FFCP PHASE1:Hg19::chr2:88991347..88991367,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22934 | |EntrezGene=22934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10297 | |HGNC=10297 | ||
|TSSclassifier=strong | |||
|UniProt=P49247 | |UniProt=P49247 | ||
|association_with_transcript=143bp_to_BC015529_5end | |association_with_transcript=143bp_to_BC015529_5end | ||
|cluster_id=chr2:88991347..88991367,+ | |||
|description=CAGE_peak_2_at_RPIA_5end | |description=CAGE_peak_2_at_RPIA_5end | ||
|id=chr2:88991347..88991367,+ | |id=chr2:88991347..88991367,+ | ||
|ontology_enrichment_celltype=CL:0000037!7.18e-33!172;CL:0000566!7.18e-33!172;CL:0000988!1.12e-32!182;CL:0002032!1.35e-29!165;CL:0000837!1.35e-29!165;CL:0000542!2.08e-23!53;CL:0000051!2.08e-23!53;CL:0000838!6.33e-23!52;CL:0000738!4.43e-20!140;CL:0002031!1.38e-19!124;CL:0002087!4.35e-19!119;CL:0000084!1.34e-11!25;CL:0000827!1.34e-11!25;CL:0000945!6.34e-11!24;CL:0000826!6.34e-11!24;CL:0000763!5.03e-10!112;CL:0000049!5.03e-10!112;CL:0000791!4.45e-08!18;CL:0000789!4.45e-08!18;CL:0002420!4.45e-08!18;CL:0002419!4.45e-08!18;CL:0000790!4.45e-08!18;CL:0000134!6.89e-07!358;CL:0000236!9.44e-07!14 | |ontology_enrichment_celltype=CL:0000037!7.18e-33!172;CL:0000566!7.18e-33!172;CL:0000988!1.12e-32!182;CL:0002032!1.35e-29!165;CL:0000837!1.35e-29!165;CL:0000542!2.08e-23!53;CL:0000051!2.08e-23!53;CL:0000838!6.33e-23!52;CL:0000738!4.43e-20!140;CL:0002031!1.38e-19!124;CL:0002087!4.35e-19!119;CL:0000084!1.34e-11!25;CL:0000827!1.34e-11!25;CL:0000945!6.34e-11!24;CL:0000826!6.34e-11!24;CL:0000763!5.03e-10!112;CL:0000049!5.03e-10!112;CL:0000791!4.45e-08!18;CL:0000789!4.45e-08!18;CL:0002420!4.45e-08!18;CL:0002419!4.45e-08!18;CL:0000790!4.45e-08!18;CL:0000134!6.89e-07!358;CL:0000236!9.44e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.47e-16;53!CL:0000084;6.70e-14;25!CL:0000945;5.21e-12;24!CL:0000791;1.45e-09;18!CL:0000789;1.45e-09;18!CL:0002419;1.45e-09;18!CL:0002087;1.83e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.94e-37,168;CL:0000988,3.94e-35,177;CL:0002032,4.45e-33,161;CL:0000837,4.45e-33,161;CL:0000542,4.86e-27,53;CL:0000051,4.86e-27,53;CL:0000838,1.86e-26,52;CL:0000738,5.47e-22,136;CL:0002031,7.40e-21,120;CL:0002087,1.63e-20,115;CL:0000084,1.10e-13,25;CL:0000827,1.10e-13,25;CL:0000945,5.46e-12,24;CL:0000826,5.46e-12,24;CL:0000763,1.43e-10,108;CL:0000049,1.43e-10,108;CL:0000791,1.95e-09,18;CL:0000789,1.95e-09,18;CL:0002420,1.95e-09,18;CL:0002419,1.95e-09,18;CL:0000790,1.95e-09,18;CL:0000134,2.38e-09,354;CL:0002320,2.69e-08,361;CL:0000236,3.35e-07,14;CL:0000048,4.82e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000051;2.47e-16;53!CL:0000790;1.45e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!5.26e-19!51;DOID:0060083!5.26e-19!51;DOID:1240!1.47e-15!39;DOID:8692!8.78e-12!31;DOID:0060058!8.19e-07!10 | |ontology_enrichment_disease=DOID:2531!5.26e-19!51;DOID:0060083!5.26e-19!51;DOID:1240!1.47e-15!39;DOID:8692!8.78e-12!31;DOID:0060058!8.19e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:1240;4.63e-14;39!DOID:2531;6.22e-13;51!DOID:0060083;6.22e-13;51!DOID:8692;3.55e-12;31!DOID:0060058;4.25e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.96e-21,51;DOID:0060083,3.96e-21,51;DOID:1240,1.11e-17,39;DOID:8692,3.74e-13,31;DOID:0060058,6.53e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002193!6.11e-09!112;UBERON:0000178!7.08e-09!15;UBERON:0000179!7.08e-09!15;UBERON:0000463!7.08e-09!15;UBERON:0002390!1.47e-07!102;UBERON:0003061!1.47e-07!102 | |ontology_enrichment_uberon=UBERON:0002193!6.11e-09!112;UBERON:0000178!7.08e-09!15;UBERON:0000179!7.08e-09!15;UBERON:0000463!7.08e-09!15;UBERON:0002390!1.47e-07!102;UBERON:0003061!1.47e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.63e-10;15!UBERON:0000179;7.63e-10;15!UBERON:0000463;7.63e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.55e-10,15;UBERON:0000179,9.55e-10,15;UBERON:0000463,9.55e-10,15;UBERON:0002193,1.32e-09,108;UBERON:0002390,1.32e-07,98;UBERON:0003061,1.32e-07,98;UBERON:0002384,3.43e-07,371 | |||
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| ||
|short_description=p2@RPIA | |short_description=p2@RPIA | ||
}} | }} |
Latest revision as of 21:01, 18 September 2015
Short description: | p2@RPIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPIA_5end |
Coexpression cluster: | NA |
Association with transcript: | 143bp_to_BC015529_5end |
EntrezGene: | RPIA |
HGNC: | 10297 |
UniProt: | P49247 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.94e-37 | 168 |
hematopoietic cell | 3.94e-35 | 177 |
hematopoietic oligopotent progenitor cell | 4.45e-33 | 161 |
hematopoietic multipotent progenitor cell | 4.45e-33 | 161 |
lymphocyte | 4.86e-27 | 53 |
common lymphoid progenitor | 4.86e-27 | 53 |
lymphoid lineage restricted progenitor cell | 1.86e-26 | 52 |
leukocyte | 5.47e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 7.40e-21 | 120 |
nongranular leukocyte | 1.63e-20 | 115 |
T cell | 1.10e-13 | 25 |
pro-T cell | 1.10e-13 | 25 |
lymphocyte of B lineage | 5.46e-12 | 24 |
pro-B cell | 5.46e-12 | 24 |
myeloid cell | 1.43e-10 | 108 |
common myeloid progenitor | 1.43e-10 | 108 |
mature alpha-beta T cell | 1.95e-09 | 18 |
alpha-beta T cell | 1.95e-09 | 18 |
immature T cell | 1.95e-09 | 18 |
mature T cell | 1.95e-09 | 18 |
immature alpha-beta T cell | 1.95e-09 | 18 |
mesenchymal cell | 2.38e-09 | 354 |
connective tissue cell | 2.69e-08 | 361 |
B cell | 3.35e-07 | 14 |
multi fate stem cell | 4.82e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
blood | 9.55e-10 | 15 |
haemolymphatic fluid | 9.55e-10 | 15 |
organism substance | 9.55e-10 | 15 |
hemolymphoid system | 1.32e-09 | 108 |
hematopoietic system | 1.32e-07 | 98 |
blood island | 1.32e-07 | 98 |
connective tissue | 3.43e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.96e-21 | 51 |
immune system cancer | 3.96e-21 | 51 |
leukemia | 1.11e-17 | 39 |
myeloid leukemia | 3.74e-13 | 31 |
lymphoma | 6.53e-08 | 10 |