FFCP PHASE1:Hg19::chr10:102747200..102747278,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84545 | |EntrezGene=84545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14517 | |HGNC=14517 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N983,C9J5Q3,B1AL05,B1AL06,A8K4V4,B1AL08 | |UniProt=Q8N983,C9J5Q3,B1AL05,B1AL06,A8K4V4,B1AL08 | ||
|association_with_transcript=0bp_to_ENST00000299179,ENST00000318325,ENST00000318364,ENST00000342071,ENST00000370234,ENST00000370236,ENST00000370241,ENST00000370242,ENST00000477279,ENST00000487059,NM_032112,NM_176792,NM_176793,NM_176794,uc001kry.1,uc001ksa.1,uc001ksb.1,uc001ksc.2,uc001ksd.1,uc001kse.2,uc010qpu.1_5end | |association_with_transcript=0bp_to_ENST00000299179,ENST00000318325,ENST00000318364,ENST00000342071,ENST00000370234,ENST00000370236,ENST00000370241,ENST00000370242,ENST00000477279,ENST00000487059,NM_032112,NM_176792,NM_176793,NM_176794,uc001kry.1,uc001ksa.1,uc001ksb.1,uc001ksc.2,uc001ksd.1,uc001kse.2,uc010qpu.1_5end | ||
|cluster_id=chr10:102747200..102747278,- | |||
|description=CAGE_peak_1_at_MRPL43_5end | |description=CAGE_peak_1_at_MRPL43_5end | ||
|id=chr10:102747200..102747278,- | |id=chr10:102747200..102747278,- | ||
|ontology_enrichment_celltype=CL:0000055!1.29e-17!180;CL:0000220!7.07e-15!246;CL:0002321!1.63e-14!248;CL:0000222!5.00e-14!119;CL:0000183!1.94e-12!59;CL:0000393!1.30e-11!60;CL:0000211!1.30e-11!60;CL:0000680!1.06e-10!57;CL:0000056!1.06e-10!57;CL:0000355!1.06e-10!57;CL:0000187!2.74e-10!54;CL:0000192!4.81e-10!42;CL:0000514!4.81e-10!42;CL:0000066!4.03e-09!254;CL:0000548!1.91e-08!679;CL:0000004!1.91e-08!679;CL:0000255!1.91e-08!679;CL:1000497!5.63e-08!18;CL:0002518!5.63e-08!18;CL:0000012!7.21e-08!682;CL:0000359!8.75e-08!32;CL:1000449!1.19e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.29e-17!180;CL:0000220!7.07e-15!246;CL:0002321!1.63e-14!248;CL:0000222!5.00e-14!119;CL:0000183!1.94e-12!59;CL:0000393!1.30e-11!60;CL:0000211!1.30e-11!60;CL:0000680!1.06e-10!57;CL:0000056!1.06e-10!57;CL:0000355!1.06e-10!57;CL:0000187!2.74e-10!54;CL:0000192!4.81e-10!42;CL:0000514!4.81e-10!42;CL:0000066!4.03e-09!254;CL:0000548!1.91e-08!679;CL:0000004!1.91e-08!679;CL:0000255!1.91e-08!679;CL:1000497!5.63e-08!18;CL:0002518!5.63e-08!18;CL:0000012!7.21e-08!682;CL:0000359!8.75e-08!32;CL:1000449!1.19e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.43e-08;17!CL:0002518;1.43e-08;17!CL:1000449;2.83e-08;15!CL:0000359;2.10e-07;32!CL:0000192;2.80e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.41e-14,250;CL:0000222,5.13e-14,121;CL:0000393,2.56e-11,61;CL:0000211,2.56e-11,61;CL:0000680,2.06e-10,58;CL:0000056,2.06e-10,58;CL:0000355,2.06e-10,58;CL:0000187,5.33e-10,55;CL:0000192,1.06e-09,43;CL:0000514,1.06e-09,43;CL:0000066,3.28e-09,253;CL:1000497,1.44e-08,17;CL:0002518,1.44e-08,17;CL:1000449,2.80e-08,15;CL:0000359,8.75e-08,32 | |||
|ontology_enrichment_development_v019=CL:0000514;2.80e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.87e-16!143;UBERON:0003104!9.24e-16!238;UBERON:0009142!9.24e-16!238;UBERON:0002100!1.46e-14!216;UBERON:0000481!1.46e-13!347;UBERON:0000914!1.95e-13!83;UBERON:0002329!1.95e-13!83;UBERON:0003077!1.95e-13!83;UBERON:0003059!1.95e-13!83;UBERON:0007282!1.95e-13!83;UBERON:0009618!1.95e-13!83;UBERON:0007285!1.95e-13!83;UBERON:0000486!1.45e-12!82;UBERON:0004290!2.56e-12!70;UBERON:0000475!1.18e-11!365;UBERON:0001134!7.83e-11!61;UBERON:0002036!7.83e-11!61;UBERON:0003082!7.83e-11!61;UBERON:0000490!8.09e-11!138;UBERON:0003914!9.18e-11!118;UBERON:0002385!2.59e-10!63;UBERON:0001015!2.59e-10!63;UBERON:0000383!2.59e-10!63;UBERON:0000119!2.92e-10!312;UBERON:0002049!5.20e-10!79;UBERON:0007798!5.20e-10!79;UBERON:0000483!1.19e-09!309;UBERON:0004872!9.00e-09!84;UBERON:0000055!2.32e-08!69;UBERON:0001981!4.78e-08!60;UBERON:0007500!4.78e-08!60;UBERON:0004537!4.78e-08!60;UBERON:0006965!4.78e-08!60;UBERON:0001637!9.02e-08!42;UBERON:0003509!9.02e-08!42;UBERON:0004572