FFCP PHASE1:Hg19::chr22:37678492..37678497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27128 | |EntrezGene=27128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9505 | |HGNC=9505 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UIA0 | |UniProt=Q9UIA0 | ||
|association_with_transcript=0bp_to_ENST00000422721,NM_013385,uc003ard.3,uc003are.2,uc003arf.2,uc010gxe.2,uc011amw.1_5end | |association_with_transcript=0bp_to_ENST00000422721,NM_013385,uc003ard.3,uc003are.2,uc003arf.2,uc010gxe.2,uc011amw.1_5end | ||
|cluster_id=chr22:37678492..37678497,+ | |||
|description=CAGE_peak_3_at_CYTH4_5end | |description=CAGE_peak_3_at_CYTH4_5end | ||
|id=chr22:37678492..37678497,+ | |id=chr22:37678492..37678497,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.70e-41!140;CL:0000037!3.41e-41!172;CL:0000566!3.41e-41!172;CL:0002031!1.11e-37!124;CL:0002032!1.33e-37!165;CL:0000837!1.33e-37!165;CL:0000988!2.28e-37!182;CL:0002087!1.40e-36!119;CL:0000557!5.07e-30!71;CL:0000766!5.46e-30!76;CL:0000839!6.94e-29!70;CL:0000763!1.93e-26!112;CL:0000049!1.93e-26!112;CL:0002194!4.76e-25!63;CL:0000576!4.76e-25!63;CL:0000040!4.76e-25!63;CL:0000559!4.76e-25!63;CL:0002009!7.19e-24!65;CL:0002057!1.74e-13!42;CL:0000860!4.43e-12!45;CL:0000838!2.07e-10!52;CL:0000542!4.50e-10!53;CL:0000051!4.50e-10!53;CL:0000791!2.76e-08!18;CL:0000789!2.76e-08!18;CL:0002420!2.76e-08!18;CL:0002419!2.76e-08!18;CL:0000790!2.76e-08!18;CL:0000084!3.35e-08!25;CL:0000827!3.35e-08!25;CL:0002274!1.48e-07!5;CL:0000457!1.48e-07!5;CL:0002191!1.48e-07!5;CL:0000097!1.48e-07!5;CL:0000831!1.48e-07!5;CL:0002028!1.48e-07!5;CL:0002393!1.73e-07!9;CL:0002397!1.73e-07!9;CL:0000625!6.24e-07!11;CL:0000134!7.83e-07!358 | |ontology_enrichment_celltype=CL:0000738!2.70e-41!140;CL:0000037!3.41e-41!172;CL:0000566!3.41e-41!172;CL:0002031!1.11e-37!124;CL:0002032!1.33e-37!165;CL:0000837!1.33e-37!165;CL:0000988!2.28e-37!182;CL:0002087!1.40e-36!119;CL:0000557!5.07e-30!71;CL:0000766!5.46e-30!76;CL:0000839!6.94e-29!70;CL:0000763!1.93e-26!112;CL:0000049!1.93e-26!112;CL:0002194!4.76e-25!63;CL:0000576!4.76e-25!63;CL:0000040!4.76e-25!63;CL:0000559!4.76e-25!63;CL:0002009!7.19e-24!65;CL:0002057!1.74e-13!42;CL:0000860!4.43e-12!45;CL:0000838!2.07e-10!52;CL:0000542!4.50e-10!53;CL:0000051!4.50e-10!53;CL:0000791!2.76e-08!18;CL:0000789!2.76e-08!18;CL:0002420!2.76e-08!18;CL:0002419!2.76e-08!18;CL:0000790!2.76e-08!18;CL:0000084!3.35e-08!25;CL:0000827!3.35e-08!25;CL:0002274!1.48e-07!5;CL:0000457!1.48e-07!5;CL:0002191!1.48e-07!5;CL:0000097!1.48e-07!5;CL:0000831!1.48e-07!5;CL:0002028!1.48e-07!5;CL:0002393!1.73e-07!9;CL:0002397!1.73e-07!9;CL:0000625!6.24e-07!11;CL:0000134!7.83e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.78e-25;3!CL:0002619;1.11e-24;3!CL:0000235;5.61e-22;6!CL:0000451;2.76e-18;10!CL:0000840;1.03e-12;5!CL:0002032;2.88e-09;1!CL:0000557;2.88e-09;1!CL:0000990;1.21e-08;8!CL:0000763;2.61e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.88e-25,3;CL:0002619,6.86e-25,3;CL:0000557,6.12e-24,67;CL:0000766,3.30e-22,72;CL:0000235,4.92e-22,6;CL:0000839,4.29e-21,66;CL:0000763,9.48e-21,108;CL:0000049,9.48e-21,108;CL:0002194,1.58e-20,59;CL:0000576,1.58e-20,59;CL:0000040,1.58e-20,59;CL:0000559,1.58e-20,59;CL:0002009,8.58e-20,61;CL:0000451,2.58e-18,10;CL:0000037,1.83e-17,168;CL:0000988,2.13e-16,177;CL:0000738,6.96e-16,136;CL:0002032,1.35e-14,161;CL:0000837,1.35e-14,161;CL:0000840,8.12e-13,5;CL:0001029,8.12e-13,5;CL:0002031,2.