FFCP PHASE1:Hg19::chr17:1389275..1389316,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:1389275..1389316,-
|short_description=p6@MYO1C
|description=CAGE_peak_6_at_MYO1C_5end
|association_with_transcript=-224bp_to_ENST00000438665,NM_001080950,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4641 | |EntrezGene=4641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7597 | |HGNC=7597 | ||
|TSSclassifier=strong | |||
|UniProt=O00159 | |UniProt=O00159 | ||
|association_with_transcript=-224bp_to_ENST00000438665,NM_001080950,uc002fsn.2_5end | |||
|cluster_id=chr17:1389275..1389316,- | |||
|description=CAGE_peak_6_at_MYO1C_5end | |||
|id=chr17:1389275..1389316,- | |||
|ontology_enrichment_celltype=CL:0000055!1.77e-22!180;CL:0000220!1.86e-16!246;CL:0000222!3.65e-16!119;CL:0002321!5.14e-16!248;CL:0000066!1.86e-14!254;CL:0000057!2.57e-13!75;CL:0000548!2.47e-11!679;CL:0000004!2.47e-11!679;CL:0000255!2.47e-11!679;CL:0000012!1.74e-10!682;CL:0000192!6.43e-10!42;CL:0000514!6.43e-10!42;CL:0000183!7.73e-10!59;CL:0000680!2.57e-09!57;CL:0000056!2.57e-09!57;CL:0000355!2.57e-09!57;CL:0000187!6.93e-09!54;CL:0000144!8.14e-08!625;CL:0000359!9.56e-08!32;CL:1000449!1.35e-07!16;CL:0002371!1.47e-07!591;CL:1000497!4.05e-07!18;CL:0002518!4.05e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.94e-08;15!CL:0000192;6.49e-08;43!CL:0000359;1.31e-07;32!CL:0002681;2.44e-07;12!CL:0002584;2.44e-07;12!CL:1000497;2.48e-07;17!CL:0002518;2.48e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.41e-17,121;CL:0002321,1.40e-14,250;CL:0000057,3.22e-13,76;CL:0000192,1.32e-10,43;CL:0000514,1.32e-10,43;CL:0000066,2.06e-10,253;CL:0000680,5.87e-10,58;CL:0000056,5.87e-10,58;CL:0000355,5.87e-10,58;CL:0000187,1.79e-09,55;CL:1000449,1.99e-08,15;CL:0000359,2.27e-08,32;CL:1000497,2.31e-07,17;CL:0002518,2.31e-07,17;CL:0002681,2.55e-07,12;CL:0002584,2.55e-07,12;CL:0000393,5.27e-07,61;CL:0000211,5.27e-07,61;CL:0000213,5.82e-07,58;CL:0000215,5.82e-07,58;CL:0002620,9.65e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;6.49e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!9.78e-17!216;UBERON:0003104!1.69e-15!238;UBERON:0009142!1.69e-15!238;UBERON:0003914!3.49e-14!118;UBERON:0005256!5.40e-14!143;UBERON:0001637!3.17e-11!42;UBERON:0003509!3.17e-11!42;UBERON:0004572!3.17e-11!42;UBERON:0000490!3.20e-11!138;UBERON:0004872!6.45e-11!84;UBERON:0000055!1.08e-10!69;UBERON:0001981!1.95e-10!60;UBERON:0007500!1.95e-10!60;UBERON:0004537!1.95e-10!60;UBERON:0006965!1.95e-10!60;UBERON:0002049!2.53e-10!79;UBERON:0007798!2.53e-10!79;UBERON:0004573!4.89e-10!33;UBERON:0004571!4.89e-10!33;UBERON:0000475!6.72e-10!365;UBERON:0000486!9.11e-10!82;UBERON:0000468!2.06e-09!659;UBERON:0000926!8.64e-09!448;UBERON:0004120!8.64e-09!448;UBERON:0006603!8.64e-09!448;UBERON:0000481!1.08e-08!347;UBERON:0003102!1.13e-08!95;UBERON:0000467!1.15e-08!625;UBERON:0001008!1.16e-08!45;UBERON:0009569!1.37e-08!113;UBERON:0000914!1.49e-08!83;UBERON:0002329