FFCP PHASE1:Hg19::chr12:53614946..53614975,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53614946..53614975,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_at_chr12:53614946..53614975,+ | |description=CAGE_peak_at_chr12:53614946..53614975,+ | ||
|id=chr12:53614946..53614975,+ | |id=chr12:53614946..53614975,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.08e-24!45;CL:0002057!3.67e-24!42;CL:0000738!5.74e-23!140;CL:0000766!7.39e-22!76;CL:0000557!1.07e-17!71;CL:0000988!1.05e-16!182;CL:0002031!4.70e-16!124;CL:0000839!4.71e-16!70;CL:0000037!9.47e-16!172;CL:0000566!9.47e-16!172;CL:0002009!1.04e-15!65;CL:0002087!9.50e-15!119;CL:0002194!1.01e-14!63;CL:0000576!1.01e-14!63;CL:0000040!1.01e-14!63;CL:0000559!1.01e-14!63;CL:0002032!1.30e-14!165;CL:0000837!1.30e-14!165;CL:0000763!3.81e-14!112;CL:0000049!3.81e-14!112;CL:0000003!7.56e-08!722 | |ontology_enrichment_celltype=CL:0000860!1.08e-24!45;CL:0002057!3.67e-24!42;CL:0000738!5.74e-23!140;CL:0000766!7.39e-22!76;CL:0000557!1.07e-17!71;CL:0000988!1.05e-16!182;CL:0002031!4.70e-16!124;CL:0000839!4.71e-16!70;CL:0000037!9.47e-16!172;CL:0000566!9.47e-16!172;CL:0002009!1.04e-15!65;CL:0002087!9.50e-15!119;CL:0002194!1.01e-14!63;CL:0000576!1.01e-14!63;CL:0000040!1.01e-14!63;CL:0000559!1.01e-14!63;CL:0002032!1.30e-14!165;CL:0000837!1.30e-14!165;CL:0000763!3.81e-14!112;CL:0000049!3.81e-14!112;CL:0000003!7.56e-08!722 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.42e-56;33!CL:0002057;3.42e-56;33!CL:0000473;3.45e-39;39!CL:0000234;3.45e-39;39!CL:0000576;1.76e-34;48!CL:0000766;2.39e-30;69!CL:0000094;1.28e-15;8!CL:0000081;2.77e-14;11!CL:0000763;3.09e-14;100!CL:0000738;4.77e-12;136!CL:0000097;1.41e-11;5!CL:0002087;2.60e-11;104!CL:0002393;2.63e-10;6!CL:0002397;2.63e-10;6!CL:0000775;8.86e-09;3!CL:0000988;4.07e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.42e-66,42;CL:0002057,8.42e-66,42;CL:0000766,2.54e-65,72;CL:0000473,3.18e-56,48;CL:0000234,3.18e-56,48;CL:0000557,9.96e-52,67;CL:0000839,7.59e-50,66;CL:0000738,5.82e-47,136;CL:0000763,3.78e-45,108;CL:0000049,3.78e-45,108;CL:0002009,8.84e-44,61;CL:0002194,7.73e-43,59;CL:0000576,7.73e-43,59;CL:0000040,7.73e-43,59;CL:0000559,7.73e-43,59;CL:0000988,5.19e-37,177;CL:0000037,1.60e-36,168;CL:0002032,5.76e-34,161;CL:0000837,5.76e-34,161;CL:0002031,8.77e-33,120;CL:0002087,3.01e-28,115;CL:0000134,3.20e-17,354;CL:0002320,1.48e-16,361;CL:0000094,1.33e-15,8;CL:0000219,6.22e-15,386;CL:0000081,2.77e-14,11;CL:0000034,8.86e-14,441;CL:0000048,2.21e-13,427;CL:0000723,5.91e-13,433;CL:0000097,1.28e-11,5;CL:0002028,1.28e-11,5;CL:0000775,8.25e-09,3;CL:0002393,7.47e-07,9;CL:0002397,7.47e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.88e-49;42!CL:0000049;1.14e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.11e-17!102;UBERON:0003061!2.11e-17!102;UBERON:0002371!5.97e-17!80;UBERON:0001474!1.20e-15!86;UBERON:0002193!2.11e-14!112;UBERON:0004765!3.11e-12!101;UBERON:0001434!3.11e-12!101;UBERON:0003081!7.95e-11!216;UBERON:0002405!2.58e-09!115;UBERON:0002204!3.37e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!2.11e-17!102;UBERON:0003061!2.11e-17!102;UBERON:0002371!5.97e-17!80;UBERON:0001474!1.20e-15!86;UBERON:0002193!2.11e-14!112;UBERON:0004765!3.11e-12!101;UBERON:0001434!3.11e-12!101;UBERON:0003081!7.95e-11!216;UBERON:0002405!2.58e-09!115;UBERON:0002204!3.37e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.43e-49,76;UBERON:0001474,1.81e-44,82;UBERON:0002390,1.40e-41,98;UBERON:0003061,1.40e-41,98;UBERON:0004765,1.86e-39,90;UBERON:0002405,8.44e-38,93;UBERON:0002193,1.49e-36,108;UBERON:0001434,2.56e-34,100;UBERON:0003081,6.91e-26,203;UBERON:0002204,6.17e-19,167;UBERON:0002384,1.19e-15,371;UBERON:0000926,3.85e-12,315;UBERON:0004120,3.85e-12,315;UBERON:0006603,3.85e-12,315 | |||
|phase1_expression=0,0.214100523890983,0.704772020479856,0,0.446961094427288,0,0,1.26343974685366,0,0.245733936501509,2.09340350391728,0,0,0.247532705920093,0,1.34465029290355,0.602694528023977,1.46062018077475,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.547497700291537,0.502170558379211,0.382067028739756,0.738905305049512,0.550975469195755,5.11373559903575,0.383829398097213,2.01260960310899,2.75826367343678,0.6024118375565,0.369754010166788,0.0774672005803016,0.284338464974843,0,3.87796785972314,3.40925560699241,4.55722828503289,0.447830948479849,0,0.257575567634187,1.45398238779565,1.88937971844405,2.18325655069035,4.64858073811369,5.75635043230556,8.05236564327269,4.31538588483226,2.0492856522328,6.3850202069918,4.48169384957604,3.22742341791913,8.12558919566051,3.38836211176688,5.18521685109907,8.09004