FFCP PHASE1:Hg19::chr17:38610202..38610277,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:38610202..38610277,+
|short_description=p@chr17:38610202..38610277,+
|description=CAGE_peak_at_chr17:38610202..38610277,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:38610202..38610277,+ | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38610202..38610277,+ | |||
|id=chr17:38610202..38610277,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.61e-28!180;CL:0000222!3.45e-19!119;CL:0000183!7.38e-17!59;CL:0000057!1.81e-16!75;CL:0000680!2.60e-16!57;CL:0000056!2.60e-16!57;CL:0000355!2.60e-16!57;CL:0000187!5.55e-15!54;CL:0000393!4.57e-13!60;CL:0000211!4.57e-13!60;CL:0000192!2.19e-12!42;CL:0000514!2.19e-12!42;CL:0000359!1.30e-09!32;CL:0000220!1.03e-08!246;CL:0002321!1.30e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0000192;4.81e-10;43!CL:0000359;4.91e-10;32!CL:0000187;4.97e-09;55!CL:0000134;1.75e-08;55!CL:0000393;1.08e-07;61!CL:0000211;1.08e-07;61!CL:0002334;1.91e-07;12!CL:0000057;3.42e-07;73!CL:0000723;3.49e-07;61!CL:0002320;9.87e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.44e-21,121;CL:0000680,1.33e-17,58;CL:0000056,1.33e-17,58;CL:0000355,1.33e-17,58;CL:0000057,1.53e-17,76;CL:0000187,4.12e-16,55;CL:0000393,1.08e-13,61;CL:0000211,1.08e-13,61;CL:0000192,1.40e-13,43;CL:0000514,1.40e-13,43;CL:0000359,3.04e-10,32;CL:0000048,1.19e-08,427;CL:0000723,8.41e-08,433;CL:0002334,2.55e-07,12;CL:0000034,4.66e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;4.81e-10;43!CL:0000355;2.77e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.52e-22!143;UBERON:0002100!1.35e-19!216;UBERON:0000490!1.33e-18!138;UBERON:0003914!4.40e-18!118;UBERON:0004872!1.29e-17!84;UBERON:0000914!4.11e-17!83;UBERON:0002329!4.11e-17!83;UBERON:0003077!4.11e-17!83;UBERON:0003059!4.11e-17!83;UBERON:0007282!4.11e-17!83;UBERON:0009618!4.11e-17!83;UBERON:0007285!4.11e-17!83;UBERON:0002049!9.67e-17!79;UBERON:0007798!9.67e-17!79;UBERON:0002385!1.40e-16!63;UBERON:0001015!1.40e-16!63;UBERON:0000383!1.40e-16!63;UBERON:0001134!1.89e-16!61;UBERON:0002036!1.89e-16!61;UBERON:0003082!1.89e-16!61;UBERON:0004290!1.70e-15!70;UBERON:0000486!1.51e-14!82;UBERON:0003104!7.74e-14!238;UBERON:0009142!7.74e-14!238;UBERON:0000055!1.30e-13!69;UBERON:0001981!3.48e-13!60;UBERON:0007500!3.48e-13!60;UBERON:0004537!3.48e-13!60;UBERON:0006965!3.48e-13!60;UBERON:0001009!2.27e-12!113;UBERON:0004535!3.32e-12!110;UBERON:0000475!4.24e-11!365;UBERON:0000481!6.36e-11!347;UBERON:0001637!6.37e-11!42;UBERON:0003509!6.37e-11!42;UBERON:0004572!6.37e-11!42;UBERON:0000477!5.88e-10!286;UBERON:0004573!1.00e-09!33;UBERON:0004571!1.00e-09!33;UBERON:0000119!1.55e-08!312;UBERON:0000926!2.39e-08!448;UBERON:0004120!2.39e-08!448;UBERON:0006603!2.39e-08!448;UBERON:0000483!4.60e-08!309;UBERON:0004111!9.16e-08!241;UBERON:0009569!1.85e-07!113;UBERON:0000468!1.91e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.54e-10;33!UBERON:0004571;5.54e-10;33!UBERON:0001637;4.58e-09;42!UBERON:0003509;4.58e-09;42!UBERON:0004572;4.58e-09;42!UBERON:0002385;1.35e-08;31!UBERON:0001015;1.35e-08;31!UBERON:0000383;1.35e-08;31!UBERON:0007500;1.70e-07;56!UBERON:0001981;1.70e-07;56!UBERON:0004537;1.70e-07;56!UBERON:0002384;1.91e-07;198!UBERON:0001013;3.74e-07;14!UBERON:0002049;4.82e-07;75!UBERON:0007798;4.82e-07;75!UBERON:0000055;6.01e-07;65 | |||
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|phase1_expression=32.8837866479708,30.8304754403016,23.2574766758352,42.0307853083148,21.4541325325098,49.723295873721,32.9289841618804,13.2661173419635,15.6711376919903,0.491467873003018,2.79120467188971,0.436882744260345,0,26.1147004745698,41.0932745902616,4.70627602516243,7.8350288643117,7.30310090387373,3.41552959153355,0.861847406537515,4.08001382488506,1.25381888591235,0,0.684372125364421,1.12988375635323,0,0,0,0.393364276848904,0,0.154816123316076,0.919421224478927,1.204823675113,1.10926203050036,0,0,0,0,0,0,1.79132379391939,0,1.03030227053675,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,1.77901850772711,0.426730222566507,0,1.14950487990897,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0.339928028092699,0,0.34362744548263,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,4.87613732627923,8.71911117614727,0.639312809217652,25.6621798193042,44.6190740465942,54.8968306861522,3.1811437882044,13.6257763684738,0.756278537312543,3.76939975686359,3.95256535619067,1.76821751921912,0,0.370784442784429,0,0.174129737299267,0,0,0,0,2.58391129576717,2.58070378531837,2.42998351125316,4.52246353539208,4.61449379830897,6.32771496462155,3.13492449805216,1.03366703667732,2.13459757612