FFCP PHASE1:Hg19::chr16:88837271..88837291,-: Difference between revisions
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|id=chr16:88837271..88837291,-
|short_description=p@chr16:88837271..88837291,-
|description=CAGE_peak_at_chr16:88837271..88837291,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:88837271..88837291,- | |||
|description=CAGE_peak_at_chr16:88837271..88837291,- | |||
|id=chr16:88837271..88837291,- | |||
|ontology_enrichment_celltype=CL:0000064!7.00e-07!3;CL:0005012!7.00e-07!3;CL:0000067!7.00e-07!3;CL:0002304!7.00e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002586;3.27e-21;3!CL:0000039;2.31e-20;7!CL:0000586;2.31e-20;7!CL:0000149;3.58e-16;4!CL:1000415;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.59e-21,3;CL:0000039,3.02e-20,7;CL:0000586,3.02e-20,7;CL:0000149,2.09e-16,4;CL:1000415,5.49e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.42e-16;4!DOID:1612;1.42e-16;4!DOID:3095;1.85e-11;22!DOID:2994;1.85e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.42e-16,4;DOID:1612,1.42e-16,4;DOID:3095,1.88e-11,22;DOID:2994,1.88e-11,22 | |||
|ontology_enrichment_uberon=UBERON:0000020!7.93e-11!23;UBERON:0000970!9.32e-11!20;UBERON:0001032!2.98e-10!24;UBERON:0004456!2.98e-10!24;UBERON:0002104!4.05e-10!21;UBERON:0000019!2.53e-09!19;UBERON:0000047!2.53e-09!19;UBERON:0004088!2.53e-09!19;UBERON:0003072!2.53e-09!19;UBERON:0003071!2.53e-09!19;UBERON:0004128!2.53e-09!19;UBERON:0007625!1.39e-08!11;UBERON:0000488!2.41e-08!4;UBERON:0001456!3.19e-08!21;UBERON:0000966!8.27e-08!5;UBERON:0005388!8.27e-08!5;UBERON:0001802!8.27e-08!5;UBERON:0002113!5.55e-07!27;UBERON:0003918!5.55e-07!27;UBERON:0005095!5.55e-07!27;UBERON:0007687!5.55e-07!27;UBERON:0001778!7.00e-07!3;UBERON:0001775!7.00e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.96e-31;2!UBERON:0002757;2.96e-31;2!UBERON:0010134;2.96e-31;2!UBERON:0005408;2.96e-31;2!UBERON:0001899;2.96e-31;2!UBERON:0000966;6.67e-28;5!UBERON:0005388;6.67e-28;5!UBERON:0001802;6.67e-28;5!UBERON:0001781;3.27e-21;3!UBERON:0001782;3.27e-21;3!UBERON:0003296;3.58e-16;4!UBERON:0010133;3.58e-16;4!UBERON:0002784;3.58e-16;4!UBERON:0001894;1.18e-09;7!UBERON:0000019;8.28e-08;19!UBERON:0000047;8.28e-08;19!UBERON:0004088;8.28e-08;19!UBERON:0010230;8.28e-08;19!UBERON:0000970;1.92e-07;20!UBERON:0000310;3.54e-07;10!UBERON:0002104;4.10e-07;21!UBERON:0001456;4.10e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.02e-30,2;UBERON:0002757,1.02e-30,2;UBERON:0010134,1.02e-30,2;UBERON:0005408,1.02e-30,2;UBERON:0001899,1.02e-30,2;UBERON:0000966,1.24e-23,6;UBERON:0005388,1.24e-23,6;UBERON:0001802,1.24e-23,6;UBERON:0001782,1.59e-21,3;UBERON:0005424,1.59e-21,3;UBERON:0001781,2.09e-16,4;UBERON:0003296,6.61e-16,4;UBERON:0010133,6.61e-16,4;UBERON:0002784,6.61e-16,4;UBERON:0001894,1.68e-09,7;UBERON:0006222,1.68e-09,7;UBERON:0000019,1.62e-07,20;UBERON:0000047,1.62e-07,20;UBERON:0010312,1.62e-07,20;UBERON:0004088,1.62e-07,20;UBERON:0010230,1.62e-07,20;UBERON:0003072,1.62e-07,20;UBERON:0004128,1.62e-07,20;UBERON:0003071,1.62e-07,20;UBERON:0000970,3.49e-07,21;UBERON:0002104,3.49e-07,21;UBERON:0000310,3.54e-07,10;UBERON:0001456,7.03e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.263504357079378,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,2.57545848628462,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.231046011313244,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,1.96808787419823,1.62689197332152,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0.295930216910801,0,0,0,0,0,2.08342208868187,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0.653630781113941,0,0.230850775511391,0.113942055847001,1.1528195219403,1.16684937732704,3.80265801727028,0,0.274792780205587,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0,1.56441106187842,0.0801588202515337,0,0.19980960958213,0,0,0,0.14405479798815,0.248505071130865,0,0.135904206073614,