FFCP PHASE1:Hg19::chr19:57269846..57269858,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:57269846..57269858,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_at_chr19:57269846..57269858,- | |description=CAGE_peak_at_chr19:57269846..57269858,- | ||
|id=chr19:57269846..57269858,- | |id=chr19:57269846..57269858,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.32e-26;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!1.90e-38!4;UBERON:0002435!1.90e-38!4;UBERON:0000204!1.90e-38!4;UBERON:0010082!1.90e-38!4;UBERON:0000007!4.29e-34!2;UBERON:0000349!3.49e-30!5;UBERON:0002308!5.47e-30!9;UBERON:0000125!5.47e-30!9;UBERON:0002420!5.89e-30!9;UBERON:0007245!5.89e-30!9;UBERON:0010009!5.89e-30!9;UBERON:0010011!5.89e-30!9;UBERON:0000454!5.89e-30!9;UBERON:0001049!1.14e-27!57;UBERON:0005068!1.14e-27!57;UBERON:0006241!1.14e-27!57;UBERON:0007135!1.14e-27!57;UBERON:0002780!1.16e-24!41;UBERON:0001890!1.16e-24!41;UBERON:0006240!1.16e-24!41;UBERON:0003080!4.46e-24!42;UBERON:0005383!1.68e-23!3;UBERON:0005382!1.68e-23!3;UBERON:0009663!2.59e-22!7;UBERON:0002616!1.27e-21!59;UBERON:0001017!6.77e-19!82;UBERON:0001874!3.16e-18!1;UBERON:0003075!3.22e-18!86;UBERON:0007284!3.22e-18!86;UBERON:0000955!3.52e-18!69;UBERON:0006238!3.52e-18!69;UBERON:0001882!3.75e-18!1;UBERON:0005403!3.75e-18!1;UBERON:0005743!5.28e-18!86;UBERON:0001869!6.96e-18!32;UBERON:0003296!1.33e-17!4;UBERON:0010133!1.33e-17!4;UBERON:0007190!1.70e-17!1;UBERON:0002346!2.19e-17!90;UBERON:0002020!7.01e-17!34;UBERON:0003528!7.01e-17!34;UBERON:0001893!7.42e-17!34;UBERON:0003056!1.48e-16!61;UBERON:0000073!2.90e-16!94;UBERON:0001016!2.90e-16!94;UBERON:0007023!1.29e-13!115;UBERON:0002791!2.64e-12!33;UBERON:0001894!1.77e-10!7;UBERON:0006222!1.77e-10!7;UBERON:0000033!5.02e-10!123;UBERON:0001873!7.98e-10!2;UBERON:0010122!7.98e-10!2;UBERON:0000153!1.57e-09!129;UBERON:0007811!1.57e-09!129;UBERON:0001954!1.57e-09!2;UBERON:0003022!1.57e-09!2;UBERON:0002421!1.57e-09!2;UBERON:0002600!1.57e-09!2;UBERON:0002148!1.71e-09!2;UBERON:0009662!1.71e-09!2;UBERON:0001876!1.86e-09!2;UBERON:0000025!2.19e-09!194;UBERON:0004121!8.33e-09!169;UBERON:0000924!1.39e-08!173;UBERON:0006601!1.39e-08!173;UBERON:0004111!2.30e-07!241;UBERON:0002240!8.15e-07!3;UBERON:0000988!9.64e-07!3;UBERON:0006331!9.64e-07!3 | |ontology_enrichment_uberon=UBERON:0000369!1.90e-38!4;UBERON:0002435!1.90e-38!4;UBERON:0000204!1.90e-38!4;UBERON:0010082!1.90e-38!4;UBERON:0000007!4.29e-34!2;UBERON:0000349!3.49e-30!5;UBERON:0002308!5.47e-30!9;UBERON:0000125!5.47e-30!9;UBERON:0002420!5.89e-30!9;UBERON:0007245!5.89e-30!9;UBERON:0010009!5.89e-30!9;UBERON:0010011!5.89e-30!9;UBERON:0000454!5.89e-30!9;UBERON:0001049!1.14e-27!57;UBERON:0005068!1.14e-27!57;UBERON:0006241!1.14e-27!57;UBERON:0007135!1.14e-27!57;UBERON:0002780!1.16e-24!41;UBERON:0001890!1.16e-24!41;UBERON:0006240!1.16e-24!41;UBERON:0003080!4.46e-24!42;UBERON:0005383!1.68e-23!3;UBERON:0005382!1.68e-23!3;UBERON:0009663!2.59e-22!7;UBERON:0002616!1.27e-21!59;UBERON:0001017!6.77e-19!82;UBERON:0001874!3.16e-18!1;UBERON:0003075!3.22e-18!86;UBERON:0007284!3.22e-18!86;UBERON:0000955!3.52e-18!69;UBERON:0006238!3.52e-18!69;UBERON:0001882!3.75e-18!1;UBERON:0005403!3.75e-18!1;UBERON:0005743!5.28e-18!86;UBERON:0001869!6.96e-18!32;UBERON:0003296!1.33e-17!4;UBERON:0010133!1.33e-17!4;UBERON:0007190!1.70e-17!1;UBERON:0002346!2.19e-17!90;UBERON:0002020!7.01e-17!34;UBERON:0003528!7.01e-17!34;UBERON:0001893!7.42e-17!34;UBERON:0003056!1.48e-16!61;UBERON:0000073!2.90e-16!94;UBERON:0001