544002305,4.28517449319264,1.60464513538047,5.75403413219137,1.31940520074686,0.398927315243264,0.426224750532694,4.35313857942876,2.8369261234557,9.34233373493363,4.52247597462138,2.08593167368081,6.08128765174327,1.21079900526674,4.05105399586321,4.43047342417238,0.422510572623884,1.91343869968539,2.30624510059213,1.57260083605093,0.750884464207532,1.76798145366788,0,0.19891667719909,0.365328307529268,0,0,0.889509253863555,0.853460445133014,1.60158394814405,0,1.32208974556972,0,0,0,1.52909291250092,1.32171328579026,1.68152568894461,0,0,0,0.411202997999018,0.334372990781356,0,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0.640456598628376,0.650296737799391,0.493313713811028,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0.226618685395132,0,0,0,0.318565414324097,0,0.950452044448374,0.903450714466637,0.383959833463255,0,0,0,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0.12786256184353,0,0,0,0,0,0,0.665188192387692,0.175669571386252,0.130979075497713,0,0,0,0,0.398873881556595,0.238490624305342,1.14398982156026,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.17859945656816,0,0.337834441449967,1.53316637465883,0,0.732806975721629,3.9534125230819,7.75560528296651,0.436094052142534,0,0,0.132409180813219,0.286836620748814,0,0,2.1349799145941,0.24666754841716,0,0.269421344139376,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0.323745888736263,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0.640672166455702,0.635795703478686,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.292311015483596,0,0.368199594569197,0.323292113637624,0.355009592516614,0.201504196455281,0,0,0.272746120590835,0.573609190778008,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.354920400119532,0,0.482022059766964,0.992645754591546,0.217879444092406,1.18635309555548,0.269662616320329,0,0.769494313892781,0,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0.245976877086227,0.171567810298526,0.109750285408626,0,0,0,0,1.03993478527958,0,0.115930404975077,0,0.433099343283221,0,0,3.1608175918371,0,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0.283550194484773,0,0,0,1.47798971368783,1.23267807618516,2.90259361757081,1.44119953416961,3.28230326908588,0.253991577168676,0.763976851116555,1.17217447210047,0,0.514137463516618,0.600686115687835,0.857479297891735,0,0,0,0.129271715757778,7.15312891703765,0,0.26593811658487,2.08014873822732,0.257207374262142,1.41849132023278,0.799266537048298,0,1.08524321078289,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.716243852959582,0.112085143993527,0.591092280605782,0.862510299438069,1.54011643535698,0.254094624222463,0,0,0.167516265334349,0,5.24304916763028,5.9832291840805,3.72973962092432,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0.391602314925481,0.686286847621712,0.82707210449155,4.74571241800957,2.56146138728266,0,1.66435439510497,0,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0.482561763430822,0,0,0,0.328508624055237,0.519254429183621,0.232420756919918,0,0,0.184161977871793,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,1.13733384070897,0,0,0,0,2.50844886927427,0.254876273045038,0,0.223874754722178,0,0,0,0.656029291399411,0.325378394664303,0.103041011647722,0.0915694648183434,0.082509499920588,0.574265537996172,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.322260734604821,0.580066775656914,0.340906509664404,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,0,0.6970372701606,0.924100740528266,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0.42793898803392,0,1.56989728039846,0.179872457583315,0.274537029736055,0,0.404364963146632,0,0,0.975267478179181,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0,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| ||
|short_description=p@chr12:53614946..53614975,+ | |short_description=p@chr12:53614946..53614975,+ | ||
}} | }} |
Latest revision as of 09:48, 24 July 2015
Short description: | p@chr12:53614946..53614975, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53614946..53614975, + |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.43e-49 | 76 |
bone element | 1.81e-44 | 82 |
hematopoietic system | 1.40e-41 | 98 |
blood island | 1.40e-41 | 98 |
skeletal element | 1.86e-39 | 90 |
immune system | 8.44e-38 | 93 |
hemolymphoid system | 1.49e-36 | 108 |
skeletal system | 2.56e-34 | 100 |
lateral plate mesoderm | 6.91e-26 | 203 |
musculoskeletal system | 6.17e-19 | 167 |
connective tissue | 1.19e-15 | 371 |
mesoderm | 3.85e-12 | 315 |
mesoderm-derived structure | 3.85e-12 | 315 |
presumptive mesoderm | 3.85e-12 | 315 |