83e-12,120;CL:0002087,3.73e-11,115;CL:0000990,1.03e-08,8;CL:0000473,1.56e-07,48;CL:0000234,1.56e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.88e-09;1!CL:0000049;5.77e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.15e-26!102;UBERON:0003061!3.15e-26!102;UBERON:0002371!6.62e-25!80;UBERON:0002193!8.33e-25!112;UBERON:0001474!4.12e-22!86;UBERON:0002405!2.10e-17!115;UBERON:0004765!1.18e-16!101;UBERON:0001434!1.18e-16!101;UBERON:0007023!8.86e-15!115;UBERON:0003081!3.42e-08!216;UBERON:0002204!1.60e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!3.15e-26!102;UBERON:0003061!3.15e-26!102;UBERON:0002371!6.62e-25!80;UBERON:0002193!8.33e-25!112;UBERON:0001474!4.12e-22!86;UBERON:0002405!2.10e-17!115;UBERON:0004765!1.18e-16!101;UBERON:0001434!1.18e-16!101;UBERON:0007023!8.86e-15!115;UBERON:0003081!3.42e-08!216;UBERON:0002204!1.60e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.88e-09;1!UBERON:0001153;2.88e-09;1!UBERON:0009854;2.88e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.91e-21,76;UBERON:0001474,3.96e-19,82;UBERON:0002390,6.09e-18,98;UBERON:0003061,6.09e-18,98;UBERON:0004765,3.29e-17,90;UBERON:0002405,1.42e-16,93;UBERON:0002193,4.97e-16,108;UBERON:0001434,3.08e-15,100;UBERON:0002204,2.36e-09,167;UBERON:0001154,4.50e-09,1;UBERON:0001153,4.50e-09,1;UBERON:0001045,4.50e-09,1;UBERON:0003081,3.28e-07,203 | |||
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| ||
|short_description=p3@CYTH4 | |short_description=p3@CYTH4 | ||
}} | }} |
Latest revision as of 04:54, 20 September 2015
Short description: | p3@CYTH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYTH4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000422721, NM_013385, uc003ard.3, uc003are.2, uc003arf.2, uc010gxe.2, uc011amw.1_5end |
EntrezGene: | CYTH4 |
HGNC: | 9505 |
UniProt: | Q9UIA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.88e-25 | 3 |
adult endothelial progenitor cell | 6.86e-25 | 3 |
granulocyte monocyte progenitor cell | 6.12e-24 | 67 |
myeloid leukocyte | 3.30e-22 | 72 |
macrophage | 4.92e-22 | 6 |
myeloid lineage restricted progenitor cell | 4.29e-21 | 66 |
myeloid cell | 9.48e-21 | 108 |
common myeloid progenitor | 9.48e-21 | 108 |
monopoietic cell | 1.58e-20 | 59 |
monocyte | 1.58e-20 | 59 |
monoblast | 1.58e-20 | 59 |
promonocyte | 1.58e-20 | 59 |
macrophage dendritic cell progenitor | 8.58e-20 | 61 |
dendritic cell | 2.58e-18 | 10 |
hematopoietic stem cell | 1.83e-17 | 168 |
hematopoietic cell | 2.13e-16 | 177 |
leukocyte | 6.96e-16 | 136 |
hematopoietic oligopotent progenitor cell | 1.35e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.35e-14 | 161 |
immature conventional dendritic cell | 8.12e-13 | 5 |
common dendritic progenitor | 8.12e-13 | 5 |
hematopoietic lineage restricted progenitor cell | 2.83e-12 | 120 |
nongranular leukocyte | 3.73e-11 | 115 |
conventional dendritic cell | 1.03e-08 | 8 |
defensive cell | 1.56e-07 | 48 |
phagocyte | 1.56e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.91e-21 | 76 |
bone element | 3.96e-19 | 82 |
hematopoietic system | 6.09e-18 | 98 |
blood island | 6.09e-18 | 98 |
skeletal element | 3.29e-17 | 90 |
immune system | 1.42e-16 | 93 |
hemolymphoid system | 4.97e-16 | 108 |
skeletal system | 3.08e-15 | 100 |
musculoskeletal system | 2.36e-09 | 167 |
vermiform appendix | 4.50e-09 | 1 |
caecum | 4.50e-09 | 1 |
midgut | 4.50e-09 | 1 |
lateral plate mesoderm | 3.28e-07 | 203 |