FFCP PHASE1:Hg19::chr16:85832738..85832753,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:85832738..85832753,-
|short_description=p5@COX4NB
|description=CAGE_peak_5_at_COX4NB_5end
|association_with_transcript=147bp_to_BT007132_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10328 | |EntrezGene=10328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7864 | |HGNC=7864 | ||
|TSSclassifier=strong | |||
|UniProt=Q53Y03 | |UniProt=Q53Y03 | ||
|association_with_transcript=147bp_to_BT007132_5end | |||
|cluster_id=chr16:85832738..85832753,- | |||
|description=CAGE_peak_5_at_COX4NB_5end | |||
|id=chr16:85832738..85832753,- | |||
|ontology_enrichment_celltype=CL:0000012!2.14e-20!682;CL:0000548!9.71e-20!679;CL:0000004!9.71e-20!679;CL:0000255!9.71e-20!679;CL:0000222!2.38e-19!119;CL:0000144!4.31e-19!625;CL:0002371!3.47e-17!591;CL:0002321!1.58e-16!248;CL:0000220!1.78e-16!246;CL:0000003!2.13e-13!722;CL:0000680!1.44e-12!57;CL:0000056!1.44e-12!57;CL:0000355!1.44e-12!57;CL:0000183!2.34e-12!59;CL:0000187!7.73e-12!54;CL:0000192!9.90e-12!42;CL:0000514!9.90e-12!42;CL:0000055!6.16e-11!180;CL:0000213!5.98e-10!57;CL:0000215!5.98e-10!57;CL:0000393!1.49e-09!60;CL:0000211!1.49e-09!60;CL:0000115!2.50e-09!35;CL:0000359!2.68e-09!32;CL:0002139!4.65e-09!24;CL:0000066!1.43e-07!254;CL:0002078!1.81e-07!44;CL:0000071!4.48e-07!18;CL:0002546!4.48e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.56e-12;32!CL:0000192;1.48e-10;43!CL:0002539;4.71e-10;10!CL:0002139;1.93e-08;24!CL:0002144;4.11e-08;3!CL:0000187;9.85e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.91e-14,121;CL:0000192,4.97e-14,43;CL:0000514,4.97e-14,43;CL:0000359,4.21e-13,32;CL:0000680,1.43e-12,58;CL:0000056,1.43e-12,58;CL:0000355,1.43e-12,58;CL:0000187,2.33e-12,55;CL:0000393,1.43e-10,61;CL:0000211,1.43e-10,61;CL:0002539,2.04e-10,10;CL:0002139,1.52e-08,24;CL:0000115,1.91e-08,36;CL:0002144,4.53e-08,3;CL:0002321,5.35e-07,250;CL:0002570,9.23e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000514;1.48e-10;43!CL:0000355;4.31e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.15e-07;3!DOID:127;6.15e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,5.92e-07,3;DOID:127,5.92e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.91e-16!79;UBERON:0007798!1.91e-16!79;UBERON:0000055!1.25e-14!69;UBERON:0000490!2.83e-14!138;UBERON:0000486!2.33e-13!82;UBERON:0001981!1.43e-12!60;UBERON:0007500!1.43e-12!60;UBERON:0004537!1.43e-12!60;UBERON:0006965!1.43e-12!60;UBERON:0004535!1.13e-11!110;UBERON:0004872!3.08e-11!84;UBERON:0003914!3.29e-11!118;UBERON:0004290!4.04e-11!70;UBERON:0001134!6.86e-11!61;UBERON:0002036!6.86e-11!61;UBERON:0003082!6.86e-11!61;UBERON:0001009!1.34e-10!113;UBERON:0000914!2.41e-10!83;UBERON:0002329!2.41e-10!83;UBERON:0003077!2.41e-10!83;UBERON:0003059!2.41e-10!83;UBERON:0007282!2.41e-10!83;UBERON:0009618!2.41e-10!83;UBERON:0007285!2.41e-10!83;UBERON:0002385!6.45e-10!63;UBERON:0001015!6.45e-10!63;UBERON:0000383!6.45e-10!63;UBERON:0001637!4.81e-09!42;UBERON:0003509!4.81e-09!42;UBERON:0004572!4.81e-09!42;UBERON:0005256!1.94e-08!143;UBERON:0000119!3.68e-08!312;UBERON:0000483!7.14e-08!309;UBERON:0006914!1.31e-07!25;UBERON:0004573!3.98e-07!33;UBERON:0004571!3.98e-07!33;UBERON:0001986!4.48e-07!18;UBERON:0004638!4.48e-07!18;UBERON:0004852!4.48e-07!18;UBERON:0000487!7.32e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;4.71e-10;10!UBERON:0004695;4.71e-10;10!UBERON:0002111;4.71e-10;10!UBERON:0004178;4.71e-10;10!UBERON:0004573;1.03e-09;33!UBERON:0004571;1.03e-09;33!UBERON:0007500;1.44e-09;56!UBERON:0001981;1.44e-09;56!UBERON:0004537;1.44e-09;56!UBERON:0001637;2.52e-09;42!UBERON:0003509;2.52e-09;42!UBERON:0004572;2.52e-09;42!UBERON:0001013;1.89e-08;14!UBERON:0000947;2.01e-08;21!UBERON:0010191;2.01e-08;21!UBERON:0010523;4.11e-08;3!UBERON:0001915;4.11e-08;3!UBERON:0001982;4.11e-08;3!UBERON:0001135;4.67e-08;15!UBERON:0000055;2.74e-07;65!UBERON:0002049;3.93e-07;75!UBERON:0007798;3.93e-07;75 | |||
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| ||
|short_description=p5@COX4NB | |||
}} | }} |
Latest revision as of 05:57, 18 September 2015
Short description: | p5@COX4NB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_COX4NB_5end |
Coexpression cluster: | NA |
Association with transcript: | 147bp_to_BT007132_5end |
EntrezGene: | COX4NB |
HGNC: | 7864 |
UniProt: | Q53Y03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.91e-14 | 121 |
smooth muscle cell | 4.97e-14 | 43 |
smooth muscle myoblast | 4.97e-14 | 43 |
vascular associated smooth muscle cell | 4.21e-13 | 32 |
muscle precursor cell | 1.43e-12 | 58 |
myoblast | 1.43e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.43e-12 | 58 |
muscle cell | 2.33e-12 | 55 |
electrically responsive cell | 1.43e-10 | 61 |
electrically active cell | 1.43e-10 | 61 |
aortic smooth muscle cell | 2.04e-10 | 10 |
endothelial cell of vascular tree | 1.52e-08 | 24 |
endothelial cell | 1.91e-08 | 36 |
capillary endothelial cell | 4.53e-08 | 3 |
embryonic cell | 5.35e-07 | 250 |
mesenchymal stem cell of adipose | 9.23e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 5.92e-07 | 3 |
leiomyoma | 5.92e-07 | 3 |