FFCP PHASE1:Hg19::chr16:67880779..67880790,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:67880779..67880790,+
|short_description=p2@NUTF2
|description=CAGE_peak_2_at_NUTF2_5end
|association_with_transcript=-28bp_to_NM_005796,uc002eup.2,uc010vk...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10204 | |EntrezGene=10204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13722 | |HGNC=13722 | ||
|TSSclassifier=strong | |||
|UniProt=P61970 | |UniProt=P61970 | ||
|association_with_transcript=-28bp_to_NM_005796,uc002eup.2,uc010vkf.1_5end | |||
|cluster_id=chr16:67880779..67880790,+ | |||
|description=CAGE_peak_2_at_NUTF2_5end | |||
|id=chr16:67880779..67880790,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.34e-27!119;CL:0000548!2.07e-23!679;CL:0000004!2.07e-23!679;CL:0000255!2.07e-23!679;CL:0000220!4.30e-23!246;CL:0000012!1.38e-22!682;CL:0002321!2.84e-22!248;CL:0000144!5.53e-16!625;CL:0000183!1.16e-15!59;CL:0000066!1.93e-15!254;CL:0002371!6.34e-15!591;CL:0000003!2.07e-14!722;CL:0000680!7.46e-14!57;CL:0000056!7.46e-14!57;CL:0000355!7.46e-14!57;CL:0000192!1.66e-13!42;CL:0000514!1.66e-13!42;CL:0000187!1.91e-13!54;CL:0002078!8.59e-13!44;CL:0000055!1.46e-12!180;CL:0000213!2.90e-12!57;CL:0000215!2.90e-12!57;CL:0000115!1.12e-11!35;CL:0000393!1.19e-11!60;CL:0000211!1.19e-11!60;CL:0000359!2.07e-11!32;CL:0002139!1.48e-10!24;CL:0000071!3.00e-09!18;CL:0002546!3.00e-09!18;CL:0000063!2.24e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.38e-10;24!CL:0000359;1.42e-10;32!CL:0000115;2.08e-10;36!CL:0000192;1.74e-09;43!CL:0000071;3.43e-09;18!CL:0002078;9.63e-09;45!CL:0000187;3.32e-08;55!CL:0000213;4.43e-08;58!CL:0000215;4.43e-08;58!CL:1000449;8.43e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.61e-27,121;CL:0002321,1.57e-22,250;CL:0000066,1.36e-15,253;CL:0000680,1.86e-13,58;CL:0000056,1.86e-13,58;CL:0000355,1.86e-13,58;CL:0002078,2.52e-13,45;CL:0000187,4.83e-13,55;CL:0000192,5.11e-13,43;CL:0000514,5.11e-13,43;CL:0000213,9.29e-13,58;CL:0000215,9.29e-13,58;CL:0000115,3.20e-12,36;CL:0000359,2.07e-11,32;CL:0000393,2.54e-11,61;CL:0000211,2.54e-11,61;CL:0002139,1.48e-10,24;CL:0000071,3.00e-09,18;CL:0002546,3.00e-09,18;CL:1000449,7.92e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.74e-09;43!CL:0002546;3.43e-09;18!CL:0000222;6.18e-08;121!CL:0000355;1.20e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.87e-19!79;UBERON:0007798!5.87e-19!79;UBERON:0000055!2.19e-18!69;UBERON:0003914!5.48e-17!118;UBERON:0004872!9.33e-17!84;UBERON:0001981!8.18e-16!60;UBERON:0007500!8.18e-16!60;UBERON:0004537!8.18e-16!60;UBERON:0006965!8.18e-16!60;UBERON:0000490!3.24e-15!138;UBERON:0000486!4.04e-15!82;UBERON:0004290!1.43e-13!70;UBERON:0001637!1.61e-13!42;UBERON:0003509!1.61e-13!42;UBERON:0004572!1.61e-13!42;UBERON:0004535!1.70e-13!110