FFCP PHASE1:Hg19::chr8:72756325..72756412,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100132891 | |EntrezGene=100132891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000457356,ENST00000518916,ENST00000519751,NR_033651_5end | |association_with_transcript=0bp_to_ENST00000457356,ENST00000518916,ENST00000519751,NR_033651_5end | ||
|cluster_id=chr8:72756325..72756412,+ | |||
|description=CAGE_peak_1_at_LOC100132891_5end | |description=CAGE_peak_1_at_LOC100132891_5end | ||
|id=chr8:72756325..72756412,+ | |id=chr8:72756325..72756412,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.03e-23!180;CL:0000057!1.08e-16!75;CL:0000048!5.12e-14!430;CL:0000723!1.43e-13!436;CL:0000034!4.72e-12!444;CL:0000680!1.23e-09!57;CL:0000056!1.23e-09!57;CL:0000355!1.23e-09!57;CL:0000219!3.59e-09!390;CL:0000187!3.95e-09!54;CL:0000134!1.84e-08!358;CL:0002320!6.43e-08!365;CL:0000183!2.06e-07!59;CL:0000136!5.11e-07!15;CL:0000393!7.56e-07!60;CL:0000211!7.56e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.03e-23!180;CL:0000057!1.08e-16!75;CL:0000048!5.12e-14!430;CL:0000723!1.43e-13!436;CL:0000034!4.72e-12!444;CL:0000680!1.23e-09!57;CL:0000056!1.23e-09!57;CL:0000355!1.23e-09!57;CL:0000219!3.59e-09!390;CL:0000187!3.95e-09!54;CL:0000134!1.84e-08!358;CL:0002320!6.43e-08!365;CL:0000183!2.06e-07!59;CL:0000136!5.11e-07!15;CL:0000393!7.56e-07!60;CL:0000211!7.56e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000057;3.05e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.28e-17,76;CL:0000048,1.14e-15,427;CL:0000723,4.42e-15,433;CL:0000034,3.34e-13,441;CL:0000219,2.71e-10,386;CL:0000680,5.39e-10,58;CL:0000056,5.39e-10,58;CL:0000355,5.39e-10,58;CL:0000134,9.34e-10,354;CL:0000187,1.78e-09,55;CL:0002320,6.51e-09,361;CL:0000136,3.85e-07,15;CL:0000393,7.59e-07,61;CL:0000211,7.59e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.22e-10!83;UBERON:0002329!1.22e-10!83;UBERON:0003077!1.22e-10!83;UBERON:0003059!1.22e-10!83;UBERON:0007282!1.22e-10!83;UBERON:0009618!1.22e-10!83;UBERON:0007285!1.22e-10!83;UBERON:0004290!1.99e-10!70;UBERON:0001134!3.70e-10!61;UBERON:0002036!3.70e-10!61;UBERON:0003082!3.70e-10!61;UBERON:0002385!7.43e-10!63;UBERON:0001015!7.43e-10!63;UBERON:0000383!7.43e-10!63;UBERON:0002384!6.00e-09!375;UBERON:0002204!5.04e-08!167;UBERON:0000486!2.26e-07!82;UBERON:0000948!3.48e-07!24;UBERON:0005498!3.48e-07!24;UBERON:0004140!3.48e-07!24;UBERON:0009881!3.48e-07!24;UBERON:0004141!3.48e-07!24;UBERON:0003084!3.48e-07!24;UBERON:0007005!3.48e-07!24;UBERON:0004139!3.48e-07!24;UBERON:0004291!3.48e-07!24;UBERON:0007100!5.67e-07!27 | |ontology_enrichment_uberon=UBERON:0000914!1.22e-10!83;UBERON:0002329!1.22e-10!83;UBERON:0003077!1.22e-10!83;UBERON:0003059!1.22e-10!83;UBERON:0007282!1.22e-10!83;UBERON:0009618!1.22e-10!83;UBERON:0007285!1.22e-10!83;UBERON:0004290!1.99e-10!70;UBERON:0001134!3.70e-10!61;UBERON:0002036!3.70e-10!61;UBERON:0003082!3.70e-10!61;UBERON:0002385!7.43e-10!63;UBERON:0001015!7.43e-10!63;UBERON:0000383!7.43e-10!63;UBERON:0002384!6.00e-09!375;UBERON:0002204!5.04e-08!167;UBERON:0000486!2.26e-07!82;UBERON:0000948!3.48e-07!24;UBERON:0005498!3.48e-07!24;UBERON:0004140!3.48e-07!24;UBERON:0009881!3.48e-07!24;UBERON:0004141!3.48e-07!24;UBERON:0003084!3.48e-07!24;UBERON:0007005!3.48e-07!24;UBERON:0004139!3.48e