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0,0,0.110929051536852,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17777262201231,0.471878893390961,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0.255524855279191,1.07140367175657,1.00885116665647,0,0,0.266107110487916,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0.560544326627578,0,0,0,0.285906176706625,1.42212250559454,0.348724276104376,0,0,0.207216164163037,0,0.691259661814092,0,0,0,0.846774100381858,0,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64708051314868,0,0,0.18378979906969,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0.179650404213174,0,0.366724332548599,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.263504357079378,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,2.57545848628462,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783204629850962,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.231046011313244,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,1.96808787419823,1.62689197332152,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.593929361665277,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0.295930216910801,0,0,0,0,0,2.08342208868187,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0.653630781113941,0,0.230850775511391,0.113942055847001,1.1528195219403,1.16684937732704,3.80265801727028,0,0.274792780205587,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0,1.56441106187842,0.0801588202515337,0,0.19980960958213,0,0,0,0.14405479798815,0.248505071130865,0,0.135904206073614,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0,0,0.110929051536852,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17777262201231,0.471878893390961,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0.255524855279191,1.07140367175657,1.00885116665647,0,0,0.266107110487916,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0.560544326627578,0,0,0,0.285906176706625,1.42212250559454,0.348724276104376,0,0,0.207216164163037,0,0.691259661814092,0,0,0,0.846774100381858,0,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64708051314868,0,0,0.18378979906969,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0.179650404213174,0,0.366724332548599,0,0,0.201273793591026,0 | ||
|short_description=p@chr16:88837271..88837291,- | |||
}} | }} |
Latest revision as of 13:22, 25 July 2015
Short description: | p@chr16:88837271..88837291, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:88837271..88837291, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.59e-21 | 3 |
germ line cell | 3.02e-20 | 7 |
germ cell | 3.02e-20 | 7 |
visual pigment cell | 2.09e-16 | 4 |
epithelial cell of gall bladder | 5.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.02e-30 | 2 |
regional part of epithalamus | 1.02e-30 | 2 |
secretory circumventricular organ | 1.02e-30 | 2 |
circumventricular organ | 1.02e-30 | 2 |
epithalamus | 1.02e-30 | 2 |
retina | 1.24e-23 | 6 |
photoreceptor array | 1.24e-23 | 6 |
posterior segment of eyeball | 1.24e-23 | 6 |
pigmented layer of retina | 1.59e-21 | 3 |
presumptive retinal pigmented epithelium | 1.59e-21 | 3 |
layer of retina | 2.09e-16 | 4 |
gland of diencephalon | 6.61e-16 | 4 |
neuroendocrine gland | 6.61e-16 | 4 |
regional part of diencephalon | 6.61e-16 | 4 |
diencephalon | 1.68e-09 | 7 |
future diencephalon | 1.68e-09 | 7 |
camera-type eye | 1.62e-07 | 20 |
simple eye | 1.62e-07 | 20 |
immature eye | 1.62e-07 | 20 |
ocular region | 1.62e-07 | 20 |
eyeball of camera-type eye | 1.62e-07 | 20 |
optic cup | 1.62e-07 | 20 |
optic vesicle | 1.62e-07 | 20 |
eye primordium | 1.62e-07 | 20 |
eye | 3.49e-07 | 21 |
visual system | 3.49e-07 | 21 |
breast | 3.54e-07 | 10 |
face | 7.03e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.42e-16 | 4 |
breast cancer | 1.42e-16 | 4 |
germ cell and embryonal cancer | 1.88e-11 | 22 |
germ cell cancer | 1.88e-11 | 22 |