FFCP PHASE1:Hg19::chr10:125757011..125757036,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:125757011..125757036,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr10:125757011..125757036,- | |description=CAGE_peak_at_chr10:125757011..125757036,- | ||
|id=chr10:125757011..125757036,- | |id=chr10:125757011..125757036,- | ||
|ontology_enrichment_celltype=CL:0002057!4.68e-55!42;CL:0000860!9.03e-51!45;CL:0000766!2.84e-50!76;CL:0002194!7.89e-38!63;CL:0000576!7.89e-38!63;CL:0000040!7.89e-38!63;CL:0000559!7.89e-38!63;CL:0002009!2.15e-36!65;CL:0000738!1.13e-34!140;CL:0000839!3.69e-33!70;CL:0000557!1.44e-32!71;CL:0000763!1.50e-30!112;CL:0000049!1.50e-30!112;CL:0002087!2.57e-27!119;CL:0000037!7.93e-26!172;CL:0000566!7.93e-26!172;CL:0002393!3.00e-25!9;CL:0002397!3.00e-25!9;CL:0000988!1.05e-23!182;CL:0002032!3.83e-23!165;CL:0000837!3.83e-23!165;CL:0000094!7.11e-23!8;CL:0002031!4.03e-21!124;CL:0000081!3.52e-16!11;CL:0000134!1.35e-13!358;CL:0002320!4.70e-13!365;CL:0000219!3.76e-11!390;CL:0000048!1.11e-10!430;CL:0000723!2.51e-10!436;CL:0000775!6.22e-10!3;CL:0000034!7.18e-10!444;CL:0000842!1.97e-09!3;CL:0000875!2.40e-09!3;CL:0002396!2.40e-09!3;CL:0000767!3.33e-09!3;CL:0000771!3.77e-07!2;CL:0000224!3.80e-07!4;CL:0000063!6.47e-07!578 | |ontology_enrichment_celltype=CL:0002057!4.68e-55!42;CL:0000860!9.03e-51!45;CL:0000766!2.84e-50!76;CL:0002194!7.89e-38!63;CL:0000576!7.89e-38!63;CL:0000040!7.89e-38!63;CL:0000559!7.89e-38!63;CL:0002009!2.15e-36!65;CL:0000738!1.13e-34!140;CL:0000839!3.69e-33!70;CL:0000557!1.44e-32!71;CL:0000763!1.50e-30!112;CL:0000049!1.50e-30!112;CL:0002087!2.57e-27!119;CL:0000037!7.93e-26!172;CL:0000566!7.93e-26!172;CL:0002393!3.00e-25!9;CL:0002397!3.00e-25!9;CL:0000988!1.05e-23!182;CL:0002032!3.83e-23!165;CL:0000837!3.83e-23!165;CL:0000094!7.11e-23!8;CL:0002031!4.03e-21!124;CL:0000081!3.52e-16!11;CL:0000134!1.35e-13!358;CL:0002320!4.70e-13!365;CL:0000219!3.76e-11!390;CL:0000048!1.11e-10!430;CL:0000723!2.51e-10!436;CL:0000775!6.22e-10!3;CL:0000034!7.18e-10!444;CL:0000842!1.97e-09!3;CL:0000875!2.40e-09!3;CL:0002396!2.40e-09!3;CL:0000767!3.33e-09!3;CL:0000771!3.77e-07!2;CL:0000224!3.80e-07!4;CL:0000063!6.47e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000094;6.78e-43;8!CL:0002393;9.13e-42;6!CL:0002397;9.13e-42;6!CL:0000081;5.33e-31;11!CL:0000775;1.79e-22;3!CL:0000226;3.96e-21;3!CL:0000842;3.96e-21;3!CL:0000766;1.87e-20;69!CL:0000576;2.05e-18;48!CL:0000771;1.54e-15;2!CL:0000875;3.75e-10;3!CL:0002396;3.75e-10;3!CL:0000767;4.11e-10;3!CL:0000860;2.88e-09;33!CL:0002057;2.88e-09;33!CL:0000763;3.48e-09;100!CL:0002581;4.89e-08;1!CL:0000473;4.41e-07;39!CL:0000234;4.41e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,9.40e-49,9;CL:0002397,9.40e-49,9;CL:0000094,8.43e-43,8;CL:0000766,4.76e-42,72;CL:0000860,5.21e-34,42;CL:0002057,5.21e-34,42;CL:0000081,6.24e-31,11;CL:0000473,2.12e-29,48;CL:0000234,2.12e-29,48;CL:0000738,2.61e-27,136;CL:0000763,8.25e-27,108;CL:0000049,8.25e-27,108;CL:0002194,6.08e-23,59;CL:0000576,6.08e-23,59;CL:0000040,6.08e-23,59;CL:0000559,6.08e-23,59;CL:0000775,1.72e-22,3;CL:0002009,4.14e-22,61;CL:0000037,2.72e-21,168;CL:0000226,3.11e-21,3;CL:0000842,3.11e-21,3;CL:0000839,3.04e-20,66;CL:0000988,5.48e-20,177;CL:0000557,6.66e-20,67;CL:0002032,1.12e-16,161;CL:0000837,1.12e-16,161;CL:0002087,9.99e-16,115;CL:0000771,1.54e-15,2;CL:0000134,1.26e-10,354;CL:0002320,2.52e-10,361;CL:0000875,2.98e-10,3;CL:0002396,2.98e-10,3;CL:0000767,4.95e-10,3;CL:0002031,6.42e-10,120;CL:0000219,2.89e-09,386;CL:0002581,4.72e-08,1;CL:0000048,5.76e-08,427;CL:0000723,8.71e-08,433;CL:0000034,1.49e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.87e-22;42!CL:0000049;2.38e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.71e-32!102;UBERON:0003061!3.71e-32!102;UBERON:0002371!6.31e-30!80;UBERON:0002193!2.54e-28!112;UBERON:0001474!3.38e-27!86;UBERON:0004765!2.86e-23!101;UBERON:0001434!2.86e-23!101;UBERON:0002405!2.76e-19!115;UBERON:0002204!4.93e-13!167;UBERON:0003081!7.61e-13!216;UBERON:0002384!2.57e-12!375 | |ontology_enrichment_uberon=UBERON:0002390!3.71e-32!102;UBERON:0003061!3.71e-32!102;UBERON:0002371!6.31e-30!80;UBERON:0002193!2.54e-28!112;UBERON:0001474!3.38e-27!86;UBERON:0004765!2.86e-23!101;UBERON:0001434!2.86e-23!101;UBERON:0002405!2.76e-19!115;UBERON:0002204!4.93e-13!167;UBERON:0003081!7.61e-13!216;UBERON:0002384!2.57e-12!