FFCP PHASE1:Hg19::chr14:36988564..36988601,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7080 | |EntrezGene=7080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |HGNC=11825 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=296bp_to_ENST00000498187_5end | |association_with_transcript=296bp_to_ENST00000498187_5end | ||
|cluster_id=chr14:36988564..36988601,- | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_7_at_NKX2-1_5end | |description=CAGE_peak_7_at_NKX2-1_5end | ||
|id=chr14:36988564..36988601,- | |id=chr14:36988564..36988601,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.37e-10;1!CL:0000082;6.79e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.57e-10,1;CL:0000082,7.31e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.23e-29;5!UBERON:0008947;2.51e-24;29!UBERON:0001041;1.22e-18;30!UBERON:0006595;1.31e-07;86 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;2.87e-10;1!DOID:1324;5.85e-10;15!DOID:3905;1.13e-09;9!DOID:0050615;2.39e-09;16!DOID:3908;2.73e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.89e-10,1;DOID:1324,6.43e-10,15;DOID:3905,1.22e-09,9;DOID:0050615,2.62e-09,16;DOID:3908,3.16e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002046!4.80e-13!5;UBERON:0004117!4.80e-13!5;UBERON:0007689!4.80e-13!5;UBERON:0007123!4.80e-13!5;UBERON:0003091!4.80e-13!5;UBERON:0005383!9.75e-12!3;UBERON:0005382!9.75e-12!3;UBERON:0000369!6.57e-09!4;UBERON:0002435!6.57e-09!4;UBERON:0000204!6.57e-09!4;UBERON:0010082!6.57e-09!4;UBERON:0003127!9.52e-09!2;UBERON:0000341!1.74e-08!2;UBERON:0001873!2.09e-08!2;UBERON:0010122!2.09e-08!2;UBERON:0008947!3.14e-08!38;UBERON:0003258!3.14e-08!38;UBERON:0002048!6.82e-08!22;UBERON:0000117!6.82e-08!22;UBERON:0000171!6.82e-08!22;UBERON:0000170!6.82e-08!22;UBERON:0005597!6.82e-08!22;UBERON:0000118!6.82e-08!22;UBERON:0000065!8.23e-08!53;UBERON:0005178!9.68e-08!34;UBERON:0002224!9.68e-08!34;UBERON:0005181!1.80e-07!35;UBERON:0001004!4.20e-07!72 | |ontology_enrichment_uberon=UBERON:0002046!4.80e-13!5;UBERON:0004117!4.80e-13!5;UBERON:0007689!4.80e-13!5;UBERON:0007123!4.80e-13!5;UBERON:0003091!4.80e-13!5;UBERON:0005383!9.75e-12!3;UBERON:0005382!9.75e-12!3;UBERON:0000369!6.57e-09!4;UBERON:0002435!6.57e-09!4;UBERON:0000204!6.57e-09!4;UBERON:0010082!6.57e-09!4;UBERON:0003127!9.52e-09!2;UBERON:0000341!1.74e-08!2;UBERON:0001873!2.09e-08!2;UBERON:0010122!2.09e-08!2;UBERON:0008947!3.14e-08!38;UBERON:0003258!3.14e-08!38;UBERON:0002048!6.82e-08!22;UBERON:0000117!6.82e-08!22;UBERON:0000171!6.82e-08!22;UBERON:0000170!6.82e-08!22;UBERON:0005597!6.82e-08!22;UBERON:0000118!6.82e-08!22;UBERON:0000065!8.23e-08!53;UBERON:0005178!9.68e-08!34;UBERON:0002224!9.68e-08!34;UBERON:0005181!1.80e-07!35;UBERON:0001004!4.20e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.23e-29;5!UBERON:0002048;6.87e-20;22!UBERON:0000117;6.87e-20;22!UBERON:0000171;6.87e-20;22!UBERON:0000170;6.87e-20;22!UBERON:0003127;8.57e-19;2!UBERON:0005178;1.40e-16;34!UBERON:0002224;1.40e-16;34!UBERON:0005181;1.10e-15;35!UBERON:0000065;4.11e-11;44!UBERON:0002171;6.73e-11;1!UBERON:0006518;6.73e-11;1!UBERON:0008949;6.73e-11;1!UBERON:0000101;6.73e-11;1!UBERON:0002167;6.73e-11;1!UBERON:0000915;3.36e-08;52!UBERON:0004802;6.79e-08;19!UBERON:0000115;6.79e-08;19!UBERON:0004807;7.79e-07;22!UBERON:0002368;9.39e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,8.55e-30,5;UBERON:0004117,8.55e-30,5;UBERON:0007689,8.55e-30,5;UBERON:0007123,8.55e-30,5;UBERON:0003091,8.55e-30,5;UBERON:0005178,1.48e-20,34;UBERON:0002224,1.48e-20,34;UBERON:0005181,6.18e-20,35;UBERON:0002048,7.61e-20,22;UBERON:0000117,7.61e-20,22;UBERON:0000171,7.61e-20,22;UBERON:0000170,7.61e-20,22;UBERON:0005597,7.61e-20,22;UBERON:0000118,7.61e-20,22;UBERON:0003127,7.16e-19,2;UBERON:0008947,2.89e-18,38;UBERON:0003258,2.89e-18,38;UBERON:0005911,9.76e-17,82;UBERON:0005153,6.79e-15,37;UBERON:0009722,1.08e-13,11;UBERON:0007690,1.08e-13,11;UBERON:0000915,5.16e-13,52;UBERON:0000065,1.74e-12,54;UBERON:0001007,1.41e-11,145;UBERON:0001555,1.41e-11,145;UBERON:0007026,1.41e-11,145;UBERON:0005157,1.63e-11,47;UBERON:0002171,6.73e-11,1;UBERON:0006518,6.73e-11,1;UBERON:0008949,6.73e-11,1;UBERON:0000101,6.73e-11,1;UBERON:0002167,6.73e-11,1;UBERON:0004119,2.91e-10,160;UBERON:0000925,2.91e-10,160;UBERON:0006595,2.91e-10,160;UBERON:0005177,3.30e-09,101;UBERON:0001041,5.54e-09,87;UBERON:0001048,7.16e-09,160;UBERON:0001004,9.08e-09,74;UBERON:0008814,1.96e-08,18;UBERON:0009569,3.93e-08,112;UBERON:0004802,7.31e-08,19;UBERON:0000115,7.31e-08,19;UBERON:0004921,1.61e-07,118 | |||
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| ||
|short_description=p7@NKX2-1 | |short_description=p7@NKX2-1 | ||
}} | }} |
Latest revision as of 22:24, 19 September 2015
Short description: | p7@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NKX2-1_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 296bp_to_ENST00000498187_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.57e-10 | 1 |
epithelial cell of lung | 7.31e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.89e-10 | 1 |
lung cancer | 6.43e-10 | 15 |
lung carcinoma | 1.22e-09 | 9 |
respiratory system cancer | 2.62e-09 | 16 |
non-small cell lung carcinoma | 3.16e-08 | 5 |