026,1.33888245105868,5.63961043952806,3.04108842287405,6.83373761134875,2.94130464276695,8.1014194788176,3.48268940307911,2.91888184414021,1.91439516821648,1.53316637465883,0.949265659568129,4.58004359826018,0,0,0,7.45457927542978,4.55869841992487,2.1185468930115,10.8997915884549,4.965357350777,13.4562624034154,9.60740961567345,7.89336154934912,4.04574346019696,3.23305612967251,4.08654757783647,13.0167387774641,14.404398112,1.17160715916898,5.61888138294577,0.570471821544449,4.63290909710583,0.587172493218824,0.485618833104395,0.140450806702248,10.4118627339996,4.42203542322365,20.5618304539773,38.0160914330257,53.4096567241683,4.55080680969013,8.62341770179486,1.0100166837244,1.50142223846357,1.38532057742091,9.2185300384976,47.199120553049,48.2264169090176,1.13432183160021,2.87023417102179,8.96941033037983,11.6562545637759,4.50136644126603,7.4197821051676,3.09168648054755,13.0281799432113,1.0126579934476,3.60516919096435,2.01947019395292,10.5857383438644,11.4768700341356,3.19508633264953,3.22406714328449,9.6649537616978,0.773043412653187,0.545492241181669,0.860413786167011,0.243947412259191,0.530119073285941,1.04574548582567,0.621966330092223,1.00928340350251,1.45990943630332,1.56449532329816,7.07565032012174,0,9.28735856063958,15.1594691150613,0.236613600079688,0.168584690078102,0,0,0,0.237270619111097,0,0,0.38474715694639,9.59602091012043,2.80483547606892,2.4694440679884,7.3504355692771,26.6185573125845,11.7939266001315,8.86184860022106,0,0.245976877086227,1.71567810298526,0.109750285408626,0,0.100528972411631,0.555530670951178,1.62904152655162,1.03993478527958,2.88662684050547,0.231860809950154,1.17408694235822,1.44366447761074,1.85194205030644,3.80508304469197,3.1608175918371,0,0,0,0.148631162288728,0.93733833986777,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0.190493682876507,0,0,6.84289784090821,0.308482478109971,0.901029173531752,0.285826432630578,3.58819469905154,4.79556075716608,5.1336800074665,1.29271715757778,3.57656445851882,7.607724773004,6.91439103120663,14.5610411675913,8.74505072491283,5.67396528093113,12.5218424137567,6.43400971461664,13.0229185293946,11.5253647149308,1.62868092146868,6.75244702610837,9.50342247520115,7.23454504943007,6.10073421020206,15.0959216684906,0,0,0,3.59437283237374,24.1210065251639,1.42636905040718,14.0437867467552,26.3009692864491,4.65558504423729,0,0,0.215627574859517,0,0,0,0,0.335032530668698,0,0,0,0,29.6913409960319,60.0204625271612,21.7012018959788,15.8057854763413,24.266342476414,14.3509197680881,8.55132329446806,19.260550382574,97.7852267440735,13.4514992680256,5.31380478828349,7.55913591020983,8.68836144680829,18.0137064865721,7.89229874764969,0,0,0,9.39695471483404,3.32870879020994,4.5358543999452,18.1118699707707,5.06424511850606,33.9598714264019,26.0122472989073,18.933168215468,13.0291676126322,54.9146845846467,2.31314540703983,11.7190738706664,3.12083192852475,9.34657972530518,7.43746422143739,0.241718899183244,1.20303882181971,0.644566922551274,5.39627906373652,4.91646153618136,10.2277043668351,0.451199612907412,1.00119938235739,3.13739907670742,2.92278449306521,1.05551628892876,10.2360045663807,3.91215522135986,1.72732732881711,18.5072703228347,5.1479823133332,12.0405545725165,0.764628819135115,0,1.34324852833307,0,0,0,1.31205858279882,0,4.73988653579522,0.0915694648183434,0.247528499761764,0.574265537996172,0,12.8547143875328,7.54031602678551,7.08623638727364,7.21467271212809,2.61889487720608,6.23037420235987,15.5167862488225,4.68746450788555,2.1367688555217,0.330569830721956,0.384380134730212,0.255225424989168,1.0115778085555,19.0586675211887,16.9998667288546,7.6674099717666,3.38836938193698,2.12922412126809,2.60979897622522,4.44778125849408,5.1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| ||
|short_description=p@chr17:38610202..38610277,+ | |||
}} | }} |
Latest revision as of 16:27, 25 July 2015
Short description: | p@chr17:38610202..38610277, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38610202..38610277, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.44e-21 | 121 |
muscle precursor cell | 1.33e-17 | 58 |
myoblast | 1.33e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.33e-17 | 58 |
fibroblast | 1.53e-17 | 76 |
muscle cell | 4.12e-16 | 55 |
electrically responsive cell | 1.08e-13 | 61 |
electrically active cell | 1.08e-13 | 61 |
smooth muscle cell | 1.40e-13 | 43 |
smooth muscle myoblast | 1.40e-13 | 43 |
vascular associated smooth muscle cell | 3.04e-10 | 32 |
multi fate stem cell | 1.19e-08 | 427 |
somatic stem cell | 8.41e-08 | 433 |
preadipocyte | 2.55e-07 | 12 |
stem cell | 4.66e-07 | 441 |