016!2.90e-16!94;UBERON:0007023!1.29e-13!115;UBERON:0002791!2.64e-12!33;UBERON:0001894!1.77e-10!7;UBERON:0006222!1.77e-10!7;UBERON:0000033!5.02e-10!123;UBERON:0001873!7.98e-10!2;UBERON:0010122!7.98e-10!2;UBERON:0000153!1.57e-09!129;UBERON:0007811!1.57e-09!129;UBERON:0001954!1.57e-09!2;UBERON:0003022!1.57e-09!2;UBERON:0002421!1.57e-09!2;UBERON:0002600!1.57e-09!2;UBERON:0002148!1.71e-09!2;UBERON:0009662!1.71e-09!2;UBERON:0001876!1.86e-09!2;UBERON:0000025!2.19e-09!194;UBERON:0004121!8.33e-09!169;UBERON:0000924!1.39e-08!173;UBERON:0006601!1.39e-08!173;UBERON:0004111!2.30e-07!241;UBERON:0002240!8.15e-07!3;UBERON:0000988!9.64e-07!3;UBERON:0006331!9.64e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.08e-110;4!UBERON:0002435;1.08e-110;4!UBERON:0000204;1.08e-110;4!UBERON:0005383;1.71e-66;3!UBERON:0005382;1.71e-66;3!UBERON:0009663;7.65e-64;7!UBERON:0001874;2.42e-50;1!UBERON:0001882;5.12e-50;1!UBERON:0005403;5.12e-50;1!UBERON:0002420;6.09e-50;9!UBERON:0000125;6.09e-50;9!UBERON:0007245;6.09e-50;9!UBERON:0002308;6.09e-50;9!UBERON:0010009;6.09e-50;9!UBERON:0010011;6.09e-50;9!UBERON:0000454;6.09e-50;9!UBERON:0001873;4.32e-26;2!UBERON:0002791;6.05e-15;32!UBERON:0001869;2.51e-13;32!UBERON:0003528;2.52e-13;34!UBERON:0002020;2.52e-13;34!UBERON:0001893;1.61e-12;34!UBERON:0000349;3.42e-11;5!UBERON:0002780;6.23e-10;41!UBERON:0001890;6.23e-10;41!UBERON:0000073;1.90e-08;53!UBERON:0002616;1.90e-08;53!UBERON:0000955;3.47e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,8.91e-111,4;UBERON:0002435,8.91e-111,4;UBERON:0000204,8.91e-111,4;UBERON:0010082,8.91e-111,4;UBERON:0005383,1.71e-66,3;UBERON:0005382,1.71e-66,3;UBERON:0009663,6.87e-64,7;UBERON:0001874,2.42e-50,1;UBERON:0001882,3.99e-50,1;UBERON:0005403,3.99e-50,1;UBERON:0002420,5.60e-50,9;UBERON:0000125,5.60e-50,9;UBERON:0007245,5.60e-50,9;UBERON:0002308,5.60e-50,9;UBERON:0010009,5.60e-50,9;UBERON:0010011,5.60e-50,9;UBERON:0000454,5.60e-50,9;UBERON:0001873,4.32e-26,2;UBERON:0010122,4.32e-26,2;UBERON:0002791,2.01e-14,32;UBERON:0001869,2.01e-14,32;UBERON:0003528,1.18e-13,34;UBERON:0002020,1.18e-13,34;UBERON:0001893,1.18e-13,34;UBERON:0002780,1.56e-11,41;UBERON:0001890,1.56e-11,41;UBERON:0003080,1.56e-11,41;UBERON:0006240,1.56e-11,41;UBERON:0000349,3.26e-11,5;UBERON:0000073,3.61e-09,53;UBERON:0002616,3.61e-09,53;UBERON:0001049,9.89e-09,56;UBERON:0005068,9.89e-09,56;UBERON:0006241,9.89e-09,56;UBERON:0007135,9.89e-09,56;UBERON:0003056,4.28e-08,61;UBERON:0007023,8.86e-08,114;UBERON:0000955,2.91e-07,68;UBERON:0006238,2.91e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63280412439744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79841830270087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20336525358812,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.91064876540519,0,0,0,0,0,0,0,0,5.34193005714407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63280412439744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79841830270087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20336525358812,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.91064876540519,0,0,0,0,0,0,0,0,5.34193005714407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:57269846..57269858,- | |short_description=p@chr19:57269846..57269858,- | ||
}} | }} |
Latest revision as of 17:43, 27 July 2015
Short description: | p@chr19:57269846..57269858, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:57269846..57269858, - |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data