FFCP PHASE1:Hg19::chr1:569901..569922,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=145bp_to_ENST00000416718_5end | |association_with_transcript=145bp_to_ENST00000416718_5end | ||
|cluster_id=chr1:569901..569922,+ | |||
|coexpression_cluster_id=C180 | |||
|description=CAGE_peak_1_at_ENST00000416718_5end | |description=CAGE_peak_1_at_ENST00000416718_5end | ||
|id=chr1:569901..569922,+ | |id=chr1:569901..569922,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.16e-08!239;DOID:162!4.36e-08!235;DOID:0050686!2.92e-07!137 | |ontology_enrichment_disease=DOID:14566!2.16e-08!239;DOID:162!4.36e-08!235;DOID:0050686!2.92e-07!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.74e-14!115;UBERON:0001049!1.91e-12!57;UBERON:0005068!1.91e-12!57;UBERON:0006241!1.91e-12!57;UBERON:0007135!1.91e-12!57;UBERON:0000073!5.97e-11!94;UBERON:0001016!5.97e-11!94;UBERON:0001017!1.01e-10!82;UBERON:0000955!1.12e-10!69;UBERON:0006238!1.12e-10!69;UBERON:0002780!1.57e-10!41;UBERON:0001890!1.57e-10!41;UBERON:0006240!1.57e-10!41;UBERON:0003080!1.93e-10!42;UBERON:0005743!4.26e-10!86;UBERON:0002020!5.59e-10!34;UBERON:0003528!5.59e-10!34;UBERON:0002616!1.38e-09!59;UBERON:0001869!4.12e-09!32;UBERON:0001893!5.55e-09!34;UBERON:0002791!5.61e-09!33;UBERON:0003075!7.46e-09!86;UBERON:0007284!7.46e-09!86;UBERON:0002619!8.12e-09!22;UBERON:0002346!8.84e-09!90;UBERON:0001950!8.76e-08!20;UBERON:0000956!4.62e-07!25;UBERON:0000203!4.62e-07!25;UBERON:0003056!9.06e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!3.74e-14!115;UBERON:0001049!1.91e-12!57;UBERON:0005068!1.91e-12!57;UBERON:0006241!1.91e-12!57;UBERON:0007135!1.91e-12!57;UBERON:0000073!5.97e-11!94;UBERON:0001016!5.97e-11!94;UBERON:0001017!1.01e-10!82;UBERON:0000955!1.12e-10!69;UBERON:0006238!1.12e-10!69;UBERON:0002780!1.57e-10!41;UBERON:0001890!1.57e-10!41;UBERON:0006240!1.57e-10!41;UBERON:0003080!1.93e-10!42;UBERON:0005743!4.26e-10!86;UBERON:0002020!5.59e-10!34;UBERON:0003528!5.59e-10!34;UBERON:0002616!1.38e-09!59;UBERON:0001869!4.12e-09!32;UBERON:0001893!5.55e-09!34;UBERON:0002791!5.61e-09!33;UBERON:0003075!7.46e-09!86;UBERON:0007284!7.46e-09!86;UBERON:0002619!8.12e-09!22;UBERON:0002346!8.84e-09!90;UBERON:0001950!8.76e-08!20;UBERON:0000956!4.62e-07!25;UBERON:0000203!4.62e-07!25;UBERON:0003056!9.06e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.47e-09;22!UBERON:0003528;3.42e-09;34!UBERON:0002020;3.42e-09;34!UBERON:0002791;3.61e-09;32!UBERON:0001869;3.86e-09;32!UBERON:0001950;2.10e-08;20!UBERON:0002780;2.17e-08;41!UBERON:0001890;2.17e-08;41!UBERON:0001893;2.56e-08;34!UBERON:0000956;8.00e-08;25!UBERON:0000203;8.00e-08;25!UBERON:0000073;6.85e-07;53!UBERON:0002616;6.85e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.36e-16,114;UBERON:0001049,8.69e-13,56;UBERON:0005068,8.69e-13,56;UBERON:0006241,8.69e-13,56;UBERON:0007135,8.69e-13,56;UBERON:0000073,6.38e-12,53;UBERON:0002616,6.38e-12,53;UBERON:0002780,1.83e-11,41;UBERON:0001890,1.83e-11,41;UBERON:0003080,1.83e-11,41;UBERON:0006240,1.83e-11,41;UBERON:0001016,2.39e-11,89;UBERON:0003528,7.28e-11,34;UBERON:0002020,7.28e-11,34;UBERON:0000955,1.26e-10,68;UBERON:0006238,1.26e-10,68;UBERON:0001017,1.39e-10,81;UBERON:0003075,5.74e-10,82;UBERON:0007284,5.74e-10,82;UBERON:0002791,5.76e-10,32;UBERON:0001869,6.51e-10,32;UBERON:0001893,9.07e-10,34;UBERON:0002619,1.66e-09,22;UBERON:0002346,1.75e-09,86;UBERON:0010371,2.20e-08,104;UBERON:0001950,2.24e-08,20;UBERON:0000956,1.14e-07,25;UBERON:0000203,1.14e-07,25;UBERON:0003056,2.50e-07,61 | |||
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| ||
|short_description=p1@ENST00000416718 | |short_description=p1@ENST00000416718 | ||
}} | }} |
Latest revision as of 09:19, 28 July 2015
Short description: | p1@ENST00000416718 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000416718_5end |
Coexpression cluster: | C180_skeletal_heart_Hepatocyte_acute_occipital_hippocampus_middle |
Association with transcript: | 145bp_to_ENST00000416718_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.36e-16 | 114 |
neural tube | 8.69e-13 | 56 |
neural rod | 8.69e-13 | 56 |
future spinal cord | 8.69e-13 | 56 |
neural keel | 8.69e-13 | 56 |
regional part of nervous system | 6.38e-12 | 53 |
regional part of brain | 6.38e-12 | 53 |
regional part of forebrain | 1.83e-11 | 41 |
forebrain | 1.83e-11 | 41 |
anterior neural tube | 1.83e-11 | 41 |
future forebrain | 1.83e-11 | 41 |
nervous system | 2.39e-11 | 89 |
brain grey matter | 7.28e-11 | 34 |
gray matter | 7.28e-11 | 34 |
brain | 1.26e-10 | 68 |
future brain | 1.26e-10 | 68 |
central nervous system | 1.39e-10 | 81 |
neural plate | 5.74e-10 | 82 |
presumptive neural plate | 5.74e-10 | 82 |
regional part of telencephalon | 5.76e-10 | 32 |
cerebral hemisphere | 6.51e-10 | 32 |
telencephalon | 9.07e-10 | 34 |
regional part of cerebral cortex | 1.66e-09 | 22 |
neurectoderm | 1.75e-09 | 86 |
ecto-epithelium | 2.20e-08 | 104 |
neocortex | 2.24e-08 | 20 |
cerebral cortex | 1.14e-07 | 25 |
pallium | 1.14e-07 | 25 |
pre-chordal neural plate | 2.50e-07 | 61 |