FFCP PHASE1:Hg19::chr15:80448014..80448018,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:80448014..80448018,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr15:80448014..80448018,- | |description=CAGE_peak_at_chr15:80448014..80448018,- | ||
|id=chr15:80448014..80448018,- | |id=chr15:80448014..80448018,- | ||
|ontology_enrichment_celltype=CL:0000860!3.66e-52!45;CL:0000839!2.22e-50!70;CL:0000766!6.60e-50!76;CL:0000557!1.84e-49!71;CL:0002057!6.79e-49!42;CL:0002009!4.09e-43!65;CL:0002194!8.53e-43!63;CL:0000576!8.53e-43!63;CL:0000040!8.53e-43!63;CL:0000559!8.53e-43!63;CL:0000763!1.26e-40!112;CL:0000049!1.26e-40!112;CL:0000738!5.03e-25!140;CL:0000037!4.60e-23!172;CL:0000566!4.60e-23!172;CL:0002031!6.99e-23!124;CL:0002032!7.55e-22!165;CL:0000837!7.55e-22!165;CL:0000988!8.51e-22!182;CL:0002087!2.53e-19!119;CL:0000134!8.11e-15!358;CL:0002320!4.22e-14!365;CL:0000219!3.16e-13!390;CL:0000048!3.63e-10!430;CL:0000723!1.00e-09!436;CL:0002274!2.29e-09!5;CL:0000457!2.29e-09!5;CL:0002191!2.29e-09!5;CL:0000097!2.29e-09!5;CL:0000831!2.29e-09!5;CL:0002028!2.29e-09!5;CL:0000034!3.71e-09!444;CL:0000063!3.98e-08!578 | |ontology_enrichment_celltype=CL:0000860!3.66e-52!45;CL:0000839!2.22e-50!70;CL:0000766!6.60e-50!76;CL:0000557!1.84e-49!71;CL:0002057!6.79e-49!42;CL:0002009!4.09e-43!65;CL:0002194!8.53e-43!63;CL:0000576!8.53e-43!63;CL:0000040!8.53e-43!63;CL:0000559!8.53e-43!63;CL:0000763!1.26e-40!112;CL:0000049!1.26e-40!112;CL:0000738!5.03e-25!140;CL:0000037!4.60e-23!172;CL:0000566!4.60e-23!172;CL:0002031!6.99e-23!124;CL:0002032!7.55e-22!165;CL:0000837!7.55e-22!165;CL:0000988!8.51e-22!182;CL:0002087!2.53e-19!119;CL:0000134!8.11e-15!358;CL:0002320!4.22e-14!365;CL:0000219!3.16e-13!390;CL:0000048!3.63e-10!430;CL:0000723!1.00e-09!436;CL:0002274!2.29e-09!5;CL:0000457!2.29e-09!5;CL:0002191!2.29e-09!5;CL:0000097!2.29e-09!5;CL:0000831!2.29e-09!5;CL:0002028!2.29e-09!5;CL:0000034!3.71e-09!444;CL:0000063!3.98e-08!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-104;33!CL:0002057;1.08e-104;33!CL:0000473;3.48e-72;39!CL:0000234;3.48e-72;39!CL:0000576;3.07e-51;48!CL:0000766;2.39e-36;69!CL:0000763;3.18e-20;100!CL:0000097;5.73e-14;5!CL:0002087;2.82e-12;104!CL:0000738;9.61e-10;136!CL:0000163;8.53e-08;9 | |||
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|ontology_enrichment_development_v019=CL:0002057;7.65e-70;42!CL:0000049;2.86e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.63e-63,76;UBERON:0001474,8.68e-58,82;UBERON:0002405,3.70e-53,93;UBERON:0004765,5.16e-52,90;UBERON:0002390,4.55e-50,98;UBERON:0003061,4.55e-50,98;UBERON:0001434,4.42e-46,100;UBERON:0002193,9.73e-45,108;UBERON:0002204,1.53e-24,167;UBERON:0003081,1.56e-21,203;UBERON:0002384,5.78e-14,371;UBERON:0000926,5.33e-11,315;UBERON:0004120,5.33e-11,315;UBERON:0006603,5.33e-11,315 | |||
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|short_description=p@chr15:80448014..80448018,- | |short_description=p@chr15:80448014..80448018,- | ||
}} | }} |
Latest revision as of 04:45, 25 July 2015
Short description: | p@chr15:80448014..80448018, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:80448014..80448018, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.29e-95 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.29e-95 | 42 |
defensive cell | 3.74e-82 | 48 |
phagocyte | 3.74e-82 | 48 |
myeloid leukocyte | 5.19e-75 | 72 |
myeloid lineage restricted progenitor cell | 1.82e-73 | 66 |
granulocyte monocyte progenitor cell | 2.85e-72 | 67 |
monopoietic cell | 2.89e-64 | 59 |
monocyte | 2.89e-64 | 59 |
monoblast | 2.89e-64 | 59 |
promonocyte | 2.89e-64 | 59 |
macrophage dendritic cell progenitor | 5.88e-62 | 61 |
myeloid cell | 2.86e-53 | 108 |
common myeloid progenitor | 2.86e-53 | 108 |
hematopoietic lineage restricted progenitor cell | 3.72e-37 | 120 |
leukocyte | 3.61e-36 | 136 |
hematopoietic oligopotent progenitor cell | 4.19e-33 | 161 |
hematopoietic multipotent progenitor cell | 4.19e-33 | 161 |
hematopoietic stem cell | 2.20e-31 | 168 |
nongranular leukocyte | 1.03e-29 | 115 |
hematopoietic cell | 2.26e-29 | 177 |
mesenchymal cell | 4.58e-15 | 354 |
connective tissue cell | 1.34e-14 | 361 |
mast cell | 5.36e-14 | 5 |
basophil mast progenitor cell | 5.36e-14 | 5 |
motile cell | 5.85e-13 | 386 |
multi fate stem cell | 5.96e-11 | 427 |
somatic stem cell | 1.13e-10 | 433 |
stem cell | 2.58e-10 | 441 |
endocrine cell | 8.22e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.63e-63 | 76 |
bone element | 8.68e-58 | 82 |
immune system | 3.70e-53 | 93 |
skeletal element | 5.16e-52 | 90 |
hematopoietic system | 4.55e-50 | 98 |
blood island | 4.55e-50 | 98 |
skeletal system | 4.42e-46 | 100 |
hemolymphoid system | 9.73e-45 | 108 |
musculoskeletal system | 1.53e-24 | 167 |
lateral plate mesoderm | 1.56e-21 | 203 |
connective tissue | 5.78e-14 | 371 |
mesoderm | 5.33e-11 | 315 |
mesoderm-derived structure | 5.33e-11 | 315 |
presumptive mesoderm | 5.33e-11 | 315 |