FFCP PHASE1:Hg19::chr17:79679299..79679359,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1468,6182 | |EntrezGene=1468,6182 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10378,10980 | |HGNC=10378,10980 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000331531_5end | |association_with_transcript=0bp_to_ENST00000331531_5end | ||
|cluster_id=chr17:79679299..79679359,+ | |||
|description=CAGE_peak_3_at_MRPL12_5end,CAGE_peak_3_at_SLC25A10_5end | |description=CAGE_peak_3_at_MRPL12_5end,CAGE_peak_3_at_SLC25A10_5end | ||
|id=chr17:79679299..79679359,+ | |id=chr17:79679299..79679359,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.14e-30!254;CL:0002321!3.55e-15!248;CL:0000220!8.23e-15!246;CL:0000223!1.55e-08!59;CL:0000548!2.67e-08!679;CL:0000004!2.67e-08!679;CL:0000255!2.67e-08!679;CL:0000076!6.12e-08!62;CL:0000012!6.73e-08!682 | |ontology_enrichment_celltype=CL:0000066!2.14e-30!254;CL:0002321!3.55e-15!248;CL:0000220!8.23e-15!246;CL:0000223!1.55e-08!59;CL:0000548!2.67e-08!679;CL:0000004!2.67e-08!679;CL:0000255!2.67e-08!679;CL:0000076!6.12e-08!62;CL:0000012!6.73e-08!682 | ||
|ontology_enrichment_celltype_v019=CL:1000449;5.42e-07;15!CL:1000507;9.29e-07;10!CL:1000494;9.29e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.75e-31,253;CL:0002321,6.70e-15,250;CL:0000223,4.00e-09,58;CL:0000076,1.97e-07,63;CL:1000449,5.67e-07,15;CL:1000507,9.89e-07,10;CL:1000494,9.89e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.02e-24!235;DOID:14566!3.58e-23!239;DOID:0050687!8.49e-15!143;DOID:305!2.67e-14!106;DOID:0050686!6.90e-13!137;DOID:2531!1.85e-08!51;DOID:0060083!1.85e-08!51;DOID:1240!4.10e-08!39;DOID:299!4.48e-08!25;DOID:8692!4.52e-07!31 | |ontology_enrichment_disease=DOID:162!1.02e-24!235;DOID:14566!3.58e-23!239;DOID:0050687!8.49e-15!143;DOID:305!2.67e-14!106;DOID:0050686!6.90e-13!137;DOID:2531!1.85e-08!51;DOID:0060083!1.85e-08!51;DOID:1240!4.10e-08!39;DOID:299!4.48e-08!25;DOID:8692!4.52e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:299;4.43e-08;25!DOID:8692;7.11e-07;31!DOID:1240;8.99e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.08e-24,235;DOID:14566,4.45e-23,239;DOID:0050687,8.62e-15,143;DOID:305,2.73e-14,106;DOID:0050686,8.10e-13,137;DOID:2531,1.97e-08,51;DOID:0060083,1.97e-08,51;DOID:1240,3.86e-08,39;DOID:299,4.21e-08,25;DOID:8692,4.29e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!7.19e-12!238;UBERON:0009142!7.19e-12!238;UBERON:0000077!1.69e-10!130;UBERON:0009569!4.59e-10!113;UBERON:0001041!5.33e-10!98;UBERON:0004921!6.43e-10!129;UBERON:0004185!6.43e-10!129;UBERON:0005177!6.49e-10!107;UBERON:0004119!7.19e-10!169;UBERON:0000925!7.19e-10!169;UBERON:0006595!7.19e-10!169;UBERON:0005172!9.44e-10!55;UBERON:0005173!9.44e-10!55;UBERON:0001007!2.72e-09!155;UBERON:0001555!2.72e-09!155;UBERON:0007026!2.72e-09!155;UBERON:0003914!4.54e-09!118;UBERON:0000481!1.37e-08!347;UBERON:0001048!8.86e-08!168;UBERON:0000119!1.15e-07!312;UBERON:0000072!1.44e-07!46;UBERON:0002100!1.55e-07!216;UBERON:0000483!1.97e-07!309;UBERON:0005911!2.77e-07!82;UBERON:0001737!3.58e-07!9;UBERON:0008947!4.00e-07!38;UBERON:0003258!4.00e-07!38;UBERON:0002417!4.84e-07!61;UBERON:0000916!4.84e-07!61;UBERON:0002113!4.95e-07!27;UBERON:0003918!4.95e-07!27;UBERON:0005095!4.95e-07!27;UBERON:0007687!4.95e-07!27;UBERON:0000490!5.29e-07!138;UBERON:0006554!9.45e-07!44 | |ontology_enrichment_uberon=UBERON:0003104!7.19e-12!238;UBERON:0009142!7.19e-12!238;UBERON:0000077!1.69e-10!130;UBERON:0009569!4.59e-10!113;UBERON:0001041!5.33e-10!98;UBERON:0004921!6.43e-10!129;UBERON:0004185!6.43e-10!129;UBERON:0005177!6.49e-10!107;UBERON:0004119!7.19e-10!169;UBERON:0000925!7.19e-10!169;UBERON:0006595!7.19e-10!169;UBERON:0005172!9.44e-10!55;UBERON:0005173!9.44e-10!55;UBERON:0001007!2.72e-09!155;UBERON:0001555!2.72e-09!155;UBERON:0007026!2.72e-09!155;UBERON:0003914!4.54e-09!118;UBERON:0000481!1.37e-08!347;UBERON:0001048!8.86e-08!168;UBERON:0000119!1.15e-07!312;UBERON:0000072!1.44e-07!46;UBERON:0002100!1.55e-07!216;UBERON:0000483!1.97e-07!309;UBERON:0005911!2.77e-07!82;UBERON:0001737!3.58e-07!9;UBERON:0008947!4.00e-07!38;UBERON:0003258!4.00e-07!38;UBERON:0002417!4.84e-07!61;UBERON:0000916!4.84e-07!61;UBERON:0002113!4.95e-07!27;UBERON:0003918!4.95e-07!27;UBERON:0005095!4.95e-07!27;UBERON:0007687!4.95e-07!27;UBERON:0000490!5.29e-07!138;UBERON:0006554!9.45e-07!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.49e-08;24!UBERON:0011143;1.49e-08;24!UBERON:0006554;3.96e-08;30!UBERON:0001008;3.96e-08;30!UBERON:0001737;3.18e-07;9!UBERON:0001557;3.18e-07;9!UBERON:0005172;5.01e-07;52!UBERON:0005173;5.01e-07;52!UBERON:0006555;5.42e-07;15!UBERON:0004819;5.42e-07;15!UBERON:0001285;5.42e-07;15!UBERON:0007684;5.42e-07;15!UBERON:0000072;6.83e-07;37!UBERON:0004211;9.29e-07;10!UBERON:0009773;9.29e-07;10!UBERON:0001231;9.29e-07;10!UBERON:0004810;9.29e-07;10 | |||
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| ||
|short_description=p3@MRPL12,p3@SLC25A10 | |short_description=p3@MRPL12,p3@SLC25A10 | ||
}} | }} |
Latest revision as of 08:14, 18 September 2015
Short description: | p3@MRPL12, p3@SLC25A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MRPL12_5end, CAGE_peak_3_at_SLC25A10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000331531_5end |
EntrezGene: | 1468,6182 |
HGNC: | 10980&submit=Submit 10378, 10980 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.75e-31 | 253 |
embryonic cell | 6.70e-15 | 250 |
endodermal cell | 4.00e-09 | 58 |
squamous epithelial cell | 1.97e-07 | 63 |
epithelial cell of nephron | 5.67e-07 | 15 |
kidney tubule cell | 9.89e-07 | 10 |
nephron tubule epithelial cell | 9.89e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.08e-24 | 235 |
disease of cellular proliferation | 4.45e-23 | 239 |
cell type cancer | 8.62e-15 | 143 |
carcinoma | 2.73e-14 | 106 |
organ system cancer | 8.10e-13 | 137 |
hematologic cancer | 1.97e-08 | 51 |
immune system cancer | 1.97e-08 | 51 |
leukemia | 3.86e-08 | 39 |
adenocarcinoma | 4.21e-08 | 25 |
myeloid leukemia | 4.29e-07 | 31 |