FFCP PHASE1:Hg19::chr8:87756039..87756052,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54714 | |EntrezGene=54714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2153 | |HGNC=2153 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQW8 | |UniProt=Q9NQW8 | ||
|association_with_transcript=-136bp_to_ENST00000320005,NM_019098_5end | |association_with_transcript=-136bp_to_ENST00000320005,NM_019098_5end | ||
|cluster_id=chr8:87756039..87756052,- | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_8_at_CNGB3_5end | |description=CAGE_peak_8_at_CNGB3_5end | ||
|id=chr8:87756039..87756052,- | |id=chr8:87756039..87756052,- | ||
|ontology_enrichment_celltype=CL:0000810!9.36e-15!1;CL:0000895!9.36e-15!1;CL:0002436!9.36e-15!1;CL:0002427!9.36e-15!1;CL:0002428!9.36e-15!1;CL:0002429!9.36e-15!1;CL:0002433!9.36e-15!1;CL:0002431!9.36e-15!1;CL:0002432!9.36e-15!1;CL:0000893!5.02e-08!2;CL:0002489!5.02e-08!2;CL:0000809!5.02e-08!2;CL:0000808!5.02e-08!2;CL:0000894!5.02e-08!2;CL:0000806!5.02e-08!2;CL:0000807!5.02e-08!2;CL:0000805!5.02e-08!2;CL:0002425!5.02e-08!2;CL:0002195!6.58e-08!2;CL:0002571!6.58e-08!2 | |ontology_enrichment_celltype=CL:0000810!9.36e-15!1;CL:0000895!9.36e-15!1;CL:0002436!9.36e-15!1;CL:0002427!9.36e-15!1;CL:0002428!9.36e-15!1;CL:0002429!9.36e-15!1;CL:0002433!9.36e-15!1;CL:0002431!9.36e-15!1;CL:0002432!9.36e-15!1;CL:0000893!5.02e-08!2;CL:0002489!5.02e-08!2;CL:0000809!5.02e-08!2;CL:0000808!5.02e-08!2;CL:0000894!5.02e-08!2;CL:0000806!5.02e-08!2;CL:0000807!5.02e-08!2;CL:0000805!5.02e-08!2;CL:0002425!5.02e-08!2;CL:0002195!6.58e-08!2;CL:0002571!6.58e-08!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.09e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!3.14e-28!2;UBERON:0002757!3.14e-28!2;UBERON:0010134!3.14e-28!2;UBERON:0002784!3.14e-28!2;UBERON:0005408!3.14e-28!2;UBERON:0001899!3.14e-28!2;UBERON:0001896!1.24e-18!3;UBERON:0005290!1.24e-18!3;UBERON:0010096!1.24e-18!3;UBERON:0003296!1.23e-14!4;UBERON:0010133!1.23e-14!4;UBERON:0000966!8.32e-12!5;UBERON:0005388!8.32e-12!5;UBERON:0001802!8.32e-12!5;UBERON:0002368!1.64e-09!35;UBERON:0001894!9.33e-09!7;UBERON:0006222!9.33e-09!7;UBERON:0003076!1.52e-08!15;UBERON:0003057!1.52e-08!15;UBERON:0007023!2.25e-08!115;UBERON:0002298!1.45e-07!8;UBERON:0000949!2.22e-07!45;UBERON:0003075!5.20e-07!86;UBERON:0007284!5.20e-07!86;UBERON:0005743!6.35e-07!86 | |ontology_enrichment_uberon=UBERON:0001905!3.14e-28!2;UBERON:0002757!3.14e-28!2;UBERON:0010134!3.14e-28!2;UBERON:0002784!3.14e-28!2;UBERON:0005408!3.14e-28!2;UBERON:0001899!3.14e-28!2;UBERON:0001896!1.24e-18!3;UBERON:0005290!1.24e-18!3;UBERON:0010096!1.24e-18!3;UBERON:0003296!1.23e-14!4;UBERON:0010133!1.23e-14!4;UBERON:0000966!8.32e-12!5;UBERON:0005388!8.32e-12!5;UBERON:0001802!8.32e-12!5;UBERON:0002368!1.64e-09!35;UBERON:0001894!9.33e-09!7;UBERON:0006222!9.33e-09!7;UBERON:0003076!1.52e-08!15;UBERON:0003057!1.52e-08!15;UBERON:0007023!2.25e-08!115;UBERON:0002298!1.45e-07!8;UBERON:0000949!2.22e-07!45;UBERON:0003075!5.20e-07!86;UBERON:0007284!5.20e-07!86;UBERON:0005743!6.35e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.61e-131;2!UBERON:0002757;4.61e-131;2!UBERON:0010134;4.61e-131;2!UBERON:0005408;4.61e-131;2!UBERON:0001899;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0002784;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0000966;1.83e-14;5!UBERON:0005388;1.83e-14;5!UBERON:0001802;1.83e-14;5!UBERON:0002368;5.41e-08;33!UBERON:0000949;5.43e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.61e-131,2;UBERON:0002757,4.61e-131,2;UBERON:0010134,4.61e-131,2;UBERON:0005408,4.61e-131,2;UBERON:0001899,4.61e-131,2;UBERON:0003296,2.40e-66,4;UBERON:0010133,2.40e-66,4;UBERON:0002784,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0000966,2.74e-12,6;UBERON:0005388,2.74e-12,6;UBERON:0001802,2.74e-12,6;UBERON:0003056,1.22e-10,61;UBERON:0002368,1.09e-08,35;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41;UBERON:0000949,5.42e-07,45 | |||
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|short_description=p8@CNGB3 | |short_description=p8@CNGB3 | ||
}} | }} |
Latest revision as of 08:47, 19 September 2015
Short description: | p8@CNGB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CNGB3_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -136bp_to_ENST00000320005, NM_019098_5end |
EntrezGene: | CNGB3 |
HGNC: | 2153 |
UniProt: | Q9NQW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.61e-131 | 2 |
regional part of epithalamus | 4.61e-131 | 2 |
secretory circumventricular organ | 4.61e-131 | 2 |
circumventricular organ | 4.61e-131 | 2 |
epithalamus | 4.61e-131 | 2 |
gland of diencephalon | 2.40e-66 | 4 |
neuroendocrine gland | 2.40e-66 | 4 |
regional part of diencephalon | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
retina | 2.74e-12 | 6 |
photoreceptor array | 2.74e-12 | 6 |
posterior segment of eyeball | 2.74e-12 | 6 |
pre-chordal neural plate | 1.22e-10 | 61 |
endocrine gland | 1.09e-08 | 35 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |
endocrine system | 5.42e-07 | 45 |