FFCP PHASE1:Hg19::chrX:70586140..70586218,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6872 | |EntrezGene=6872 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11535 | |HGNC=11535 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000276072_5end | |association_with_transcript=0bp_to_ENST00000276072_5end | ||
|cluster_id=chrX:70586140..70586218,+ | |||
|description=CAGE_peak_1_at_TAF1_5end | |description=CAGE_peak_1_at_TAF1_5end | ||
|id=chrX:70586140..70586218,+ | |id=chrX:70586140..70586218,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.29e-07!172;CL:0000566!2.29e-07!172;CL:0000838!7.60e-07!52 | |ontology_enrichment_celltype=CL:0000037!2.29e-07!172;CL:0000566!2.29e-07!172;CL:0000838!7.60e-07!52 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.60e-07,52;CL:0000037,8.03e-07,168 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.71e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.00e-30!115;UBERON:0002780!5.91e-15!41;UBERON:0001890!5.91e-15!41;UBERON:0006240!5.91e-15!41;UBERON:0001049!9.89e-15!57;UBERON:0005068!9.89e-15!57;UBERON:0006241!9.89e-15!57;UBERON:0007135!9.89e-15!57;UBERON:0003080!1.46e-14!42;UBERON:0000073!1.37e-12!94;UBERON:0001016!1.37e-12!94;UBERON:0001017!2.30e-12!82;UBERON:0001893!2.43e-12!34;UBERON:0002020!3.68e-12!34;UBERON:0003528!3.68e-12!34;UBERON:0005743!4.03e-12!86;UBERON:0002791!5.67e-12!33;UBERON:0000955!8.00e-12!69;UBERON:0006238!8.00e-12!69;UBERON:0001869!3.16e-11!32;UBERON:0002616!1.04e-10!59;UBERON:0002619!3.61e-10!22;UBERON:0002346!1.06e-09!90;UBERON:0001950!2.02e-09!20;UBERON:0003075!3.65e-09!86;UBERON:0007284!3.65e-09!86;UBERON:0000956!1.31e-08!25;UBERON:0000203!1.31e-08!25;UBERON:0003056!1.15e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!1.00e-30!115;UBERON:0002780!5.91e-15!41;UBERON:0001890!5.91e-15!41;UBERON:0006240!5.91e-15!41;UBERON:0001049!9.89e-15!57;UBERON:0005068!9.89e-15!57;UBERON:0006241!9.89e-15!57;UBERON:0007135!9.89e-15!57;UBERON:0003080!1.46e-14!42;UBERON:0000073!1.37e-12!94;UBERON:0001016!1.37e-12!94;UBERON:0001017!2.30e-12!82;UBERON:0001893!2.43e-12!34;UBERON:0002020!3.68e-12!34;UBERON:0003528!3.68e-12!34;UBERON:0005743!4.03e-12!86;UBERON:0002791!5.67e-12!33;UBERON:0000955!8.00e-12!69;UBERON:0006238!8.00e-12!69;UBERON:0001869!3.16e-11!32;UBERON:0002616!1.04e-10!59;UBERON:0002619!3.61e-10!22;UBERON:0002346!1.06e-09!90;UBERON:0001950!2.02e-09!20;UBERON:0003075!3.65e-09!86;UBERON:0007284!3.65e-09!86;UBERON:0000956!1.31e-08!25;UBERON:0000203!1.31e-08!25;UBERON:0003056!1.15e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.91e-11;41!UBERON:0001890;3.91e-11;41!UBERON:0001893;1.86e-10;34!UBERON:0003528;2.20e-10;34!UBERON:0002020;2.20e-10;34!UBERON:0002791;2.74e-10;32!UBERON:0002619;3.80e-10;22!UBERON:0001869;3.86e-10;32!UBERON:0001950;2.14e-09;20!UBERON:0000956;1.47e-08;25!UBERON:0000203;1.47e-08;25!UBERON:0000073;1.59e-08;53!UBERON:0002616;1.59e-08;53!UBERON:0007023;1.91e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.45e-30,114;UBERON:0001049,4.94e-15,56;UBERON:0005068,4.94e-15,56;UBERON:0006241,4.94e-15,56;UBERON:0007135,4.94e-15,56;UBERON:0002780,5.91e-15,41;UBERON:0001890,5.91e-15,41;UBERON:0003080,5.91e-15,41;UBERON:0006240,5.91e-15,41;UBERON:0000073,7.06e-14,53;UBERON:0002616,7.06e-14,53;UBERON:0001016,5.57e-13,89;UBERON:0001017,1.51e-12,81;UBERON:0001893,2.43e-12,34;UBERON:0003528,3.68e-12,34;UBERON:0002020,3.68e-12,34;UBERON:0000955,5.00e-12,68;UBERON:0006238,5.00e-12,68;UBERON:0002791,2.29e-11,32;UBERON:0001869,3.16e-11,32;UBERON:0002619,3.61e-10,22;UBERON:0002346,1.89e-09,86;UBERON:0001950,2.02e-09,20;UBERON:0003075,6.45e-09,82;UBERON:0007284,6.45e-09,82;UBERON:0000956,1.31e-08,25;UBERON:0000203,1.31e-08,25;UBERON:0003056,3.98e-08,61 | |||
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| ||
|short_description=p1@TAF1 | |short_description=p1@TAF1 | ||
}} | }} |
Latest revision as of 07:13, 16 September 2015
Short description: | p1@TAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000276072_5end |
EntrezGene: | TAF1 |
HGNC: | 11535 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.60e-07 | 52 |
hematopoietic stem cell | 8.03e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.45e-30 | 114 |
neural tube | 4.94e-15 | 56 |
neural rod | 4.94e-15 | 56 |
future spinal cord | 4.94e-15 | 56 |
neural keel | 4.94e-15 | 56 |
regional part of forebrain | 5.91e-15 | 41 |
forebrain | 5.91e-15 | 41 |
anterior neural tube | 5.91e-15 | 41 |
future forebrain | 5.91e-15 | 41 |
regional part of nervous system | 7.06e-14 | 53 |
regional part of brain | 7.06e-14 | 53 |
nervous system | 5.57e-13 | 89 |
central nervous system | 1.51e-12 | 81 |
telencephalon | 2.43e-12 | 34 |
brain grey matter | 3.68e-12 | 34 |
gray matter | 3.68e-12 | 34 |
brain | 5.00e-12 | 68 |
future brain | 5.00e-12 | 68 |
regional part of telencephalon | 2.29e-11 | 32 |
cerebral hemisphere | 3.16e-11 | 32 |
regional part of cerebral cortex | 3.61e-10 | 22 |
neurectoderm | 1.89e-09 | 86 |
neocortex | 2.02e-09 | 20 |
neural plate | 6.45e-09 | 82 |
presumptive neural plate | 6.45e-09 | 82 |
cerebral cortex | 1.31e-08 | 25 |
pallium | 1.31e-08 | 25 |
pre-chordal neural plate | 3.98e-08 | 61 |