FFCP PHASE1:Hg19::chr16:84402098..84402166,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:84402098..84402166,+
|short_description=p1@ATP2C2
|description=CAGE_peak_1_at_ATP2C2_5end
|association_with_transcript=0bp_to_ENST00000262429,ENST00000416...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9914 | |EntrezGene=9914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29103 | |HGNC=29103 | ||
|TSSclassifier=strong | |||
|UniProt=O75185,E7ES94,Q5HYC3 | |UniProt=O75185,E7ES94,Q5HYC3 | ||
|association_with_transcript=0bp_to_ENST00000262429,ENST00000416219,NM_014861,uc002fhx.2,uc010chj.2_5end | |||
|cluster_id=chr16:84402098..84402166,+ | |||
|description=CAGE_peak_1_at_ATP2C2_5end | |||
|id=chr16:84402098..84402166,+ | |||
|ontology_enrichment_celltype=CL:0002076!7.65e-19!43;CL:0000223!5.34e-14!59;CL:0002368!2.74e-11!13;CL:0000066!5.97e-11!254;CL:0002251!1.05e-07!21;CL:0002202!2.20e-07!9;CL:0002632!2.20e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.72e-15;42!CL:0002368;2.94e-13;13!CL:0002202;5.57e-08;9!CL:0002632;5.57e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.75e-19,42;CL:0000223,1.91e-15,58;CL:0002368,2.71e-13,13;CL:0000066,5.67e-12,253;CL:0002202,5.40e-08,9;CL:0002632,5.40e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000223;6.82e-09;58!UBERON:0006595;9.23e-09;86 | |||
|ontology_enrichment_disease=DOID:305!5.55e-13!106;DOID:1749!2.25e-12!14;DOID:0050687!4.03e-08!143;DOID:299!1.36e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.93e-11;14!DOID:299;4.64e-10;25!DOID:5093;1.79e-07;4!DOID:1612;1.79e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.78e-15,106;DOID:0050687,4.59e-11,143;DOID:1749,5.20e-11,14;DOID:299,4.05e-10,25;DOID:5093,1.85e-07,4;DOID:1612,1.85e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.66e-22!169;UBERON:0000925!1.66e-22!169;UBERON:0006595!1.66e-22!169;UBERON:0001007!1.28e-18!155;UBERON:0001555!1.28e-18!155;UBERON:0007026!1.28e-18!155;UBERON:0004921!1.81e-16!129;UBERON:0004185!1.81e-16!129;UBERON:0001004!2.08e-12!72;UBERON:0000077!5.50e-12!130;UBERON:0000464!1.99e-11!104;UBERON:0007023!4.04e-11!115;UBERON:0005911!6.82e-11!82;UBERON:0000466!3.93e-10!126;UBERON:0005178!6.46e-10!34;UBERON:0002224!6.46e-10!34;UBERON:0000161!1.20e-09!35;UBERON:0005181!1.95e-09!35;UBERON:0000065!2.39e-09!53;UBERON:0000062!1.23e-08!511;UBERON:0005153!1.69e-08!37;UBERON:0000481!2.06e-08!347;UBERON:0000064!2.09e-08!219;UBERON:0000915!4.20e-08!52;UBERON:0001046!1.37e-07!19;UBERON:0002048!1.58e-07!22;UBERON:0000117!1.58e-07!22;UBERON:0000171!1.58e-07!22;UBERON:0000170!1.58e-07!22;UBERON:0005597!1.58e-07!22;UBERON:0000118!1.58e-07!22;UBERON:0000344!1.63e-07!12;UBERON:0001041!2.10e-07!98;UBERON:0005409!3.96e-07!35;UBERON:0000922!4.47e-07!612;UBERON:0000468!6.20e-07!659;UBERON:0001008!7.19e-07!45;UBERON:0007196!7.88e-07!14;UBERON:0001558!7.88e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.30e-16;33!UBERON:0005409;1.21e-14;22!UBERON:0000160;5.26e-13;17!UBERON:0001555;3.37e-08;54!UBERON:0002108;1.00e-07;4!UBERON:0007196;2.26e-07;15!UBERON:0001558;2.26e-07;15!UBERON:0005178;2.45e-07;34!UBERON:0002224;2.45e-07;34!UBERON:0000059;3.41e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.66e-26,160;UBERON:0000925,5.66e-26,160;UBERON:0006595,5.66e-26,160;UBERON:0001007,1.61e-21,145;UBERON:0001555,1.61e-21,145;UBERON:0007026,1.61e-21,145;UBERON:0004921,5.41e-21,118;UBERON:0000160,4.81e-13,17;UBERON:0005409