FFCP PHASE1:Hg19::chr16:30751953..30751988,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:30751953..30751988,+
|short_description=p3@SRCAP
|description=CAGE_peak_3_at_SRCAP_5end
|association_with_transcript=0bp_to_ENST00000483578_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10847 | |EntrezGene=10847 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=16974 | |HGNC=16974 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000483578_5end | |||
|cluster_id=chr16:30751953..30751988,+ | |||
|coexpression_cluster_id=C2370 | |||
|description=CAGE_peak_3_at_SRCAP_5end | |||
|id=chr16:30751953..30751988,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.99e-35!254;CL:0002076!3.35e-18!43;CL:0000223!1.01e-12!59;CL:0000076!4.89e-10!62;CL:0002321!5.19e-10!248;CL:0000220!1.09e-09!246;CL:0002368!2.57e-09!13;CL:0002251!6.75e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.07e-16;42!CL:0002368;5.03e-11;13!CL:0002159;1.92e-08;14!CL:0002251;3.02e-08;20!CL:1000497;6.65e-08;17!CL:0002518;6.65e-08;17!CL:1000507;7.93e-08;10!CL:1000494;7.93e-08;10!CL:0000349;1.37e-07;19!CL:0002202;1.89e-07;9!CL:0002632;1.89e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.68e-38,253;CL:0002076,1.86e-21,42;CL:0000223,6.03e-15,58;CL:0002368,5.12e-11,13;CL:0000076,6.37e-11,63;CL:0002159,2.23e-08,14;CL:0002251,3.28e-08,20;CL:1000497,6.82e-08,17;CL:0002518,6.82e-08,17;CL:1000507,8.65e-08,10;CL:1000494,8.65e-08,10;CL:0000349,1.46e-07,19;CL:0002202,1.91e-07,9;CL:0002632,1.91e-07,9;CL:0002077,5.16e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000223;2.82e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.00e-09!106;DOID:1749!7.62e-07!14;DOID:299!7.96e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.61e-09;14!DOID:299;1.63e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.57e-10,106;DOID:1749,3.53e-09,14;DOID:299,1.45e-07,25;DOID:0050687,2.05e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.21e-18!169;UBERON:0000925!8.21e-18!169;UBERON:0006595!8.21e-18!169;UBERON:0000464!1.40e-12!104;UBERON:0001007!6.73e-12!155;UBERON:0001555!6.73e-12!155;UBERON:0007026!6.73e-12!155;UBERON:0001004!5.53e-11!72;UBERON:0001008!7.04e-11!45;UBERON:0006554!1.03e-10!44;UBERON:0003104!7.61e-10!238;UBERON:0009142!7.61e-10!238;UBERON:0000466!1.22e-09!126;UBERON:0005177!2.14e-09!107;UBERON:0000077!3.04e-09!130;UBERON:0005153!4.96e-09!37;UBERON:0004921!6.00e-09!129;UBERON:0004185!6.00e-09!129;UBERON:0005631!8.24e-09!14;UBERON:0000158!8.24e-09!14;UBERON:0000468!9.29e-09!659;UBERON:0000161!1.36e-08!35;UBERON:0005156!1.56e-08!59;UBERON:0000990!1.56e-08!59;UBERON:0005157!1.58e-08!51;UBERON:0000062!1.60e-08!511;UBERON:0005178!2.08e-08!34;UBERON:0002224!2.08e-08!34;UBERON:0005911!2.75e-08!82;UBERON:0003100!3.02e-08!41;UBERON:0002100!4.04e-08!216;UBERON:0003064!4.74e-08!37;UBERON:0005181!8.28e-08!35;UBERON:0000065!9.46e-08!53;UBERON:0000922!1.54e-07!612;UBERON:0007196!1.79e-07!14;UBERON:0001558!1.79e-07!14;UBERON:0000481!2.69e-07!347;UBERON:0000058!4.48e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.05e-09;30!UBERON:0001008;1.05e-09;30!UBERON:0005178;1.97e-08;34!UBERON:0002224;1.97e-08;34!UBERON:0005911;6.08e-08;36!UBERON:0004211;7.93e-08;10!UBERON:0009773;7.93e-08;10!UBERON:0001231;7.93e-08;10!UBERON:0004810;7.93e-08;10!UBERON:0005181;1.23e-07;35!UBERON:0005631;1.78e-07;10!UBERON:0000158;1.78e-07;10!UBERON:0007196;6.34e-07;15!UBERON:0001558;6.34e-07;15!UBERON:0000486;6.76e-07;12!UBERON:0000478;6.94e-07;24!UBERON:0002113;8.07e-07;