FFCP PHASE1:Hg19::chr7:100136919..100136924,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3268 | |EntrezGene=3268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5177 | |HGNC=5177 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_ENST00000262935_5end | |association_with_transcript=37bp_to_ENST00000262935_5end | ||
|cluster_id=chr7:100136919..100136924,+ | |||
|description=CAGE_peak_4_at_AGFG2_5end | |description=CAGE_peak_4_at_AGFG2_5end | ||
|id=chr7:100136919..100136924,+ | |id=chr7:100136919..100136924,+ | ||
|ontology_enrichment_celltype=CL:0002139!8.56e-07!24 | |ontology_enrichment_celltype=CL:0002139!8.56e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002363;2.31e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,3.62e-12,2;CL:0000008,3.62e-12,2 | |||
|ontology_enrichment_development_v019=CL:0000008;2.31e-12;2!UBERON:0010122;2.31e-12;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.15e-10!115;UBERON:0000477!4.31e-09!286;UBERON:0001049!4.70e-07!57;UBERON:0005068!4.70e-07!57;UBERON:0006241!4.70e-07!57;UBERON:0007135!4.70e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!2.15e-10!115;UBERON:0000477!4.31e-09!286;UBERON:0001049!4.70e-07!57;UBERON:0005068!4.70e-07!57;UBERON:0006241!4.70e-07!57;UBERON:0007135!4.70e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.62e-23;1!UBERON:0001873;2.31e-12;2!UBERON:0003566;2.31e-12;2!UBERON:0001777;2.31e-12;2!UBERON:0002331;8.45e-10;10!UBERON:0001896;1.12e-08;3!UBERON:0005383;1.12e-08;3!UBERON:0005290;1.12e-08;3!UBERON:0005382;1.12e-08;3!UBERON:0002390;6.43e-07;32!UBERON:0000178;7.86e-07;15!UBERON:0000179;7.86e-07;15!UBERON:0000463;7.86e-07;15!UBERON:0000369;8.14e-07;4!UBERON:0002435;8.14e-07;4!UBERON:0003891;8.14e-07;4!UBERON:0000964;8.14e-07;4!UBERON:0010409;8.14e-07;4!UBERON:0000204;8.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.62e-23,1;UBERON:0001873,2.59e-12,2;UBERON:0010122,2.59e-12,2;UBERON:0003566,3.62e-12,2;UBERON:0001777,3.62e-12,2;UBERON:0002331,7.08e-10,10;UBERON:0000358,7.08e-10,10;UBERON:0000307,7.08e-10,10;UBERON:0000091,7.08e-10,10;UBERON:0000087,7.08e-10,10;UBERON:0007010,7.08e-10,10;UBERON:0007806,7.08e-10,10;UBERON:0008780,7.08e-10,10;UBERON:0005728,7.08e-10,10;UBERON:0001896,9.66e-09,3;UBERON:0005290,9.66e-09,3;UBERON:0010096,9.66e-09,3;UBERON:0005383,1.21e-08,3;UBERON:0005382,1.21e-08,3;UBERON:0000178,6.99e-07,15;UBERON:0000179,6.99e-07,15;UBERON:0000463,6.99e-07,15;UBERON:0000369,8.61e-07,4;UBERON:0002435,8.61e-07,4;UBERON:0000204,8.61e-07,4;UBERON:0010082,8.61e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.410502947249729,0.393553906568396,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.087834785693126,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0.81014194788176,0,0,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,1.06748995729705,0,0.933633106199299,0,0.326923806226917,0,0.576175924479999,0,0.624320153660641,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.435758888184812,0.71181185733329,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,1.05658120815871,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.246381468041427,0,0.116210378459959,0.362578348774867,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.255679882248303,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.213648142254946,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.703347082052564,0,0,0,0,0,0.503865495708552,0,0,0,0.179736702294654,0,0,0,0,1.11136990144637,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,1.08536794762867,0,0,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0.593042257361244,1.11207545051853,1.25306339406546,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0.787831823072237,0.576911008668165,0.337017719270924,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.242998226632099,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,1.14681839138014,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0.50313580350515,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0.675769762612291,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0.478901577171454,0,0,0,0.322951291263702,0,0,0,0,0.462102664601353,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.253663240775627,0,0,0,0,0,0,0.336283722218824,0,0,0,0.115233987555779,0.171488009437418,0.203909198930495,0.328863867814245,0,0,0,0.157115589916002,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0.458729283404541,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.20686599172379,0,0,0.0645889098360061,0,0,0,0,0,0,0.202056159043763,0.215166616178029,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0.201273793591026,0 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|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.410502947249729,0.393553906568396,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.087834785693126,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0.81014194788176,0,0,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,1.06748995729705,0,0.933633106199299,0,0.326923806226917,0,0.576175924479999,0,0.624320153660641,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.435758888184812,0.71181185733329,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,1.05658120815871,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.246381468041427,0,0.116210378459959,0.362578348774867,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0.255679882248303,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.213648142254946,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.703347082052564,0,0,0,0,0,0.503865495708552,0,0,0,0.179736702294654,0,0,0,0,1.11136990144637,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,1.08536794762867,0,0,0.295547618953547,0.658156191461918,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0.593042257361244,1.11207545051853,1.25306339406546,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0.787831823072237,0.576911008668165,0.337017719270924,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.242998226632099,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,1.14681839138014,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0.50313580350515,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0.675769762612291,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0.478901577171454,0,0,0,0.322951291263702,0,0,0,0,0.462102664601353,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.253663240775627,0,0,0,0,0,0,0.336283722218824,0,0,0,0.115233987555779,0.171488009437418,0.203909198930495,0.328863867814245,0,0,0,0.157115589916002,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0.458729283404541,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.20686599172379,0,0,0.0645889098360061,0,0,0,0,0,0,0.202056159043763,0.215166616178029,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p4@AGFG2 | |short_description=p4@AGFG2 | ||
}} | }} |
Latest revision as of 07:23, 20 September 2015
Short description: | p4@AGFG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AGFG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENST00000262935_5end |
EntrezGene: | AGFG2 |
HGNC: | 5177 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 3.62e-12 | 2 |
migratory cranial neural crest cell | 3.62e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.62e-23 | 1 |
caudate nucleus | 2.59e-12 | 2 |
future caudate nucleus | 2.59e-12 | 2 |
head connective tissue | 3.62e-12 | 2 |
substantia propria of cornea | 3.62e-12 | 2 |
umbilical cord | 7.08e-10 | 10 |
blastocyst | 7.08e-10 | 10 |
blastula | 7.08e-10 | 10 |
bilaminar disc | 7.08e-10 | 10 |
inner cell mass | 7.08e-10 | 10 |
cleaving embryo | 7.08e-10 | 10 |
connecting stalk | 7.08e-10 | 10 |
inner cell mass derived epiblast | 7.08e-10 | 10 |
extraembryonic mesoderm | 7.08e-10 | 10 |
medulla oblongata | 9.66e-09 | 3 |
myelencephalon | 9.66e-09 | 3 |
future myelencephalon | 9.66e-09 | 3 |
caudate-putamen | 1.21e-08 | 3 |
dorsal striatum | 1.21e-08 | 3 |
blood | 6.99e-07 | 15 |
haemolymphatic fluid | 6.99e-07 | 15 |
organism substance | 6.99e-07 | 15 |
corpus striatum | 8.61e-07 | 4 |
striatum | 8.61e-07 | 4 |
ventral part of telencephalon | 8.61e-07 | 4 |
future corpus striatum | 8.61e-07 | 4 |