FFCP PHASE1:Hg19::chr10:45477877..45477901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83937 | |EntrezGene=83937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20793 | |HGNC=20793 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-67bp_to_uc001jbt.2_5end | |association_with_transcript=-67bp_to_uc001jbt.2_5end | ||
|cluster_id=chr10:45477877..45477901,+ | |||
|coexpression_cluster_id=C357 | |coexpression_cluster_id=C357 | ||
|description=CAGE_peak_2_at_RASSF4_5end | |description=CAGE_peak_2_at_RASSF4_5end | ||
|id=chr10:45477877..45477901,+ | |id=chr10:45477877..45477901,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.10e-28!24;CL:0000115!3.35e-26!35;CL:0000071!7.45e-24!18;CL:0002546!7.45e-24!18;CL:0002078!1.13e-18!44;CL:0000213!2.70e-15!57;CL:0000215!2.70e-15!57;CL:1000413!6.94e-13!9;CL:0002544!2.42e-09!6;CL:0002543!1.57e-08!6;CL:0000222!4.18e-07!119 | |ontology_enrichment_celltype=CL:0002139!2.10e-28!24;CL:0000115!3.35e-26!35;CL:0000071!7.45e-24!18;CL:0002546!7.45e-24!18;CL:0002078!1.13e-18!44;CL:0000213!2.70e-15!57;CL:0000215!2.70e-15!57;CL:1000413!6.94e-13!9;CL:0002544!2.42e-09!6;CL:0002543!1.57e-08!6;CL:0000222!4.18e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.11e-63;24!CL:0000071;3.62e-49;18!CL:0000115;1.52e-44;36!CL:1000413;9.05e-32;9!CL:0002078;1.14e-27;45!CL:0002544;2.67e-22;6!CL:0000213;2.42e-20;58!CL:0000215;2.42e-20;58!CL:0002138;3.86e-15;6!CL:0002144;1.24e-12;3!CL:0002543;7.70e-10;6!CL:0002545;1.73e-08;2!CL:0000076;9.72e-08;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.67e-63,24;CL:0000115,1.28e-52,36;CL:0000071,2.48e-49,18;CL:0002546,2.48e-49,18;CL:0002078,8.07e-41,45;CL:1000413,7.34e-32,9;CL:0000213,2.99e-30,58;CL:0000215,2.99e-30,58;CL:0002544,2.36e-22,6;CL:0005020,5.13e-15,6;CL:0002138,5.13e-15,6;CL:0005022,5.13e-15,6;CL:0002144,1.24e-12,3;CL:0000222,2.40e-11,121;CL:0000076,3.06e-11,63;CL:0002543,6.71e-10,6;CL:0002545,1.94e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002546;3.62e-49;18!CL:0005022;3.86e-15;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.78e-26!115;UBERON:0001986!7.45e-24!18;UBERON:0004638!7.45e-24!18;UBERON:0004852!7.45e-24!18;UBERON:0004111!1.73e-19!241;UBERON:0000025!4.32e-19!194;UBERON:0000487!2.85e-18!22;UBERON:0000477!3.53e-17!286;UBERON:0006914!2.75e-15!25;UBERON:0000055!1.32e-13!69;UBERON:0001049!6.39e-13!57;UBERON:0005068!6.39e-13!57;UBERON:0006241!6.39e-13!57;UBERON:0007135!6.39e-13!57;UBERON:0003915!6.94e-13!9;UBERON:0004700!6.94e-13!9;UBERON:0001917!6.94e-13!9;UBERON:0004872!2.33e-12!84;UBERON:0000483!1.64e-11!309;UBERON:0000119!3.65e-11!312;UBERON:0001981!3.70e-11!60;UBERON:0007500!3.70e-11!60;UBERON:0004537!3.70e-11!60;UBERON:0006965!3.70e-11!60;UBERON:0002049!1.60e-10!79;UBERON:0007798!1.60e-10!79;UBERON:0002616!2.34e-10!59;UBERON:0003914!7.80e-10!118;UBERON:0001009!8.57e-10!113;UBERON:0002298!8.18e-09!8;UBERON:0000955!8.82e-09!69;UBERON:0006238!8.82e-09!69;UBERON:0002020!1.22e-08!34;UBERON:0003528!1.22e-08!34;UBERON:0004535!1.40e-08!110;UBERON:0003075!5.52e-08!86;UBERON:0007284!5.52e-08!86;UBERON:0002308!6.29e-08!9;UBERON:0000125!6.29e-08!9;UBERON:0001017!7.23e-08!82;UBERON:0003080!9.90e-08!42;UBERON:0005743!1.23e-07!86;UBERON:0001893!1.86e-07!34;UBERON:0002346!3.12e-07!90;UBERON:0003076!3.86e-07!15;UBERON:0003057!3.86e-07!15;UBERON:0001869!4.13e-07!32;UBERON:0002780!4.56e-07!41;UBERON:0001890!4.56e-07!41;UBERON:0006240!4.56e-07!41;UBERON:0002791!5.29e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!3.78e-26!115;UBERON:0001986!7.45e-24!18;UBERON:0004638!7.45e-24!18;UBERON:0004852!7.45e-24!18;UBERON:0004111!1.73e-19!241;UBERON:0000025!4.32e-19!194;UBERON:0000487!2.85e-18!22;UBERON:0000477!3.53e-17!286;UBERON:0006914!2.75e-15!25;UBERON:0000055!1.32e-13!69;UBERON:0001049!6.39e-13!57;UBERON:0005068!6.39e-13!57;UBERON:0006241!6.39e-13!57;UBERON:0007135!6.39e-13!57;UBERON:0003915!6.94e-13!9;UBERON:0004700!6.94e-13!9;UBERON:0001917!6.94e-13!9;UBERON:0004872!2.33e-12!84;UBERON:0000483!1.64e-11!309;UBERON:0000119!3.65e-11!312;UBERON:0001981!3.70e-11!60;UBERON:0007500!3.70e-11!60;UBERON:0004537!3.70e-11!60;UBERON:0006965!3.70e-11!60;UBERON:0002049!1.60e-10!79;UBERON:0007798!1.60e-10!79;UBERON:0002616!2.34e-10!59;UBERON:0003914!7.80e-10!118;UBERON:0001009!8.57e-10!113;UBERON:0002298!8.18e-09!8;UBERON:0000955!8.82e-09!69;UBERON:0006238!8.82e-09!69;UBERON:0002020!1.22e-08!34;UBERON:0003528!1.22e-08!34;UBERON:0004535!1.40e-08!110;UBERON:0003075!5.52e-08!86;UBERON:0007284!5.52e-08!86;UBERON:0002308!6.29e-08!9;UBERON:0000125!6.29e-08!9;UBERON:0001017!7.23e-08!82;UBERON:0003080!9.90e-08!42;UBERON:0005743!1.23e-07!86;UBERON:0001893!1.86e-07!34;UBERON:0002346!3.12e-07!90;UBERON:0003076!3.86e-07!15;UBERON:0003057!3.86e-07!15;UBERON:0001869!4.13e-07!32;UBERON:0002780!4.56e-07!41;UBERON:0001890!4.56e-07!41;UBERON:0006240!4.56e-07!41;UBERON:0002791!5.29e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.62e-49;18!UBERON:0001986;3.62e-49;18!UBERON:0004852;3.62e-49;18!UBERON:0000487;1.77e-39;22!UBERON:0006914;3.02e-34;25!UBERON:0003915;9.05e-32;9!UBERON:0004700;9.05e-32;9!UBERON:0001917;9.05e-32;9!UBERON:0000490;4.28e-23;33!UBERON:0010523;1.24e-12;3!UBERON:0001915;1.24e-12;3!UBERON:0001982;1.24e-12;3!UBERON:0000055;4.14e-12;65!UBERON:0001473;2.82e-11;8!UBERON:0004536;2.82e-11;8!UBERON:0006558;2.82e-11;8!UBERON:0007500;6.27e-10;56!UBERON:0001981;6.27e-10;56!UBERON:0004537;6.27e-10;56!UBERON:0002465;5.94e-09;10!UBERON:0005800;1.73e-08;2!UBERON:0001515;1.73e-08;2!UBERON:0003914;7.98e-08;74!UBERON:0002049;9.93e-08;75!UBERON:0007798;9.93e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.48e-49,18;UBERON:0001986,2.48e-49,18;UBERON:0004852,2.48e-49,18;UBERON:0000487,1.31e-39,22;UBERON:0006914,2.31e-34,25;UBERON:0003915,7.34e-32,9;UBERON:0004700,7.34e-32,9;UBERON:0001917,7.34e-32,9;UBERON:0000055,8.22e-23,68;UBERON:0002049,3.98e-19,78;UBERON:0007798,3.98e-19,78;UBERON:0007500,7.12e-16,59;UBERON:0001981,7.12e-16,59;UBERON:0004537,7.12e-16,59;UBERON:0006965,7.12e-16,59;UBERON:0004111,1.54e-14,240;UBERON:0000025,2.62e-13,192;UBERON:0010523,1.24e-12,3;UBERON:0001915,1.24e-12,3;UBERON:0001982,1.24e-12,3;UBERON:0004535,4.73e-12,109;UBERON:0001009,1.41e-11,112;UBERON:0001473,3.48e-11,8;UBERON:0004536,3.48e-11,8;UBERON:0006558,3.48e-11,8;UBERON:0004872,5.07e-10,83;UBERON:0002465,7.00e-09,10;UBERON:0003914,1.55e-08,117;UBERON:0005800,1.94e-08,2;UBERON:0001515,1.94e-08,2;UBERON:0003528,2.31e-08,34;UBERON:0002020,2.31e-08,34;UBERON:0000483,6.64e-08,306;UBERON:0000119,9.56e-08,309;UBERON:0002791,3.32e-07,32;UBERON:0000073,6.52e-07,53;UBERON:0002616,6.52e-07,53 | |||
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|short_description=p2@RASSF4 | |short_description=p2@RASSF4 | ||
}} | }} |
Latest revision as of 07:09, 18 September 2015
Short description: | p2@RASSF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RASSF4_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | -67bp_to_uc001jbt.2_5end |
EntrezGene: | RASSF4 |
HGNC: | 20793 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.67e-63 | 24 |
endothelial cell | 1.28e-52 | 36 |
blood vessel endothelial cell | 2.48e-49 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.48e-49 | 18 |
meso-epithelial cell | 8.07e-41 | 45 |
endothelial cell of artery | 7.34e-32 | 9 |
lining cell | 2.99e-30 | 58 |
barrier cell | 2.99e-30 | 58 |
aortic endothelial cell | 2.36e-22 | 6 |
lymphangioblast | 5.13e-15 | 6 |
endothelial cell of lymphatic vessel | 5.13e-15 | 6 |
vascular lymphangioblast | 5.13e-15 | 6 |
capillary endothelial cell | 1.24e-12 | 3 |
mesodermal cell | 2.40e-11 | 121 |
squamous epithelial cell | 3.06e-11 | 63 |
vein endothelial cell | 6.71e-10 | 6 |
thoracic aorta endothelial cell | 1.94e-08 | 2 |