24!UBERON:0011143;8.07e-07;24!UBERON:0004807;8.84e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.01e-16,160;UBERON:0000925,9.01e-16,160;UBERON:0006595,9.01e-16,160;UBERON:0001008,2.66e-15,48;UBERON:0006554,4.51e-15,47;UBERON:0005177,9.11e-12,101;UBERON:0005631,7.23e-11,14;UBERON:0000158,7.23e-11,14;UBERON:0005153,1.12e-10,37;UBERON:0001004,3.20e-10,74;UBERON:0005911,4.57e-10,82;UBERON:0005178,1.79e-09,34;UBERON:0002224,1.79e-09,34;UBERON:0001007,2.24e-09,145;UBERON:0001555,2.24e-09,145;UBERON:0007026,2.24e-09,145;UBERON:0005181,5.65e-09,35;UBERON:0009569,1.04e-08,112;UBERON:0005157,1.87e-08,47;UBERON:0000161,3.28e-08,36;UBERON:0004810,8.65e-08,10;UBERON:0005156,9.73e-08,59;UBERON:0000990,9.73e-08,59;UBERON:0002113,1.67e-07,26;UBERON:0003918,1.67e-07,26;UBERON:0011143,1.67e-07,26;UBERON:0005095,1.67e-07,26;UBERON:0007687,1.67e-07,26;UBERON:0000915,2.34e-07,52;UBERON:0004921,2.52e-07,118;UBERON:0003100,2.95e-07,41;UBERON:0003124,3.37e-07,7;UBERON:0000065,4.35e-07,54;UBERON:0007196,4.73e-07,15;UBERON:0001558,4.73e-07,15;UBERON:0000478,7.55e-07,24;UBERON:0006555,8.07e-07,16;UBERON:0004819,8.07e-07,16;UBERON:0000489,9.76e-07,31 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0,20.3959167296252,99.0877658520847,26.8682887720112,51.6983277327769,0.495065411840187,0.662794751455832,0,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0.684372125364421,0,0,0,0,0,0,0.464448369948228,34.0185853057203,29.8193859590468,36.2358929963452,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0.449446968890169,0,0,0,0,0.199463657621632,0,2.03146467040009,1.70215567407342,0,0,0,0,1.81619850790011,0.736555271975129,1.26584954976354,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.434539556882471,0.795285947051099,2.43317435151318,0.283604451492204,0.443458794925128,0.43917392846563,2.29213382120997,34.972347676084,37.0784442784429,0,0,0.26591592103773,0,0,0.371457501329565,0.596287222100115,1.72046919021225,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0.805658634218294,0,0.24406205754817,0,1.62028389576352,0.0892997282840798,0,0,0,0,0,0,0,27.9100193371222,0,0,1.05927344650575,0,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,1.24864030732128,0,0.298897361103602,0.23486899728753,0.161872944368132,0,0.408308342509787,0.61417158655884,0.619954687054593,0,0,0,5.74894513452991,0,0,0.831192346452549,0,0.30648779579902,0.300476117813194,0.226864366320042,0,0.213557388818567,0,0,0,0.515281080091258,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.67824236924195,24.3508674985754,23.1834202502209,13.7666205786722,2.5614478287215,1.06023814657188,3.48581828608555,3.52447587052259,4.03713361401005,0,1.56449532329816,0.643240938192885,2.76269842704961,1.39310378409594,2.16563844500876,0.118306800039844,0.505754070234305,0,0.220587945464788,0.435758888184812,0.71181185733329,0,0.196221465125346,0,0,1.40241773803446,1.2347220339942,0,1.26755034821831,0,0,0,5.78045661152634,0.171567810298526,20.6330536568216,25.8524032492525,19.603149620268,23.610053515425,0.651616610620649,0,2.88662684050547,0.927443239800615,0.117408694235822,0.288732895522148,0.462985512576611,0.190254152234598,11.8530659693891,17.1697232418975,1.72351904261178,0.234004265139238,1.33768046059855,29.0574885359009,29.0609081784027,26.3701680870839,28.8378443103171,19.1818399419215,15.3353071666084,0,0.176096868026452,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0.448524337381443,0,0.4400297149257,0.129271715757778,3.57656445851882