FFCP PHASE1:Hg19::chrX:1367460..1367489,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:1367460..1367489,+ | |||
|coexpression_cluster_id=C865 | |||
|description=CAGE_peak_at_chrX:1367460..1367489,+ | |description=CAGE_peak_at_chrX:1367460..1367489,+ | ||
|id=chrX:1367460..1367489,+ | |id=chrX:1367460..1367489,+ | ||
|ontology_enrichment_celltype=CL:0000839!1.33e-42!70;CL:0000766!1.42e-42!76;CL:0002057!6.07e-42!42;CL:0000557!6.10e-42!71;CL:0000860!6.91e-39!45;CL:0002194!4.13e-36!63;CL:0000576!4.13e-36!63;CL:0000040!4.13e-36!63;CL:0000559!4.13e-36!63;CL:0000763!5.84e-35!112;CL:0000049!5.84e-35!112;CL:0002009!7.03e-35!65;CL:0000738!8.03e-23!140;CL:0000037!1.12e-22!172;CL:0000566!1.12e-22!172;CL:0002031!5.08e-22!124;CL:0002032!5.17e-22!165;CL:0000837!5.17e-22!165;CL:0000988!4.01e-21!182;CL:0002087!3.80e-17!119;CL:0002274!7.29e-11!5;CL:0000457!7.29e-11!5;CL:0002191!7.29e-11!5;CL:0000097!7.29e-11!5;CL:0000831!7.29e-11!5;CL:0002028!7.29e-11!5;CL:0000840!5.05e-09!5;CL:0001029!5.05e-09!5;CL:0000784!1.68e-08!3;CL:0000451!2.33e-08!10;CL:0000134!6.50e-08!358;CL:0002320!1.19e-07!365 | |ontology_enrichment_celltype=CL:0000839!1.33e-42!70;CL:0000766!1.42e-42!76;CL:0002057!6.07e-42!42;CL:0000557!6.10e-42!71;CL:0000860!6.91e-39!45;CL:0002194!4.13e-36!63;CL:0000576!4.13e-36!63;CL:0000040!4.13e-36!63;CL:0000559!4.13e-36!63;CL:0000763!5.84e-35!112;CL:0000049!5.84e-35!112;CL:0002009!7.03e-35!65;CL:0000738!8.03e-23!140;CL:0000037!1.12e-22!172;CL:0000566!1.12e-22!172;CL:0002031!5.08e-22!124;CL:0002032!5.17e-22!165;CL:0000837!5.17e-22!165;CL:0000988!4.01e-21!182;CL:0002087!3.80e-17!119;CL:0002274!7.29e-11!5;CL:0000457!7.29e-11!5;CL:0002191!7.29e-11!5;CL:0000097!7.29e-11!5;CL:0000831!7.29e-11!5;CL:0002028!7.29e-11!5;CL:0000840!5.05e-09!5;CL:0001029!5.05e-09!5;CL:0000784!1.68e-08!3;CL:0000451!2.33e-08!10;CL:0000134!6.50e-08!358;CL:0002320!1.19e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.05e-76;33!CL:0002057;3.05e-76;33!CL:0000473;3.23e-54;39!CL:0000234;3.23e-54;39!CL:0000576;4.99e-37;48!CL:0000766;1.33e-28;69!CL:0000097;9.44e-16;5!CL:0000763;3.40e-15;100!CL:0002087;5.27e-11;104!CL:0000163;5.34e-09;9!CL:0000738;3.38e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.88e-64,42;CL:0002057,2.88e-64,42;CL:0000766,1.45e-59,72;CL:0000839,2.90e-59,66;CL:0000557,2.39e-58,67;CL:0000473,6.86e-56,48;CL:0000234,6.86e-56,48;CL:0002194,2.53e-49,59;CL:0000576,2.53e-49,59;CL:0000040,2.53e-49,59;CL:0000559,2.53e-49,59;CL:0002009,1.22e-47,61;CL:0000763,7.07e-39,108;CL:0000049,7.07e-39,108;CL:0002031,1.95e-31,120;CL:0000738,2.76e-30,136;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0002087,4.48e-24,115;CL:0000037,6.09e-24,168;CL:0000988,1.45e-22,177;CL:0000097,1.10e-15,5;CL:0002028,1.10e-15,5;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0000163,5.80e-09,9;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.61e-44;42!CL:0000049;2.07e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.01e-36!80;UBERON:0001474!7.63e-34!86;UBERON:0004765!3.99e-28!101;UBERON:0001434!3.99e-28!101;UBERON:0002390!8.37e-28!102;UBERON:0003061!8.37e-28!102;UBERON:0002193!6.77e-