!1.49e-08!83;UBERON:0003077!1.49e-08!83;UBERON:0003059!1.49e-08!83;UBERON:0007282!1.49e-08!83;UBERON:0009618!1.49e-08!83;UBERON:0007285!1.49e-08!83;UBERON:0000480!1.63e-08!626;UBERON:0002385!1.64e-08!63;UBERON:0001015!1.64e-08!63;UBERON:0000383!1.64e-08!63;UBERON:0000464!1.85e-08!104;UBERON:0004119!2.00e-08!169;UBERON:0000925!2.00e-08!169;UBERON:0006595!2.00e-08!169;UBERON:0004290!2.67e-08!70;UBERON:0006554!3.17e-08!44;UBERON:0001134!3.20e-08!61;UBERON:0002036!3.20e-08!61;UBERON:0003082!3.20e-08!61;UBERON:0003064!3.79e-08!37;UBERON:0000466!5.35e-08!126;UBERON:0002553!9.95e-08!70;UBERON:0004211!1.35e-07!16;UBERON:0001285!1.35e-07!16;UBERON:0007684!1.35e-07!16;UBERON:0003220!1.35e-07!16;UBERON:0004208!1.35e-07!16;UBERON:0004876!1.75e-07!20;UBERON:0006555!2.32e-07!17;UBERON:0005103!2.32e-07!17;UBERON:0000083!2.32e-07!17;UBERON:0009201!2.32e-07!17;UBERON:0004819!2.32e-07!17;UBERON:0006553!2.32e-07!17;UBERON:0003074!2.32e-07!17;UBERON:0003060!2.32e-07!17;UBERON:0000483!7.08e-07!309;UBERON:0000477!9.09e-07!286;UBERON:0000080!9.96e-07!18;UBERON:0002120!9.96e-07!18;UBERON:0004875!9.96e-07!18;UBERON:0005721!9.96e-07!18;UBERON:0005754!9.96e-07!18;UBERON:0007297!9.96e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.54e-10;33!UBERON:0004571;3.54e-10;33!UBERON:0001637;1.13e-08;42!UBERON:0003509;1.13e-08;42!UBERON:0004572;1.13e-08;42!UBERON:0006555;1.94e-08;15!UBERON:0004819;1.94e-08;15!UBERON:0001285;1.94e-08;15!UBERON:0007684;1.94e-08;15!UBERON:0003914;8.68e-08;74!UBERON:0001225;2.44e-07;12!UBERON:0008987;2.44e-07;12!UBERON:0007500;4.48e-07;56!UBERON:0001981;4.48e-07;56!UBERON:0004537;4.48e-07;56 | |||
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|short_description=p6@MYO1C | |||
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Latest revision as of 16:59, 18 September 2015
Short description: | p6@MYO1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MYO1C_5end |
Coexpression cluster: | NA |
Association with transcript: | -224bp_to_ENST00000438665, NM_001080950, uc002fsn.2_5end |
EntrezGene: | MYO1C |
HGNC: | 7597 |
UniProt: | O00159 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.41e-17 | 121 |
embryonic cell | 1.40e-14 | 250 |
fibroblast | 3.22e-13 | 76 |
smooth muscle cell | 1.32e-10 | 43 |
smooth muscle myoblast | 1.32e-10 | 43 |
epithelial cell | 2.06e-10 | 253 |
muscle precursor cell | 5.87e-10 | 58 |
myoblast | 5.87e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.87e-10 | 58 |
muscle cell | 1.79e-09 | 55 |
epithelial cell of nephron | 1.99e-08 | 15 |
vascular associated smooth muscle cell | 2.27e-08 | 32 |
kidney cell | 2.31e-07 | 17 |
kidney epithelial cell | 2.31e-07 | 17 |
kidney cortical cell | 2.55e-07 | 12 |
renal cortical epithelial cell | 2.55e-07 | 12 |
electrically responsive cell | 5.27e-07 | 61 |
electrically active cell | 5.27e-07 | 61 |
lining cell | 5.82e-07 | 58 |
barrier cell | 5.82e-07 | 58 |
skin fibroblast | 9.65e-07 | 23 |