,0.845302752556,0.26593811658487,3.12022310734098,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0,0.791951872933429,1.80863626235752,2.61460037580088,0.499864955910285,0,0,0,1.4377491329495,3.44585807502342,0,1.01346914667305,0.61642896765115,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0,1.03985430765404,2.67643483195743,1.10391690523754,2.22568688486155,0.300946099727719,0,3.10419213877515,0,0.737476674166813,1.56390506042549,0.587403472388222,0.343143423810856,0,0,0,129.132345436107,91.5394917307734,62.2924004259141,0.248107807818777,0,0,0,0,0,1.48418066444991,0,0.177561725313127,0.328508624055237,1.03850885836724,0,4.10922128611516,29.2739446642796,12.3388525174101,0.114814448164607,1.82091168006717,1.18011973463482,16.2431860646668,11.1672238801401,10.1965469992991,13.1525302187935,5.59423633132241,0,0,0.647747748306418,1.54227252690289,1.35473218771926,7.5253466078228,11.2145560139817,28.2565843035766,9.62661445305367,0.219259876645935,0,0.256450125116389,0.984043937099117,0.650756789328606,4.01859945426117,0,0,22.3963559818507,24.0522291033513,0,0.386682873168488,0,0.15350367472613,0.964856007391714,0.644521469209642,0.580066775656914,0.340906509664404,0,36.0321115486932,31.9035511826076,32.2860162611298,23.4686051584876,0.464845549297286,0.62962469366128,0,0.616067160352178,0,0.869932992075073,0.55597265731176,0.286249773483982,0.372158369359667,0.632758849437452,0.571890581771475,1.535386747868,0.42793898803392,0.318203247925937,1.56989728039846,0.539617372749944,0.274537029736055,0.471249609382746,0.606547444719948,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,1.73632660280006,0.655894752046633,0,0.30982349809975,0.563391205064483,0.143411352204052,0.196498082026242,0.35667105148125,0.709522128141196,1.89996871767898,1.31717957183961,0,0,23.5744176177505,26.1417887458957,34.8451151556232,4.0481834334015,47.3555909938353,62.3344459970215,76.2699864083082,32.8504462295952,0,0,0,0,0,0,0,0,0.534120355637366,0,14.9474531748429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0.73254089635947,0,1.11443384277478,0.852408440419239,38.9153510122435,16.9269868074604,37.7807663582055,0,0,4.22973079087042,0.16480387422676,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| ||
|short_description=p3@SRCAP | |||
}} | }} |
Latest revision as of 09:26, 16 September 2015
Short description: | p3@SRCAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SRCAP_5end |
Coexpression cluster: | C2370_Placental_Alveolar_Urothelial_Amniotic_renal_serous_amniotic |
Association with transcript: | 0bp_to_ENST00000483578_5end |
EntrezGene: | SRCAP |
HGNC: | 16974 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.68e-38 | 253 |
endo-epithelial cell | 1.86e-21 | 42 |
endodermal cell | 6.03e-15 | 58 |
respiratory epithelial cell | 5.12e-11 | 13 |
squamous epithelial cell | 6.37e-11 | 63 |
general ecto-epithelial cell | 2.23e-08 | 14 |
epithelial cell of alimentary canal | 3.28e-08 | 20 |
kidney cell | 6.82e-08 | 17 |
kidney epithelial cell | 6.82e-08 | 17 |
kidney tubule cell | 8.65e-08 | 10 |
nephron tubule epithelial cell | 8.65e-08 | 10 |
extraembryonic cell | 1.46e-07 | 19 |
epithelial cell of tracheobronchial tree | 1.91e-07 | 9 |
epithelial cell of lower respiratory tract | 1.91e-07 | 9 |
ecto-epithelial cell | 5.16e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.57e-10 | 106 |
squamous cell carcinoma | 3.53e-09 | 14 |
adenocarcinoma | 1.45e-07 | 25 |
cell type cancer | 2.05e-07 | 143 |