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.66e-07;15!UBERON:0000179;1.66e-07;15!UBERON:0000463;1.66e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.97e-21,98;UBERON:0003061,1.97e-21,98;UBERON:0002193,3.97e-19,108;UBERON:0002371,3.08e-17,76;UBERON:0001474,8.80e-16,82;UBERON:0004765,3.86e-14,90;UBERON:0002405,1.35e-13,93;UBERON:0001434,1.88e-12,100;UBERON:0002384,6.48e-10,371;UBERON:0003081,1.29e-09,203;UBERON:0000178,1.57e-07,15;UBERON:0000179,1.57e-07,15;UBERON:0000463,1.57e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,1.15148819429164,0.928896739896456,0,0,0,0,0,0,12.7418943962332,6.41742231904453,8.02940221648652,0,0,0.257575567634187,0.436194716338694,0,0.485168122375632,0.464858073811369,0,0,0.28769239232215,0,0.236482229888585,0.689491361473237,0.645484683583826,2.70852973188684,0.752969358170419,0,0.224723484445085,1.53041946185451,0.641858054152187,0,0,0,1.27867425159808,0.870627715885752,0,0,0.251248665256743,0.521482918420201,0.434377689410233,1.21079900526674,0.368277635987565,0,2.32380814943136,3.4016687994407,1.67726916406701,4.15615935242032,2.55300717830561,1.44653028027372,4.56020389985998,0.99458338599545,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1314542666882,7.75560528296651,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0.215627574859517,0.385029108839245,0,0,0,0,0,18.7251755986796,5.9832291840805,21.5496066986738,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,1.86091223510599,5.82428342210265,1.38745825144478,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,1.15148819429164,0.928896739896456,0,0,0,0,0,0,12.7418943962332,6.41742231904453,8.02940221648652,0,0,0.257575567634187,0.436194716338694,0,0.485168122375632,0.464858073811369,0,0,0.28769239232215,0,0.236482229888585,0.689491361473237,0.645484683583826,2.70852973188684,0.752969358170419,0,0.224723484445085,1.53041946185451,0.641858054152187,0,0,0,1.27867425159808,0.870627715885752,0,0,0.251248665256743,0.521482918420201,0.434377689410233,1.21079900526674,0.368277635987565,0,2.32380814943136,3.4016687994407,1.67726916406701,4.15615935242032,2.55300717830561,1.44653028027372,4.56020389985998,0.99458338599545,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1314542666882,7.75560528296651,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0.215627574859517,0.385029108839245,0,0,0,0,0,18.7251755986796,5.9832291840805,21.5496066986738,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,1.86091223510599,5.82428342210265,1.38745825144478,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:125757011..125757036,- | |short_description=p@chr10:125757011..125757036,- | ||
}} | }} |
Latest revision as of 11:18, 23 July 2015
Short description: | p@chr10:125757011..125757036, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:125757011..125757036, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.97e-21 | 98 |
blood island | 1.97e-21 | 98 |
hemolymphoid system | 3.97e-19 | 108 |
bone marrow | 3.08e-17 | 76 |
bone element | 8.80e-16 | 82 |
skeletal element | 3.86e-14 | 90 |
immune system | 1.35e-13 | 93 |
skeletal system | 1.88e-12 | 100 |
connective tissue | 6.48e-10 | 371 |
lateral plate mesoderm | 1.29e-09 | 203 |
blood | 1.57e-07 | 15 |
haemolymphatic fluid | 1.57e-07 | 15 |
organism substance | 1.57e-07 | 15 |