,1.79e-12,25;UBERON:0001004,2.94e-11,74;UBERON:0005911,1.51e-09,82;UBERON:0001046,1.76e-09,19;UBERON:0000161,2.30e-09,36;UBERON:0001041,1.85e-08,87;UBERON:0000065,2.01e-08,54;UBERON:0005178,3.42e-08,34;UBERON:0002224,3.42e-08,34;UBERON:0005181,7.75e-08,35;UBERON:0002108,8.35e-08,4;UBERON:0007196,2.22e-07,15;UBERON:0001558,2.22e-07,15;UBERON:0000915,2.88e-07,52;UBERON:0005156,3.03e-07,59;UBERON:0000990,3.03e-07,59;UBERON:0000059,3.52e-07,11;UBERON:0005153,4.15e-07,37;UBERON:0011216,5.31e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.44027511102112,20.9340350391728,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0.919421224478927,3.614471025339,14.0506523863379,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0.639337125799041,0,0,0,0,0,1.24564449799115,0,0,0,3.63239701580021,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,2.63560834872127,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,1.09098448236334,0.860413786167011,0.975789649036763,0.662648841607426,0.464775771478074,0.310983165046111,0,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.411491295897,0,0,1.1240175325762,0.804231779293047,0.462942225792648,0,0,0,0,0,0,0,0,7.90204397959275,4.29243081047436,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,1.49801404789436,2.99161459204025,4.97298616123243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88898862672247,0.802025881213139,14.4567152629357,0,0,0,4.06079651616671,1.15523005656622,1.56869953835371,0,0.211103257785751,0,0,0,0,0,0,4.33289664176565,14.1282921517883,0.671624264166535,0,0,0,0,0,4.32772248920434,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7766815298001,7.68760269460425,6.38063562472921,13.7574581963548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71488352355009,5.3624182042863,7.62236894029258,4.14232723417828,0.86101074534246,3.36942951335251,4.43430153536676,2.98640420269047,0,0,0,0,0,0,0,0.79312517629427,0,0,4.41072388765857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.98849729306303,0,0,0,0,0,0.296964680832639,0,0,0.703347082052564,0,0,0.211125408127993,6.17668763578316,6.3545300572164,2.51932747854276,0,0,0,11.7727540002998,13.4265881006707,0,1.28236427328014,0,0,0,0,0,33.5951811799951,28.5119599987598,0.724999575434793,6.94140034541548,9.91589236141789,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,3.34616986268648,1.15425387755696,0,14.2949620720597,3.14151755434202,11.0820319360448,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,6.36088821452734,0,47.7725726917682,18.3107158521912,20.7750249277433,0,0,0,0.202203398942031,0,0,0,5.28294471116642,0,1.18375320854817,9.67925728389311,0.61214552326098,0,0,0,0,0,0,0,2.27687636823834,0,1.21491816834592,3.62571870433197,2.87295381715328,1.39781334593624,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0.126621591911757,2.15106521008283,0.320635281006135,15.5820686159727,0,4.7549837660855,0,0,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0,0,0.0671834724867263,0,10.4846354574708,0,0,0,0,0,0,0.272406812223151,1.12527203925513,0.275078873194468,0,1.5748172408605,17.7974449548328,0.121499113316049,1.34173875039706,0.945668487590378,0.577000469484979,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.517131825446202,0.13223260174269,0,2.81926008926669,10.0380167813633,30.0260222740362,21.126191822707,0,0,0,6.38341257770182,0,0,0,0,25.7568717850384,0,0.244052529803926,0.3755727921195,