FFCP PHASE1:Hg19::chr16:57394436..57394449,+: Difference between revisions
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|id=chr16:57394436..57394449,+
|short_description=p@chr16:57394436..57394449,+
|description=CAGE_peak_at_chr16:57394436..57394449,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:57394436..57394449,+ | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_at_chr16:57394436..57394449,+ | |||
|id=chr16:57394436..57394449,+ | |||
|ontology_enrichment_celltype=CL:0000990!2.45e-35!8;CL:0000451!9.15e-29!10;CL:0000453!1.28e-21!5;CL:0000840!7.03e-18!5;CL:0001029!7.03e-18!5;CL:0000738!9.16e-16!140;CL:0002032!3.23e-14!165;CL:0000837!3.23e-14!165;CL:0000988!7.39e-14!182;CL:0000037!1.85e-13!172;CL:0000566!1.85e-13!172;CL:0002031!8.76e-13!124;CL:0000945!4.44e-12!24;CL:0000826!4.44e-12!24;CL:0002087!8.51e-12!119;CL:0000838!2.30e-08!52;CL:0000542!3.51e-08!53;CL:0000051!3.51e-08!53;CL:0000946!1.07e-07!1;CL:0000786!1.07e-07!1;CL:0000980!1.07e-07!1;CL:0000763!3.91e-07!112;CL:0000049!3.91e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000990;2.50e-107;8!CL:0000451;7.43e-88;10!CL:0000453;5.07e-64;5!CL:0000840;6.05e-53;5!CL:0000235;5.01e-14;6!CL:0001014;2.73e-11;2!CL:0001016;2.73e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,2.50e-107,8;CL:0000451,7.43e-88,10;CL:0000453,5.07e-64,5;CL:0000840,6.05e-53,5;CL:0001029,6.05e-53,5;CL:0000763,9.38e-18,108;CL:0000049,9.38e-18,108;CL:0002009,2.32e-15,61;CL:0000738,4.83e-14,136;CL:0000235,5.17e-14,6;CL:0000557,5.46e-14,67;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0002194,9.30e-12,59;CL:0000576,9.30e-12,59;CL:0000040,9.30e-12,59;CL:0000559,9.30e-12,59;CL:0000037,2.70e-11,168;CL:0001014,2.73e-11,2;CL:0001016,2.73e-11,2;CL:0000988,1.07e-10,177;CL:0000839,1.61e-10,66;CL:0000766,1.20e-09,72;CL:0002031,9.66e-08,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!8.28e-08!1;DOID:0050177!8.28e-08!1;DOID:0050427!8.28e-08!1;DOID:0060060!1.58e-07!1;DOID:0060061!1.58e-07!1;DOID:8691!1.58e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!6.05e-09!3;UBERON:0004854!6.05e-09!3;UBERON:0009034!6.05e-09!3;UBERON:0002095!6.05e-09!3;UBERON:0004782!6.05e-09!3;UBERON:0003281!6.05e-09!3;UBERON:0009664!6.05e-09!3;UBERON:0002296!6.05e-09!3;UBERON:0005602!6.05e-09!3;UBERON:0001179!6.05e-09!3;UBERON:0006293!6.05e-09!3;UBERON:0004177!3.15e-08!7;UBERON:0002390!8.49e-08!102;UBERON:0003061!8.49e-08!102;UBERON:0002171!1.48e-07!1;UBERON:0006518!1.48e-07!1;UBERON:0008949!1.48e-07!1;UBERON:0000101!1.48e-07!1;UBERON:0002167!1.48e-07!1;UBERON:0002193!6.81e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.49e-12,76;UBERON:0001474,2.02e-11,82;UBERON:0004765,2.15e-10,90;UBERON:0002405,4.70e-10,93;UBERON:0002390,1.57e-09,98;UBERON:0003061,1.57e-09,98;UBERON:0001434,2.45e-09,100;UBERON:0002193,1.25e-08,108 | |||
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|short_description=p@chr16:57394436..57394449,+ | |||
}} | }} |
Latest revision as of 10:31, 25 July 2015
Short description: | p@chr16:57394436..57394449, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:57394436..57394449, + |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 2.50e-107 | 8 |
dendritic cell | 7.43e-88 | 10 |
Langerhans cell | 5.07e-64 | 5 |
immature conventional dendritic cell | 6.05e-53 | 5 |
common dendritic progenitor | 6.05e-53 | 5 |
myeloid cell | 9.38e-18 | 108 |
common myeloid progenitor | 9.38e-18 | 108 |
macrophage dendritic cell progenitor | 2.32e-15 | 61 |
leukocyte | 4.83e-14 | 136 |
macrophage | 5.17e-14 | 6 |
granulocyte monocyte progenitor cell | 5.46e-14 | 67 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
monopoietic cell | 9.30e-12 | 59 |
monocyte | 9.30e-12 | 59 |
monoblast | 9.30e-12 | 59 |
promonocyte | 9.30e-12 | 59 |
hematopoietic stem cell | 2.70e-11 | 168 |
CD1a-positive Langerhans cell | 2.73e-11 | 2 |
immature CD1a-positive Langerhans cell | 2.73e-11 | 2 |
hematopoietic cell | 1.07e-10 | 177 |
myeloid lineage restricted progenitor cell | 1.61e-10 | 66 |
myeloid leukocyte | 1.20e-09 | 72 |
hematopoietic lineage restricted progenitor cell | 9.66e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.49e-12 | 76 |
bone element | 2.02e-11 | 82 |
skeletal element | 2.15e-10 | 90 |
immune system | 4.70e-10 | 93 |
hematopoietic system | 1.57e-09 | 98 |
blood island | 1.57e-09 | 98 |
skeletal system | 2.45e-09 | 100 |
hemolymphoid system | 1.25e-08 | 108 |