-07!24;UBERON:0004291!3.48e-07!24;UBERON:0007100!5.67e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;4.49e-07;22!UBERON:0002385;6.59e-07;31!UBERON:0001015;6.59e-07;31!UBERON:0000383;6.59e-07;31!UBERON:0007100;8.42e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.87e-11,73;UBERON:0003077,7.74e-11,72;UBERON:0007285,7.74e-11,72;UBERON:0002329,8.35e-11,71;UBERON:0003059,8.35e-11,71;UBERON:0007282,8.35e-11,71;UBERON:0004290,8.35e-11,71;UBERON:0009618,8.35e-11,71;UBERON:0001134,1.58e-10,62;UBERON:0002036,1.58e-10,62;UBERON:0003082,1.58e-10,62;UBERON:0002385,3.22e-10,64;UBERON:0001015,3.22e-10,64;UBERON:0000383,3.22e-10,64;UBERON:0002384,4.72e-10,371;UBERON:0007503,1.39e-07,78;UBERON:0000486,1.56e-07,83;UBERON:0002204,1.58e-07,167;UBERON:0000948,2.19e-07,24;UBERON:0005498,2.19e-07,24;UBERON:0004140,2.19e-07,24;UBERON:0009881,2.19e-07,24;UBERON:0004141,2.19e-07,24;UBERON:0003084,2.19e-07,24;UBERON:0007005,2.19e-07,24;UBERON:0004139,2.19e-07,24;UBERON:0004291,2.19e-07,24;UBERON:0000926,3.20e-07,315;UBERON:0004120,3.20e-07,315;UBERON:0006603,3.20e-07,315;UBERON:0007100,3.65e-07,27 | |||
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| ||
|short_description=p1@LOC100132891 | |short_description=p1@LOC100132891 | ||
}} | }} |
Latest revision as of 01:08, 19 September 2015
Short description: | p1@LOC100132891 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100132891_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000457356, ENST00000518916, ENST00000519751, NR_033651_5end |
EntrezGene: | LOC100132891 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.28e-17 | 76 |
multi fate stem cell | 1.14e-15 | 427 |
somatic stem cell | 4.42e-15 | 433 |
stem cell | 3.34e-13 | 441 |
motile cell | 2.71e-10 | 386 |
muscle precursor cell | 5.39e-10 | 58 |
myoblast | 5.39e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.39e-10 | 58 |
mesenchymal cell | 9.34e-10 | 354 |
muscle cell | 1.78e-09 | 55 |
connective tissue cell | 6.51e-09 | 361 |
fat cell | 3.85e-07 | 15 |
electrically responsive cell | 7.59e-07 | 61 |
electrically active cell | 7.59e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 4.87e-11 | 73 |
paraxial mesoderm | 7.74e-11 | 72 |
presumptive paraxial mesoderm | 7.74e-11 | 72 |
somite | 8.35e-11 | 71 |
presomitic mesoderm | 8.35e-11 | 71 |
presumptive segmental plate | 8.35e-11 | 71 |
dermomyotome | 8.35e-11 | 71 |
trunk paraxial mesoderm | 8.35e-11 | 71 |
skeletal muscle tissue | 1.58e-10 | 62 |
striated muscle tissue | 1.58e-10 | 62 |
myotome | 1.58e-10 | 62 |
muscle tissue | 3.22e-10 | 64 |
musculature | 3.22e-10 | 64 |
musculature of body | 3.22e-10 | 64 |
connective tissue | 4.72e-10 | 371 |
epithelial vesicle | 1.39e-07 | 78 |
multilaminar epithelium | 1.56e-07 | 83 |
musculoskeletal system | 1.58e-07 | 167 |
heart | 2.19e-07 | 24 |
primitive heart tube | 2.19e-07 | 24 |
primary heart field | 2.19e-07 | 24 |
anterior lateral plate mesoderm | 2.19e-07 | 24 |
heart tube | 2.19e-07 | 24 |
heart primordium | 2.19e-07 | 24 |
cardiac mesoderm | 2.19e-07 | 24 |
cardiogenic plate | 2.19e-07 | 24 |
heart rudiment | 2.19e-07 | 24 |
mesoderm | 3.20e-07 | 315 |
mesoderm-derived structure | 3.20e-07 | 315 |
presumptive mesoderm | 3.20e-07 | 315 |
primary circulatory organ | 3.65e-07 | 27 |