FFCP PHASE1:Hg19::chr16:57126555..57126564,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:57126555..57126564,+
|short_description=p4@CPNE2
|description=CAGE_peak_4_at_CPNE2_5end
|association_with_transcript=32bp_to_ENST00000535318_5end
|Entrez...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221184 | |EntrezGene=221184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2315 | |HGNC=2315 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000535318_5end | |||
|cluster_id=chr16:57126555..57126564,+ | |||
|description=CAGE_peak_4_at_CPNE2_5end | |||
|id=chr16:57126555..57126564,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.02e-11;2!CL:0002545;3.02e-11;2!CL:0000307;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002545,2.47e-11,2;CL:0000068,7.26e-08,3;CL:0000069,7.26e-08,3;CL:0000307,7.26e-08,3;CL:0000377,7.26e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.53e-21;1!UBERON:0003056;4.52e-08;3!CL:0000377;6.34e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.23e-20!57;UBERON:0005068!5.23e-20!57;UBERON:0006241!5.23e-20!57;UBERON:0007135!5.23e-20!57;UBERON:0001017!2.84e-18!82;UBERON:0005743!1.68e-17!86;UBERON:0000955!8.03e-16!69;UBERON:0006238!8.03e-16!69;UBERON:0002616!8.07e-16!59;UBERON:0000073!1.67e-15!94;UBERON:0001016!1.67e-15!94;UBERON:0001893!2.35e-15!34;UBERON:0002020!7.05e-15!34;UBERON:0003528!7.05e-15!34;UBERON:0003075!1.73e-14!86;UBERON:0007284!1.73e-14!86;UBERON:0002791!2.28e-14!33;UBERON:0002780!3.97e-14!41;UBERON:0001890!3.97e-14!41;UBERON:0006240!3.97e-14!41;UBERON:0003080!1.38e-13!42;UBERON:0001869!1.67e-13!32;UBERON:0002346!3.11e-13!90;UBERON:0000025!2.13e-11!194;UBERON:0007023!9.36e-11!115;UBERON:0000956!1.98e-10!25;UBERON:0000203!1.98e-10!25;UBERON:0000477!7.09e-10!286;UBERON:0002619!7.54e-10!22;UBERON:0004111!2.93e-09!241;UBERON:0000033!6.98e-09!123;UBERON:0003056!7.57e-09!61;UBERON:0000153!2.07e-08!129;UBERON:0007811!2.07e-08!129;UBERON:0001950!2.15e-08!20;UBERON:0003076!7.70e-08!15;UBERON:0003057!7.70e-08!15;UBERON:0004121!1.78e-07!169;UBERON:0002298!4.55e-07!8;UBERON:0000924!5.63e-07!173;UBERON:0006601!5.63e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;8.95e-41;2!UBERON:0000122;8.95e-41;2!UBERON:0000941;1.53e-21;1!UBERON:0001785;1.53e-21;1!UBERON:0002464;1.53e-21;1!UBERON:0004904;1.53e-21;1!UBERON:0001021;1.53e-21;1!UBERON:0002022;4.22e-21;1!UBERON:0002336;4.22e-21;1!UBERON:0011215;4.22e-21;1!UBERON:0001018;4.22e-21;1!UBERON:0002473;4.22e-21;1!UBERON:0005340;4.22e-21;1!UBERON:0003544;4.22e-21;1!UBERON:0005970;4.22e-21;1!UBERON:0002316;4.22e-21;1!UBERON:0001020;4.22e-21;1!UBERON:0002437;4.22e-21;1!UBERON:0003714;1.82e-11;2!UBERON:0002148;3.02e-11;2!UBERON:0005800;3.02e-11;2!UBERON:0006331;3.02e-11;2!UBERON:0009662;3.02e-11;2!UBERON:0001515;3.02e-11;2!UBERON:0000988;6.34e-08;3!UBERON:0004732;4.13e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,4.89e-41,2;UBERON:0000122,4.89e-41,2;UBERON:0000941,1.53e-21,1;UBERON:0001785,1.53e-21,1;UBERON:0002464,1.53e-21,1;UBERON:0004904,1.53e-21,1;UBERON:0001021,1.53e-21,1;UBERON:0003902,1.53e-21,1;UBERON:0005425,1.53e-21,1;UBERON:0002336,2.30e-21,1;UBERON:0011215,2.30e-21,1;UBERON:0001018,2.30e-21,1;UBERON:0002473,2.30e-21,1;UBERON:0005340,2.30e-21,1;UBERON:0003544,2.30e-21,1;UBERON:0005970,2.30e-21,1;UBERON:0002316,2.30e-21,1;UBERON:0001020,2.30e-21,1;UBERON:0002437,2.30e-21,1;UBERON:0002022,5.16e-21,1;UBERON:0003714,1.82e-11,2;UBERON:0005800,2.47e-11,2;UBERON:0001515,2.47e-11,2;UBERON:0002148,4.09e-11,2;UBERON:0006331,4.09e-11,2;UBERON:0009662,4.09e-11,2;UBERON:0000988,7.76e-08,3;UBERON:0001016,1.10e-07,89;UBERON:0004732,4.52e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0.398927315243264,0.426224750532694,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0.488124115096339,0,1.62028389576352,0.17859945656816,0.22452937262617,0.225222960966644,1.53316637465883,0,0.366403487860815,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0.184099797284599,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0.40101294060657,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0.5745161103971,0.423347165447766,0.324621940274555,0,0.456469358066384,0,0,0.169291777801603,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,1.88723172345896,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0.416024019039416,0.694238953340524,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0.264768380074501,0,0,0,0.316553979779393,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0,0.407712618220842,0.313808538937,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,1.09349201984444,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,1.0342636508924,0.13223260174269,0,0.704815022316672,0,0.314408610199332,0,0,0,0,0,0,0.5013797880454,0.612691153526923,0.327872630709804,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0.443716206147409,0.558867