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,51.560158099505,0,0,0,0,0,5.59518030877778,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.192687675289379,0,0.159633859057151,0,1.51243017733031,0.345786262321089,0.484426936895553,0,3.63146558453795,3.30315225373673,1.28400018965175,0.924205329202706,0,0,0,0.977734268540344,0,0,7.33338744547983,0,5.76638736246476,0.270150338473579,1.56215619722769,0.413373593002368,0.253663240775627,0.546974809018219,1.09651553371436,3.96968942711435,0,10.093231783528,0,0,1.82089681270989,2.27662191351298,3.193285325855,0,0,0.0679697329768317,0.263091094251396,1.30013224972365,4.11556187000656,6.35794052089164,0,8.40816489941367,49.3105709075128,0,0,0.214429632529969,0,0,0,0,0,0,1.38251932362818,33.5577339879817,0,0,0,1.60374807980835,0,0,1.23040974977572,16.5873894809761,1.5849330247695,0.647428837187895,0,0,9.71421986118279,3.74303141539369,0,0,0.5647304101948,0,2.41540549706678,11.113078767544,4.37119121007915,39.0363355980064,0,55.3839885688821,0,0,0,0,0,0.322289439867886,0,4.6424024037471,21.5265871746572,4.41327516790425,2.92134555298607,1.83491713361816,0,0,0,1.74540276136151,5.290268405154,0,0,0,0,0,0,2.44773191380756,0,1.10273879441814,0.250707539292375,0.303114792872958,0,0,0.103432995861895,5.5440835294255,9.76064169001335,0,0.186224142887574,0,5.02812550397503,18.1905470062397,1.52401723527873,1.71116650542641,6.06168477131288,19.0781066344519,16.3003574707547,4.5585830422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| ||
|short_description=p1@ATP2C2 | |||
}} | }} |
Latest revision as of 03:46, 18 September 2015
Short description: | p1@ATP2C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP2C2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000262429, ENST00000416219, NM_014861, uc002fhx.2, uc010chj.2_5end |
EntrezGene: | ATP2C2 |
HGNC: | 29103 |
UniProt: | O75185E7ES94Q5HYC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.75e-19 | 42 |
endodermal cell | 1.91e-15 | 58 |
respiratory epithelial cell | 2.71e-13 | 13 |
epithelial cell | 5.67e-12 | 253 |
epithelial cell of tracheobronchial tree | 5.40e-08 | 9 |
epithelial cell of lower respiratory tract | 5.40e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.66e-26 | 160 |
endoderm | 5.66e-26 | 160 |
presumptive endoderm | 5.66e-26 | 160 |
digestive system | 1.61e-21 | 145 |
digestive tract | 1.61e-21 | 145 |
primitive gut | 1.61e-21 | 145 |
subdivision of digestive tract | 5.41e-21 | 118 |
intestine | 4.81e-13 | 17 |
gastrointestinal system | 1.79e-12 | 25 |
respiratory system | 2.94e-11 | 74 |
endo-epithelium | 1.51e-09 | 82 |
hindgut | 1.76e-09 | 19 |
orifice | 2.30e-09 | 36 |
foregut | 1.85e-08 | 87 |
respiratory tract | 2.01e-08 | 54 |
thoracic cavity element | 3.42e-08 | 34 |
thoracic cavity | 3.42e-08 | 34 |
thoracic segment organ | 7.75e-08 | 35 |
small intestine | 8.35e-08 | 4 |
tracheobronchial tree | 2.22e-07 | 15 |
lower respiratory tract | 2.22e-07 | 15 |
thoracic segment of trunk | 2.88e-07 | 52 |
reproductive structure | 3.03e-07 | 59 |
reproductive system | 3.03e-07 | 59 |
large intestine | 3.52e-07 | 11 |
epithelial bud | 4.15e-07 | 37 |
organ system subdivision | 5.31e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.78e-15 | 106 |
cell type cancer | 4.59e-11 | 143 |
squamous cell carcinoma | 5.20e-11 | 14 |
adenocarcinoma | 4.05e-10 | 25 |
thoracic cancer | 1.85e-07 | 4 |
breast cancer | 1.85e-07 | 4 |