FFCP PHASE1:Hg19::chr14:74953087..74953114,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:74953087..74953114,- | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_at_chr14:74953087..74953114,- | |description=CAGE_peak_at_chr14:74953087..74953114,- | ||
|id=chr14:74953087..74953114,- | |id=chr14:74953087..74953114,- | ||
|ontology_enrichment_celltype=CL:0002057!5.00e-22!42;CL:0002194!1.33e-21!63;CL:0000576!1.33e-21!63;CL:0000040!1.33e-21!63;CL:0000559!1.33e-21!63;CL:0000839!7.23e-21!70;CL:0002009!3.83e-20!65;CL:0000557!5.97e-20!71;CL:0000860!1.65e-19!45;CL:0000766!1.87e-19!76;CL:0000763!3.60e-07!112;CL:0000049!3.60e-07!112 | |ontology_enrichment_celltype=CL:0002057!5.00e-22!42;CL:0002194!1.33e-21!63;CL:0000576!1.33e-21!63;CL:0000040!1.33e-21!63;CL:0000559!1.33e-21!63;CL:0000839!7.23e-21!70;CL:0002009!3.83e-20!65;CL:0000557!5.97e-20!71;CL:0000860!1.65e-19!45;CL:0000766!1.87e-19!76;CL:0000763!3.60e-07!112;CL:0000049!3.60e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.60e-23;39!CL:0000234;8.60e-23;39!CL:0000860;2.90e-22;33!CL:0002057;2.90e-22;33!CL:0000576;1.19e-17;48!CL:0000766;5.18e-14;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.65e-33,48;CL:0000234,4.65e-33,48;CL:0002194,8.95e-33,59;CL:0000576,8.95e-33,59;CL:0000040,8.95e-33,59;CL:0000559,8.95e-33,59;CL:0000839,2.17e-31,66;CL:0002009,7.69e-31,61;CL:0000557,1.64e-30,67;CL:0000766,2.40e-30,72;CL:0000860,4.76e-28,42;CL:0002057,4.76e-28,42;CL:0000763,2.06e-14,108;CL:0000049,2.06e-14,108;CL:0002031,9.04e-09,120;CL:0002087,1.60e-08,115;CL:0000738,2.34e-08,136;CL:0000048,2.50e-08,427;CL:0002320,2.67e-08,361;CL:0000034,7.75e-08,441;CL:0000723,8.36e-08,433;CL:0000134,8.58e-08,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.92e-20;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.10e-17!80;UBERON:0001474!2.11e-15!86;UBERON:0000926!1.11e-14!448;UBERON:0004120!1.11e-14!448;UBERON:0006603!1.11e-14!448;UBERON:0002405!1.53e-14!115;UBERON:0004765!7.12e-14!101;UBERON:0001434!7.12e-14!101;UBERON:0002193!2.42e-13!112;UBERON:0002390!6.14e-13!102;UBERON:0003061!6.14e-13!102;UBERON:0003081!4.55e-12!216;UBERON:0002204!7.72e-10!167;UBERON:0000062!1.04e-09!511;UBERON:0000468!4.49e-09!659;UBERON:0000922!9.16e-08!612;UBERON:0000467!1.90e-07!625;UBERON:0000480!1.92e-07!626;UBERON:0000923!5.90e-07!604;UBERON:0005291!5.90e-07!604;UBERON:0006598!5.90e-07!604;UBERON:0002532!5.90e-07!604;UBERON:0002050!6.77e-07!605;UBERON:0005423!6.77e-07!605 | |ontology_enrichment_uberon=UBERON:0002371!3.10e-17!80;UBERON:0001474!2.11e-15!86;UBERON:0000926!1.11e-14!448;UBERON:0004120!1.11e-14!448;UBERON:0006603!1.11e-14!448;UBERON:0002405!1.53e-14!115;UBERON:0004765!7.12e-14!101;UBERON:0001434!7.12e-14!101;UBERON:0002193!2.42e-13!112;UBERON:0002390!6.14e-13!102;UBERON:0003061!6.14e-13!102;UBERON:0003081!4.55e-12!216;UBERON:0002204!7.72e-10!167;UBERON:0000062!1.04e-09!511;UBERON:0000468!4.49e-09!659;UBERON:0000922!9.16e-08!612;UBERON:0000467!1.90e-07!625;UBERON:0000480!1.92e-07!626;UBERON:0000923!5.90e-07!604;UBERON:0005291!5.90e-07!604;UBERON:0006598!5.90e-07!604;UBERON:0002532!5.90e-07!604;UBERON:0002050!6.77e-07!605;UBERON:0005423!6.77e-07!605 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.81e-27,76;UBERON:0001474,2.19e-24,82;UBERON:0004765,9.94e-24,90;UBERON:0002405,1.76e-23,93;UBERON:0000926,6.69e-22,315;UBERON:0004120,6.69e-22,315;UBERON:0006603,6.69e-22,315;UBERON:0001434,5.15e-21,100;UBERON:0002193,5.42e-20,108;UBERON:0002390,1.08e-19,98;UBERON:0003061,1.08e-19,98;UBERON:0003081,1.98e-17,203;UBERON:0002204,1.08e-14,167;UBERON:0002384,1.13e-07,371;UBERON:0002050,9.39e-07,564 | |||
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| ||
|short_description=p@chr14:74953087..74953114,- | |short_description=p@chr14:74953087..74953114,- | ||
}} | }} |
Latest revision as of 22:41, 24 July 2015
Short description: | p@chr14:74953087..74953114, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:74953087..74953114, - |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.65e-33 | 48 |
phagocyte | 4.65e-33 | 48 |
monopoietic cell | 8.95e-33 | 59 |
monocyte | 8.95e-33 | 59 |
monoblast | 8.95e-33 | 59 |
promonocyte | 8.95e-33 | 59 |
myeloid lineage restricted progenitor cell | 2.17e-31 | 66 |
macrophage dendritic cell progenitor | 7.69e-31 | 61 |
granulocyte monocyte progenitor cell | 1.64e-30 | 67 |
myeloid leukocyte | 2.40e-30 | 72 |
classical monocyte | 4.76e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.76e-28 | 42 |
myeloid cell | 2.06e-14 | 108 |
common myeloid progenitor | 2.06e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 9.04e-09 | 120 |
nongranular leukocyte | 1.60e-08 | 115 |
leukocyte | 2.34e-08 | 136 |
multi fate stem cell | 2.50e-08 | 427 |
connective tissue cell | 2.67e-08 | 361 |
stem cell | 7.75e-08 | 441 |
somatic stem cell | 8.36e-08 | 433 |
mesenchymal cell | 8.58e-08 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.81e-27 | 76 |
bone element | 2.19e-24 | 82 |
skeletal element | 9.94e-24 | 90 |
immune system | 1.76e-23 | 93 |
mesoderm | 6.69e-22 | 315 |
mesoderm-derived structure | 6.69e-22 | 315 |
presumptive mesoderm | 6.69e-22 | 315 |
skeletal system | 5.15e-21 | 100 |
hemolymphoid system | 5.42e-20 | 108 |
hematopoietic system | 1.08e-19 | 98 |
blood island | 1.08e-19 | 98 |
lateral plate mesoderm | 1.98e-17 | 203 |
musculoskeletal system | 1.08e-14 | 167 |
connective tissue | 1.13e-07 | 371 |
embryonic structure | 9.39e-07 | 564 |