25!112;UBERON:0002405!4.03e-24!115;UBERON:0002204!4.35e-15!167;UBERON:0003081!1.53e-10!216;UBERON:0002240!2.45e-08!3;UBERON:0002384!2.73e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!1.01e-36!80;UBERON:0001474!7.63e-34!86;UBERON:0004765!3.99e-28!101;UBERON:0001434!3.99e-28!101;UBERON:0002390!8.37e-28!102;UBERON:0003061!8.37e-28!102;UBERON:0002193!6.77e-25!112;UBERON:0002405!4.03e-24!115;UBERON:0002204!4.35e-15!167;UBERON:0003081!1.53e-10!216;UBERON:0002240!2.45e-08!3;UBERON:0002384!2.73e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.56e-51,76;UBERON:0001474,2.96e-47,82;UBERON:0004765,7.87e-43,90;UBERON:0002405,2.30e-41,93;UBERON:0002390,4.05e-39,98;UBERON:0003061,4.05e-39,98;UBERON:0001434,2.78e-38,100;UBERON:0002193,3.04e-35,108;UBERON:0002204,9.66e-22,167;UBERON:0003081,2.53e-17,203;UBERON:0000926,5.71e-10,315;UBERON:0004120,5.71e-10,315;UBERON:0006603,5.71e-10,315;UBERON:0002384,5.20e-09,371 | |||
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|short_description=p@chrX:1367460..1367489,+ | |short_description=p@chrX:1367460..1367489,+ | ||
}} | }} |
Latest revision as of 06:05, 1 August 2015
Short description: | p@chrX:1367460..1367489, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:1367460..1367489, + |
Coexpression cluster: | C865_CD14_Neutrophils_Dendritic_placenta_cervical_epitheloid_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.88e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.88e-64 | 42 |
myeloid leukocyte | 1.45e-59 | 72 |
myeloid lineage restricted progenitor cell | 2.90e-59 | 66 |
granulocyte monocyte progenitor cell | 2.39e-58 | 67 |
defensive cell | 6.86e-56 | 48 |
phagocyte | 6.86e-56 | 48 |
monopoietic cell | 2.53e-49 | 59 |
monocyte | 2.53e-49 | 59 |
monoblast | 2.53e-49 | 59 |
promonocyte | 2.53e-49 | 59 |
macrophage dendritic cell progenitor | 1.22e-47 | 61 |
myeloid cell | 7.07e-39 | 108 |
common myeloid progenitor | 7.07e-39 | 108 |
hematopoietic lineage restricted progenitor cell | 1.95e-31 | 120 |
leukocyte | 2.76e-30 | 136 |
hematopoietic oligopotent progenitor cell | 4.08e-25 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-25 | 161 |
nongranular leukocyte | 4.48e-24 | 115 |
hematopoietic stem cell | 6.09e-24 | 168 |
hematopoietic cell | 1.45e-22 | 177 |
mast cell | 1.10e-15 | 5 |
basophil mast progenitor cell | 1.10e-15 | 5 |
mesenchymal cell | 1.30e-09 | 354 |
connective tissue cell | 2.34e-09 | 361 |
endocrine cell | 5.80e-09 | 9 |
motile cell | 1.85e-08 | 386 |
multi fate stem cell | 2.34e-07 | 427 |
somatic stem cell | 3.32e-07 | 433 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.56e-51 | 76 |
bone element | 2.96e-47 | 82 |
skeletal element | 7.87e-43 | 90 |
immune system | 2.30e-41 | 93 |
hematopoietic system | 4.05e-39 | 98 |
blood island | 4.05e-39 | 98 |
skeletal system | 2.78e-38 | 100 |
hemolymphoid system | 3.04e-35 | 108 |
musculoskeletal system | 9.66e-22 | 167 |
lateral plate mesoderm | 2.53e-17 | 203 |
mesoderm | 5.71e-10 | 315 |
mesoderm-derived structure | 5.71e-10 | 315 |
presumptive mesoderm | 5.71e-10 | 315 |
connective tissue | 5.20e-09 | 371 |