FFCP PHASE1:Hg19::chr17:26369687..26369715,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:26369687..26369715,+
|short_description=p2@NLK
|description=CAGE_peak_2_at_NLK_5end
|association_with_transcript=0bp_to_NM_016231,uc010cri.1,uc010crj.2_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51701 | |EntrezGene=51701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29858 | |HGNC=29858 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBE8 | |UniProt=Q9UBE8 | ||
|association_with_transcript=0bp_to_NM_016231,uc010cri.1,uc010crj.2_5end | |||
|cluster_id=chr17:26369687..26369715,+ | |||
|description=CAGE_peak_2_at_NLK_5end | |||
|id=chr17:26369687..26369715,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.51e-08!239;DOID:162!4.62e-08!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!4.81e-15!41;UBERON:0001890!4.81e-15!41;UBERON:0006240!4.81e-15!41;UBERON:0002020!5.25e-14!34;UBERON:0003528!5.25e-14!34;UBERON:0003080!6.16e-14!42;UBERON:0001893!1.50e-13!34;UBERON:0001869!2.54e-13!32;UBERON:0002791!4.59e-13!33;UBERON:0000955!4.95e-13!69;UBERON:0006238!4.95e-13!69;UBERON:0001049!8.23e-13!57;UBERON:0005068!8.23e-13!57;UBERON:0006241!8.23e-13!57;UBERON:0007135!8.23e-13!57;UBERON:0001017!4.62e-12!82;UBERON:0002619!6.02e-12!22;UBERON:0005743!1.01e-11!86;UBERON:0002616!1.48e-11!59;UBERON:0000073!4.27e-11!94;UBERON:0001016!4.27e-11!94;UBERON:0001950!5.40e-11!20;UBERON:0000956!1.06e-10!25;UBERON:0000203!1.06e-10!25;UBERON:0003056!2.63e-09!61;UBERON:0007023!4.46e-09!115;UBERON:0003075!2.04e-08!86;UBERON:0007284!2.04e-08!86;UBERON:0002346!3.72e-08!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.00e-12;22!UBERON:0001869;1.61e-12;32!UBERON:0003528;2.59e-12;34!UBERON:0002020;2.59e-12;34!UBERON:0002791;2.84e-12;32!UBERON:0001893;6.21e-12;34!UBERON:0001950;8.92e-12;20!UBERON:0000956;3.23e-11;25!UBERON:0000203;3.23e-11;25!UBERON:0002780;1.34e-10;41!UBERON:0001890;1.34e-10;41!UBERON:0000073;6.53e-08;53!UBERON:0002616;6.53e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.74e-15,41;UBERON:0001890,2.74e-15,41;UBERON:0003080,2.74e-15,41;UBERON:0006240,2.74e-15,41;UBERON:0000073,9.80e-15,53;UBERON:0002616,9.80e-15,53;UBERON:0003528,1.81e-14,34;UBERON:0002020,1.81e-14,34;UBERON:0001893,5.38e-14,34;UBERON:0000955,9.16e-14,68;UBERON:0006238,9.16e-14,68;UBERON:0001869,9.37e-14,32;UBERON:0001049,1.13e-13,56;UBERON:0005068,1.13e-13,56;UBERON:0006241,1.13e-13,56;UBERON:0007135,1.13e-13,56;UBERON:0002791,1.32e-13,32;UBERON:0001017,2.15e-12,81;UBERON:0002619,2.20e-12,22;UBERON:0001016,1.32e-11,89;UBERON:0001950,2.16e-11,20;UBERON:0000956,5.05e-11,25;UBERON:0000203,5.05e-11,25;UBERON:0003056,1.24e-10,61;UBERON:0003075,2.87e-10,82;UBERON:0007284,2.87e-10,82;UBERON:0002346,8.68e-10,86;UBERON:0007023,2.57e-08,114;UBERON:0000025,7.86e-08,192 | |||
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| ||
|short_description=p2@NLK | |||
}} | }} |
Latest revision as of 04:33, 19 September 2015
Short description: | p2@NLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NLK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_016231, uc010cri.1, uc010crj.2_5end |
EntrezGene: | NLK |
HGNC: | 29858 |
UniProt: | Q9UBE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 2.74e-15 | 41 |
forebrain | 2.74e-15 | 41 |
anterior neural tube | 2.74e-15 | 41 |
future forebrain | 2.74e-15 | 41 |
regional part of nervous system | 9.80e-15 | 53 |
regional part of brain | 9.80e-15 | 53 |
brain grey matter | 1.81e-14 | 34 |
gray matter | 1.81e-14 | 34 |
telencephalon | 5.38e-14 | 34 |
brain | 9.16e-14 | 68 |
future brain | 9.16e-14 | 68 |
cerebral hemisphere | 9.37e-14 | 32 |
neural tube | 1.13e-13 | 56 |
neural rod | 1.13e-13 | 56 |
future spinal cord | 1.13e-13 | 56 |
neural keel | 1.13e-13 | 56 |
regional part of telencephalon | 1.32e-13 | 32 |
central nervous system | 2.15e-12 | 81 |
regional part of cerebral cortex | 2.20e-12 | 22 |
nervous system | 1.32e-11 | 89 |
neocortex | 2.16e-11 | 20 |
cerebral cortex | 5.05e-11 | 25 |
pallium | 5.05e-11 | 25 |
pre-chordal neural plate | 1.24e-10 | 61 |
neural plate | 2.87e-10 | 82 |
presumptive neural plate | 2.87e-10 | 82 |
neurectoderm | 8.68e-10 | 86 |
adult organism | 2.57e-08 | 114 |
tube | 7.86e-08 | 192 |