CL:0000187,1.07e-10,55;CL:0002076,5.26e-07,42;CL:1000449,6.71e-07,15;CL:0000076,7.08e-07,63;CL:1000497,7.75e-07,17;CL:0002518,7.75e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;1.34e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;2.72e-08;42!UBERON:0003509;2.72e-08;42!UBERON:0004572;2.72e-08;42!UBERON:0004573;3.43e-08;33!UBERON:0004571;3.43e-08;33!UBERON:0003914;2.82e-07;74!UBERON:0006555;6.70e-07;15!UBERON:0004819;6.70e-07;15!UBERON:0001285;6.70e-07;15!UBERON:0007684;6.70e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.62e-16,199;UBERON:0000486,1.04e-13,83;UBERON:0003914,1.26e-13,117;UBERON:0007503,2.32e-13,78;UBERON:0003104,6.10e-13,160;UBERON:0009142,6.10e-13,160;UBERON:0005256,1.50e-12,122;UBERON:0000490,2.30e-12,148;UBERON:0002329,1.61e-11,71;UBERON:0003059,1.61e-11,71;UBERON:0007282,1.61e-11,71;UBERON:0004290,1.61e-11,71;UBERON:0009618,1.61e-11,71;UBERON:0001637,3.62e-11,42;UBERON:0003509,3.62e-11,42;UBERON:0004572,3.62e-11,42;UBERON:0007524,7.95e-11,73;UBERON:0003077,8.09e-11,72;UBERON:0007285,8.09e-11,72;UBERON:0002049,2.19e-10,78;UBERON:0007798,2.19e-10,78;UBERON:0001134,3.24e-10,62;UBERON:0002036,3.24e-10,62;UBERON:0003082,3.24e-10,62;UBERON:0002385,1.19e-09,64;UBERON:0001015,1.19e-09,64;UBERON:0000383,1.19e-09,64;UBERON:0004872,2.90e-09,83;UBERON:0007500,4.37e-09,59;UBERON:0001981,4.37e-09,59;UBERON:0004537,4.37e-09,59;UBERON:0006965,4.37e-09,59;UBERON:0004573,4.97e-09,33;UBERON:0004571,4.97e-09,33;UBERON:0000055,1.02e-08,68;UBERON:0000119,1.20e-08,309;UBERON:0000483,2.00e-08,306;UBERON:0006554,1.09e-07,47;UBERON:0003102,1.56e-07,99;UBERON:0001048,2.44e-07,160;UBERON:0003100,2.50e-07,41;UBERON:0001008,2.88e-07,48;UBERON:0005423,5.34e-07,581;UBERON:0009569,5.53e-07,112;UBERON:0004211,6.71e-07,15;UBERON:0009773,6.71e-07,15;UBERON:0001231,6.71e-07,15;UBERON:0001285,6.71e-07,15;UBERON:0007684,6.71e-07,15;UBERON:0004208,6.71e-07,15;UBERON:0000922,7.44e-07,592;UBERON:0005085,9.16e-07,31 | |||
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| ||
|short_description=p1@TNFRSF12A | |||
}} | }} |
Latest revision as of 09:03, 16 September 2015
Short description: | p1@TNFRSF12A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFRSF12A_5end |
Coexpression cluster: | C1761_Placental_Alveolar_Smooth_Fibroblast_mesothelioma_Renal_Urothelial |
Association with transcript: | -15bp_to_ENST00000341627_5end |
EntrezGene: | TNFRSF12A |
HGNC: | 18152 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.49e-28 | 250 |
epithelial cell | 3.45e-26 | 253 |
mesodermal cell | 5.56e-16 | 121 |
fibroblast | 1.23e-11 | 76 |
muscle precursor cell | 1.45e-11 | 58 |
myoblast | 1.45e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.45e-11 | 58 |
smooth muscle cell | 1.52e-11 | 43 |
smooth muscle myoblast | 1.52e-11 | 43 |
vascular associated smooth muscle cell | 3.29e-11 | 32 |
electrically responsive cell | 6.03e-11 | 61 |
electrically active cell | 6.03e-11 | 61 |
muscle cell | 1.07e-10 | 55 |
endo-epithelial cell | 5.26e-07 | 42 |
epithelial cell of nephron | 6.71e-07 | 15 |
squamous epithelial cell | 7.08e-07 | 63 |
kidney cell | 7.75e-07 | 17 |
kidney epithelial cell | 7.75e-07 | 17 |