FFCP PHASE1:Hg19::chr3:14474193..14474209,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6533 | |EntrezGene=6533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11052 | |HGNC=11052 | ||
|TSSclassifier=strong | |||
|UniProt=C9JPV1 | |UniProt=C9JPV1 | ||
|association_with_transcript=15bp_to_ENST00000452775_5end | |association_with_transcript=15bp_to_ENST00000452775_5end | ||
|cluster_id=chr3:14474193..14474209,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_SLC6A6_5end | |description=CAGE_peak_6_at_SLC6A6_5end | ||
|id=chr3:14474193..14474209,+ | |id=chr3:14474193..14474209,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.14e-75!140;CL:0000766!6.70e-68!76;CL:0002031!8.83e-63!124;CL:0002087!2.07e-58!119;CL:0000037!1.62e-57!172;CL:0000566!1.62e-57!172;CL:0000557!1.32e-56!71;CL:0002032!6.29e-56!165;CL:0000837!6.29e-56!165;CL:0002057!3.19e-54!42;CL:0000839!3.28e-53!70;CL:0000988!7.36e-53!182;CL:0002009!1.41e-50!65;CL:0000860!1.18e-49!45;CL:0002194!3.04e-48!63;CL:0000576!3.04e-48!63;CL:0000040!3.04e-48!63;CL:0000559!3.04e-48!63;CL:0000763!2.35e-44!112;CL:0000049!2.35e-44!112;CL:0000134!2.01e-19!358;CL:0002320!1.56e-18!365;CL:0000219!1.41e-16!390;CL:0002393!3.40e-14!9;CL:0002397!3.40e-14!9;CL:0000094!3.43e-14!8;CL:0000048!2.66e-12!430;CL:0000723!8.86e-12!436;CL:0000034!1.08e-11!444;CL:0000945!1.62e-11!24;CL:0000826!1.62e-11!24;CL:0000838!8.25e-11!52;CL:0000542!1.76e-10!53;CL:0000051!1.76e-10!53;CL:0000081!9.14e-10!11;CL:0002274!1.09e-08!5;CL:0000457!1.09e-08!5;CL:0002191!1.09e-08!5;CL:0000097!1.09e-08!5;CL:0000831!1.09e-08!5;CL:0002028!1.09e-08!5;CL:0000840!5.70e-08!5;CL:0001029!5.70e-08!5 | |ontology_enrichment_celltype=CL:0000738!5.14e-75!140;CL:0000766!6.70e-68!76;CL:0002031!8.83e-63!124;CL:0002087!2.07e-58!119;CL:0000037!1.62e-57!172;CL:0000566!1.62e-57!172;CL:0000557!1.32e-56!71;CL:0002032!6.29e-56!165;CL:0000837!6.29e-56!165;CL:0002057!3.19e-54!42;CL:0000839!3.28e-53!70;CL:0000988!7.36e-53!182;CL:0002009!1.41e-50!65;CL:0000860!1.18e-49!45;CL:0002194!3.04e-48!63;CL:0000576!3.04e-48!63;CL:0000040!3.04e-48!63;CL:0000559!3.04e-48!63;CL:0000763!2.35e-44!112;CL:0000049!2.35e-44!112;CL:0000134!2.01e-19!358;CL:0002320!1.56e-18!365;CL:0000219!1.41e-16!390;CL:0002393!3.40e-14!9;CL:0002397!3.40e-14!9;CL:0000094!3.43e-14!8;CL:0000048!2.66e-12!430;CL:0000723!8.86e-12!436;CL:0000034!1.08e-11!444;CL:0000945!1.62e-11!24;CL:0000826!1.62e-11!24;CL:0000838!8.25e-11!52;CL:0000542!1.76e-10!53;CL:0000051!1.76e-10!53;CL:0000081!9.14e-10!11;CL:0002274!1.09e-08!5;CL:0000457!1.09e-08!5;CL:0002191!1.09e-08!5;CL:0000097!1.09e-08!5;CL:0000831!1.09e-08!5;CL:0002028!1.09e-08!5;CL:0000840!5.70e-08!5;CL:0001029!5.70e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.44e-67;33!CL:0002057;3.44e-67;33!CL:0000473;1.82e-52;39!CL:0000234;1.82e-52;39!CL:0000576;1.29e-43;48!CL:0000766;2.09e-41;69!CL:0000094;3.04e-22;8!CL:0000763;3.00e-19;100!CL:0000081;7.16e-16;11!CL:0002087;8.68e-16;104!CL:0002393;1.14e-14;6!CL:0002397;1.14e-14;6!CL:0000738;1.44e-13;136!CL:0000767;2.68e-12;3!CL:0000097;1.36e-11;5!CL:0