;UBERON:0001009!1.87e-13!113;UBERON:0005256!2.47e-13!143;UBERON:0000914!4.17e-13!83;UBERON:0002329!4.17e-13!83;UBERON:0003077!4.17e-13!83;UBERON:0003059!4.17e-13!83;UBERON:0007282!4.17e-13!83;UBERON:0009618!4.17e-13!83;UBERON:0007285!4.17e-13!83;UBERON:0002100!1.19e-12!216;UBERON:0001134!2.65e-12!61;UBERON:0002036!2.65e-12!61;UBERON:0003082!2.65e-12!61;UBERON:0003104!5.45e-12!238;UBERON:0009142!5.45e-12!238;UBERON:0002385!1.81e-11!63;UBERON:0001015!1.81e-11!63;UBERON:0000383!1.81e-11!63;UBERON:0004573!1.53e-10!33;UBERON:0004571!1.53e-10!33;UBERON:0000487!7.45e-10!22;UBERON:0006914!1.32e-09!25;UBERON:0001986!3.00e-09!18;UBERON:0004638!3.00e-09!18;UBERON:0004852!3.00e-09!18;UBERON:0000926!1.86e-07!448;UBERON:0004120!1.86e-07!448;UBERON:0006603!1.86e-07!448;UBERON:0000119!2.40e-07!312;UBERON:0000483!6.56e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.52e-11;74!UBERON:0007500;1.91e-10;56!UBERON:0001981;1.91e-10;56!UBERON:0004537;1.91e-10;56!UBERON:0000487;8.44e-10;22!UBERON:0004573;8.86e-10;33!UBERON:0004571;8.86e-10;33!UBERON:0001637;8.94e-10;42!UBERON:0003509;8.94e-10;42!UBERON:0004572;8.94e-10;42!UBERON:0000055;1.34e-09;65!UBERON:0006914;1.77e-09;25!UBERON:0004638;3.43e-09;18!UBERON:0001986;3.43e-09;18!UBERON:0004852;3.43e-09;18!UBERON:0002049;4.58e-09;75!UBERON:0007798;4.58e-09;75!UBERON:0000490;4.42e-08;33!UBERON:0000025;2.77e-07;93!UBERON:0001851;4.87e-07;15!UBERON:0000353;6.42e-07;15!UBERON:0006555;8.43e-07;15!UBERON:0004819;8.43e-07;15!UBERON:0001285;8.43e-07;15!UBERON:0007684;8.43e-07;15 | |||
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| ||
|short_description=p2@NUTF2 | |||
}} | }} |
Latest revision as of 12:13, 17 September 2015
Short description: | p2@NUTF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NUTF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_NM_005796, uc002eup.2, uc010vkf.1_5end |
EntrezGene: | NUTF2 |
HGNC: | 13722 |
UniProt: | P61970 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.61e-27 | 121 |
embryonic cell | 1.57e-22 | 250 |
epithelial cell | 1.36e-15 | 253 |
muscle precursor cell | 1.86e-13 | 58 |
myoblast | 1.86e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.86e-13 | 58 |
meso-epithelial cell | 2.52e-13 | 45 |
muscle cell | 4.83e-13 | 55 |
smooth muscle cell | 5.11e-13 | 43 |
smooth muscle myoblast | 5.11e-13 | 43 |
lining cell | 9.29e-13 | 58 |
barrier cell | 9.29e-13 | 58 |
endothelial cell | 3.20e-12 | 36 |
vascular associated smooth muscle cell | 2.07e-11 | 32 |
electrically responsive cell | 2.54e-11 | 61 |
electrically active cell | 2.54e-11 | 61 |
endothelial cell of vascular tree | 1.48e-10 | 24 |
blood vessel endothelial cell | 3.00e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.00e-09 | 18 |
epithelial cell of nephron | 7.92e-07 | 15 |