FFCP PHASE1:Hg19::chr7:93518433..93518444,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:93518433..93518444,- | |||
|coexpression_cluster_id=C378 | |||
|description=CAGE_peak_at_chr7:93518433..93518444,- | |description=CAGE_peak_at_chr7:93518433..93518444,- | ||
|id=chr7:93518433..93518444,- | |id=chr7:93518433..93518444,- | ||
|ontology_enrichment_celltype=CL:0000359!9.75e-13!32;CL:0000192!1.19e-11!42;CL:0000514!1.19e-11!42;CL:0000680!1.23e-10!57;CL:0000056!1.23e-10!57;CL:0000355!1.23e-10!57;CL:0000187!3.08e-10!54;CL:0000183!4.94e-10!59;CL:0000393!1.00e-08!60;CL:0000211!1.00e-08!60;CL:0002595!2.74e-08!5;CL:0000055!3.08e-08!180;CL:0002494!8.93e-08!16;CL:0002592!9.82e-08!3 | |ontology_enrichment_celltype=CL:0000359!9.75e-13!32;CL:0000192!1.19e-11!42;CL:0000514!1.19e-11!42;CL:0000680!1.23e-10!57;CL:0000056!1.23e-10!57;CL:0000355!1.23e-10!57;CL:0000187!3.08e-10!54;CL:0000183!4.94e-10!59;CL:0000393!1.00e-08!60;CL:0000211!1.00e-08!60;CL:0002595!2.74e-08!5;CL:0000055!3.08e-08!180;CL:0002494!8.93e-08!16;CL:0002592!9.82e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.17e-26;32!CL:0002595;9.00e-22;5!CL:0002592;2.03e-16;3!CL:0000192;5.31e-14;43!CL:0000511;6.05e-13;1!CL:0002625;6.05e-13;1!CL:0000216;6.05e-13;1!CL:0002594;1.47e-12;4!CL:0000187;7.43e-09;55!CL:0000393;1.70e-07;61!CL:0000211;1.70e-07;61!CL:0002593;2.15e-07;2!CL:0002596;2.66e-07;2!CL:0002589;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.77e-28,32;CL:0002595,4.76e-22,5;CL:0000192,5.99e-21,43;CL:0000514,5.99e-21,43;CL:0002592,1.49e-16,3;CL:0000187,3.69e-16,55;CL:0000680,2.86e-15,58;CL:0000056,2.86e-15,58;CL:0000355,2.86e-15,58;CL:0000393,1.81e-14,61;CL:0000211,1.81e-14,61;CL:0000511,4.77e-13,1;CL:0002625,4.77e-13,1;CL:0000216,4.77e-13,1;CL:0002594,2.35e-12,4;CL:0000222,3.09e-10,121;CL:0002593,2.15e-07,2;CL:0002596,2.58e-07,2;CL:0002589,4.42e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;5.31e-14;43!UBERON:0003124;2.46e-13;1!CL:0000355;5.94e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!7.87e-12!14;DOID:120!7.12e-08!27;DOID:193!3.67e-07!29 | |ontology_enrichment_disease=DOID:2394!7.87e-12!14;DOID:120!7.12e-08!27;DOID:193!3.67e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:4468;2.66e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.74e-07,2 | |||
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|short_description=p@chr7:93518433..93518444,- | |short_description=p@chr7:93518433..93518444,- | ||
}} | }} |
Latest revision as of 12:36, 31 July 2015
Short description: | p@chr7:93518433..93518444, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:93518433..93518444, - |
Coexpression cluster: | C378_Smooth_mesenchymal_placenta_clear_leiomyoma_renal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.77e-28 | 32 |
smooth muscle cell of the subclavian artery | 4.76e-22 | 5 |
smooth muscle cell | 5.99e-21 | 43 |
smooth muscle myoblast | 5.99e-21 | 43 |
smooth muscle cell of the coronary artery | 1.49e-16 | 3 |
muscle cell | 3.69e-16 | 55 |
muscle precursor cell | 2.86e-15 | 58 |
myoblast | 2.86e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.86e-15 | 58 |
electrically responsive cell | 1.81e-14 | 61 |
electrically active cell | 1.81e-14 | 61 |
androgen binding protein secreting cell | 4.77e-13 | 1 |
seminiferous tubule epithelial cell | 4.77e-13 | 1 |
Sertoli cell | 4.77e-13 | 1 |
smooth muscle cell of the umbilical artery | 2.35e-12 | 4 |
mesodermal cell | 3.09e-10 | 121 |
smooth muscle cell of the internal thoracic artery | 2.15e-07 | 2 |
smooth muscle cell of the carotid artery | 2.58e-07 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.74e-07 | 2 |