!9.02e-08!42;UBERON:0004876!9.93e-08!20;UBERON:0000477!1.04e-07!286;UBERON:0004211!1.19e-07!16;UBERON:0001285!1.19e-07!16;UBERON:0007684!1.19e-07!16;UBERON:0003220!1.19e-07!16;UBERON:0004208!1.19e-07!16;UBERON:0000080!1.26e-07!18;UBERON:0002120!1.26e-07!18;UBERON:0004875!1.26e-07!18;UBERON:0005721!1.26e-07!18;UBERON:0005754!1.26e-07!18;UBERON:0007297!1.26e-07!18;UBERON:0006555!1.59e-07!17;UBERON:0005103!1.59e-07!17;UBERON:0000083!1.59e-07!17;UBERON:0009201!1.59e-07!17;UBERON:0004819!1.59e-07!17;UBERON:0006553!1.59e-07!17;UBERON:0003074!1.59e-07!17;UBERON:0003060!1.59e-07!17;UBERON:0003103!2.03e-07!69;UBERON:0006554!6.31e-07!44 | |ontology_enrichment_uberon=UBERON:0005256!1.87e-16!143;UBERON:0003104!9.24e-16!238;UBERON:0009142!9.24e-16!238;UBERON:0002100!1.46e-14!216;UBERON:0000481!1.46e-13!347;UBERON:0000914!1.95e-13!83;UBERON:0002329!1.95e-13!83;UBERON:0003077!1.95e-13!83;UBERON:0003059!1.95e-13!83;UBERON:0007282!1.95e-13!83;UBERON:0009618!1.95e-13!83;UBERON:0007285!1.95e-13!83;UBERON:0000486!1.45e-12!82;UBERON:0004290!2.56e-12!70;UBERON:0000475!1.18e-11!365;UBERON:0001134!7.83e-11!61;UBERON:0002036!7.83e-11!61;UBERON:0003082!7.83e-11!61;UBERON:0000490!8.09e-11!138;UBERON:0003914!9.18e-11!118;UBERON:0002385!2.59e-10!63;UBERON:0001015!2.59e-10!63;UBERON:0000383!2.59e-10!63;UBERON:0000119!2.92e-10!312;UBERON:0002049!5.20e-10!79;UBERON:0007798!5.20e-10!79;UBERON:0000483!1.19e-09!309;UBERON:0004872!9.00e-09!84;UBERON:0000055!2.32e-08!69;UBERON:0001981!4.78e-08!60;UBERON:0007500!4.78e-08!60;UBERON:0004537!4.78e-08!60;UBERON:0006965!4.78e-08!60;UBERON:0001637!9.02e-08!42;UBERON:0003509!9.02e-08!42;UBERON:0004572!9.02e-08!42;UBERON:0004876!9.93e-08!20;UBERON:0000477!1.04e-07!286;UBERON:0004211!1.19e-07!16;UBERON:0001285!1.19e-07!16;UBERON:0007684!1.19e-07!16;UBERON:0003220!1.19e-07!16;UBERON:0004208!1.19e-07!16;UBERON:0000080!1.26e-07!18;UBERON:0002120!1.26e-07!18;UBERON:0004875!1.26e-07!18;UBERON:0005721!1.26e-07!18;UBERON:0005754!1.26e-07!18;UBERON:0007297!1.26e-07!18;UBERON:0006555!1.59e-07!17;UBERON:0005103!1.59e-07!17;UBERON:0000083!1.59e-07!17;UBERON:0009201!1.59e-07!17;UBERON:0004819!1.59e-07!17;UBERON:0006553!1.59e-07!17;UBERON:0003074!1.59e-07!17;UBERON:0003060!1.59e-07!17;UBERON:0003103!2.03e-07!69;UBERON:0006554!6.31e-07!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.83e-08;15!UBERON:0004819;2.83e-08;15!UBERON:0001285;2.83e-08;15!UBERON:0007684;2.83e-08;15!UBERON:0006554;2.94e-07;30!UBERON:0001008;2.94e-07;30!UBERON:0000353;5.93e-07;15!UBERON:0002113;6.34e-07;24!UBERON:0011143;6.34e-07;24 | |||
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| ||
|short_description=p1@MRPL43 | |short_description=p1@MRPL43 | ||
}} | }} |
Latest revision as of 22:21, 15 September 2015
Short description: | p1@MRPL43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL43_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000299179, ENST00000318325, ENST00000318364, ENST00000342071, ENST00000370234, ENST00000370236, ENST00000370241, ENST00000370242, ENST00000477279, ENST00000487059, NM_032112, NM_176792, NM_176793, NM_176794, uc001kry.1, uc001ksa.1, uc001ksb.1, uc001ksc.2, uc001ksd.1, uc001kse.2, uc010qpu.1_5end |
EntrezGene: | MRPL43 |
HGNC: | 14517 |
UniProt: | Q8N983C9J5Q3B1AL05B1AL06A8K4V4B1AL08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.41e-14 | 250 |
mesodermal cell | 5.13e-14 | 121 |
electrically responsive cell | 2.56e-11 | 61 |
electrically active cell | 2.56e-11 | 61 |
muscle precursor cell | 2.06e-10 | 58 |
myoblast | 2.06e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.06e-10 | 58 |
muscle cell | 5.33e-10 | 55 |
smooth muscle cell | 1.06e-09 | 43 |
smooth muscle myoblast | 1.06e-09 | 43 |
epithelial cell | 3.28e-09 | 253 |
kidney cell | 1.44e-08 | 17 |
kidney epithelial cell | 1.44e-08 | 17 |
epithelial cell of nephron | 2.80e-08 | 15 |
vascular associated smooth muscle cell | 8.75e-08 | 32 |