626472451,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0,0.438568099157414,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.770750701157514,0,0.478901577171454,0.615349092722265,0.756215088665154,0.553258019713743,0.645902582527404,4.28308260777463,0.392590874004102,0,0,0,0,0,0.596748666348824,0.225630985047772,0.20170506870352,0,0,0.49131575253029,0,0.810451015420736,0.781078098613847,0,0.507326481551255,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0.611727596791485,0.591954962065642,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0.335566295393377,0,0,0,0,0,0.971421986118279,0,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0,0,0.785233868459781,0.594092800654172,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0.157771562193185,0.679914901909147,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0.724030971033267,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0.684466602170562,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0.398927315243264,0.426224750532694,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0.488124115096339,0,1.62028389576352,0.17859945656816,0.22452937262617,0.225222960966644,1.53316637465883,0,0.366403487860815,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0.184099797284599,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0.40101294060657,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0.5745161103971,0.423347165447766,0.324621940274555,0,0.456469358066384,0,0,0.169291777801603,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,1.88723172345896,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0.416024019039416,0.694238953340524,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0.264768380074501,0,0,0,0.316553979779393,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0,0.407712618220842,0.313808538937,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,1.09349201984444,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,1.0342636508924,0.13223260174269,0,0.704815022316672,0,0.314408610199332,0,0,0,0,0,0,0.5013797880454,0.612691153526923,0.327872630709804,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0.443716206147409,0.558867626472451,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0,0.438568099157414,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.770750701157514,0,0.478901577171454,0.615349092722265,0.756215088665154,0.553258019713743,0.645902582527404,4.28308260777463,0.392590874004102,0,0,0,0,0,0.596748666348824,0.225630985047772,0.20170506870352,0,0,0.49131575253029,0,0.810451015420736,0.781078098613847,0,0.507326481551255,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0.611727596791485,0.591954962065642,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0.335566295393377,0,0,0,0,0,0.971421986118279,0,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0,0,0.785233868459781,0.594092800654172,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0.430018749454354,0.157771562193185,0.679914901909147,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0.724030971033267,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0.684466602170562,0,0.143444410785353,0,0,0,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | ||
|short_description=p4@CPNE2 | |||
}} | }} |
Latest revision as of 02:53, 17 September 2015
Short description: | p4@CPNE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CPNE2_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000535318_5end |
EntrezGene: | CPNE2 |
HGNC: | 2315 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic aorta endothelial cell | 2.47e-11 | 2 |
duct epithelial cell | 7.26e-08 | 3 |
branched duct epithelial cell | 7.26e-08 | 3 |
tracheal epithelial cell | 7.26e-08 | 3 |
tracheoblast | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 4.89e-41 | 2 |
neuron projection bundle | 4.89e-41 | 2 |
cranial nerve II | 1.53e-21 | 1 |
cranial nerve | 1.53e-21 | 1 |
nerve trunk | 1.53e-21 | 1 |
nerve connecting eye with brain | 1.53e-21 | 1 |
nerve | 1.53e-21 | 1 |
retinal neural layer | 1.53e-21 | 1 |
presumptive neural retina | 1.53e-21 | 1 |
corpus callosum | 2.30e-21 | 1 |
central nervous system cell part cluster | 2.30e-21 | 1 |
axon tract | 2.30e-21 | 1 |
intercerebral commissure | 2.30e-21 | 1 |
dorsal telencephalic commissure | 2.30e-21 | 1 |
brain white matter | 2.30e-21 | 1 |
brain commissure | 2.30e-21 | 1 |
white matter | 2.30e-21 | 1 |
nervous system commissure | 2.30e-21 | 1 |
cerebral hemisphere white matter | 2.30e-21 | 1 |
insula | 5.16e-21 | 1 |
neural tissue | 1.82e-11 | 2 |
segment of aorta | 2.47e-11 | 2 |
thoracic aorta | 2.47e-11 | 2 |
locus ceruleus | 4.09e-11 | 2 |
brainstem nucleus | 4.09e-11 | 2 |
hindbrain nucleus | 4.09e-11 | 2 |
pons | 7.76e-08 | 3 |
nervous system | 1.10e-07 | 89 |
segmental subdivision of nervous system | 4.52e-07 | 13 |