000771;7.38e-09;2!CL:0000988;9.33e-09;177!CL:0000219;7.37e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.55e-92,72;CL:0000860,4.89e-83,42;CL:0002057,4.89e-83,42;CL:0000473,1.36e-80,48;CL:0000234,1.36e-80,48;CL:0000839,3.93e-70,66;CL:0000557,5.87e-69,67;CL:0000738,4.11e-66,136;CL:0002194,1.13e-62,59;CL:0000576,1.13e-62,59;CL:0000040,1.13e-62,59;CL:0000559,1.13e-62,59;CL:0002009,2.32e-60,61;CL:0000763,2.07e-58,108;CL:0000049,2.07e-58,108;CL:0000037,2.07e-51,168;CL:0002031,5.01e-50,120;CL:0002032,1.20e-49,161;CL:0000837,1.20e-49,161;CL:0000988,3.17e-48,177;CL:0002087,3.01e-47,115;CL:0000094,2.49e-22,8;CL:0000134,1.82e-20,354;CL:0002320,7.71e-20,361;CL:0000219,1.24e-17,386;CL:0000081,6.22e-16,11;CL:0000034,5.70e-15,441;CL:0000048,6.24e-15,427;CL:0000723,1.47e-14,433;CL:0002393,1.85e-13,9;CL:0002397,1.85e-13,9;CL:0000767,2.64e-12,3;CL:0000097,1.20e-11,5;CL:0002028,1.20e-11,5;CL:0000771,7.39e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.32e-62;42!CL:0000049;2.17e-16;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.48e-50!80;UBERON:0002390!1.85e-45!102;UBERON:0003061!1.85e-45!102;UBERON:0001474!2.59e-45!86;UBERON:0002193!4.21e-41!112;UBERON:0004765!6.57e-36!101;UBERON:0001434!6.57e-36!101;UBERON:0002405!3.36e-33!115;UBERON:0002384!5.18e-18!375;UBERON:0002204!8.48e-16!167;UBERON:0003081!2.68e-14!216 | |ontology_enrichment_uberon=UBERON:0002371!4.48e-50!80;UBERON:0002390!1.85e-45!102;UBERON:0003061!1.85e-45!102;UBERON:0001474!2.59e-45!86;UBERON:0002193!4.21e-41!112;UBERON:0004765!6.57e-36!101;UBERON:0001434!6.57e-36!101;UBERON:0002405!3.36e-33!115;UBERON:0002384!5.18e-18!375;UBERON:0002204!8.48e-16!167;UBERON:0003081!2.68e-14!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.28e-60,76;UBERON:0001474,9.80e-55,82;UBERON:0002390,3.04e-52,98;UBERON:0003061,3.04e-52,98;UBERON:0004765,4.56e-49,90;UBERON:0002405,3.43e-47,93;UBERON:0002193,1.63e-46,108;UBERON:0001434,3.02e-43,100;UBERON:0002204,3.72e-22,167;UBERON:0003081,3.93e-20,203;UBERON:0002384,5.52e-19,371;UBERON:0000926,1.63e-09,315;UBERON:0004120,1.63e-09,315;UBERON:0006603,1.63e-09,315 | |||
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|short_description=p6@SLC6A6 | |short_description=p6@SLC6A6 | ||
}} | }} |
Latest revision as of 05:52, 25 September 2015
Short description: | p6@SLC6A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC6A6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 15bp_to_ENST00000452775_5end |
EntrezGene: | SLC6A6 |
HGNC: | 11052 |
UniProt: | C9JPV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.28e-60 | 76 |
bone element | 9.80e-55 | 82 |
hematopoietic system | 3.04e-52 | 98 |
blood island | 3.04e-52 | 98 |
skeletal element | 4.56e-49 | 90 |
immune system | 3.43e-47 | 93 |
hemolymphoid system | 1.63e-46 | 108 |
skeletal system | 3.02e-43 | 100 |
musculoskeletal system | 3.72e-22 | 167 |
lateral plate mesoderm | 3.93e-20 | 203 |
connective tissue | 5.52e-19 | 371 |
mesoderm | 1.63e-09 | 315 |
mesoderm-derived structure | 1.63e-09 | 315 |
presumptive mesoderm | 1.63e-09 | 315 |