FFCP PHASE1:Hg19::chr1:151964954..151964962,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:151964954..151964962,- | |||
|coexpression_cluster_id=C1734 | |coexpression_cluster_id=C1734 | ||
|description=CAGE_peak_at_chr1:151964954..151964962,- | |description=CAGE_peak_at_chr1:151964954..151964962,- | ||
|id=chr1:151964954..151964962,- | |id=chr1:151964954..151964962,- | ||
|ontology_enrichment_celltype=CL:0002057!3.99e-71!42;CL:0000860!1.11e-65!45;CL:0002009!3.91e-50!65;CL:0000766!3.59e-49!76;CL:0000557!1.47e-47!71;CL:0002194!8.08e-46!63;CL:0000576!8.08e-46!63;CL:0000040!8.08e-46!63;CL:0000559!8.08e-46!63;CL:0000839!1.15e-42!70;CL:0000763!1.30e-33!112;CL:0000049!1.30e-33!112;CL:0000738!5.67e-26!140;CL:0002031!4.20e-24!124;CL:0002087!5.63e-21!119;CL:0002032!3.02e-20!165;CL:0000837!3.02e-20!165;CL:0000037!6.02e-19!172;CL:0000566!6.02e-19!172;CL:0000988!2.88e-17!182;CL:0000767!1.41e-09!3;CL:0000144!1.40e-08!625;CL:0002320!2.24e-08!365;CL:0002371!3.06e-08!591;CL:0000134!3.20e-08!358;CL:0000219!6.65e-08!390;CL:0000063!9.18e-08!578;CL:0002393!1.92e-07!9;CL:0002397!1.92e-07!9;CL:0001014!5.48e-07!2;CL:0001016!5.48e-07!2;CL:0000012!6.21e-07!682 | |ontology_enrichment_celltype=CL:0002057!3.99e-71!42;CL:0000860!1.11e-65!45;CL:0002009!3.91e-50!65;CL:0000766!3.59e-49!76;CL:0000557!1.47e-47!71;CL:0002194!8.08e-46!63;CL:0000576!8.08e-46!63;CL:0000040!8.08e-46!63;CL:0000559!8.08e-46!63;CL:0000839!1.15e-42!70;CL:0000763!1.30e-33!112;CL:0000049!1.30e-33!112;CL:0000738!5.67e-26!140;CL:0002031!4.20e-24!124;CL:0002087!5.63e-21!119;CL:0002032!3.02e-20!165;CL:0000837!3.02e-20!165;CL:0000037!6.02e-19!172;CL:0000566!6.02e-19!172;CL:0000988!2.88e-17!182;CL:0000767!1.41e-09!3;CL:0000144!1.40e-08!625;CL:0002320!2.24e-08!365;CL:0002371!3.06e-08!591;CL:0000134!3.20e-08!358;CL:0000219!6.65e-08!390;CL:0000063!9.18e-08!578;CL:0002393!1.92e-07!9;CL:0002397!1.92e-07!9;CL:0001014!5.48e-07!2;CL:0001016!5.48e-07!2;CL:0000012!6.21e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.07e-53;33!CL:0002057;4.07e-53;33!CL:0000473;7.06e-38;39!CL:0000234;7.06e-38;39!CL:0000576;5.30e-35;48!CL:0000766;4.35e-27;69!CL:0000767;4.56e-25;3!CL:0001014;1.91e-17;2!CL:0001016;1.91e-17;2!CL:0000094;2.40e-16;8!CL:0000763;2.70e-13;100!CL:0002393;7.65e-13;6!CL:0002397;7.65e-13;6!CL:0002087;1.74e-12;104!CL:0000081;6.06e-12;11!CL:0000453;1.66e-07;5!CL:0000738;4.04e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.30e-65,42;CL:0002057,5.30e-65,42;CL:0000473,1.73e-56,48;CL:0000234,1.73e-56,48;CL:0000766,4.13e-54,72;CL:0002009,2.95e-53,61;CL:0000557,2.91e-48,67;CL:0002194,1.46e-44,59;CL:0000576,1.46e-44,59;CL:0000040,1.46e-44,59;CL:0000559,1.46e-44,59;CL:0000763,3.59e-42,108;CL:0000049,3.59e-42,108;CL:0000839,1.43e-39,66;CL:0000738,8.11e-33,136;CL:0002032,3.44e-27,161;CL:0000837,3.44e-27,161;CL:0000037,6.55e-26,168;CL:0002031,1.29e-25,120;CL:0000767,3.57e-25,3;CL:0000988,2.06e-24,177;CL:0002087,1.76e-21,115;CL:0001014,1.49e-17,2;CL:0001016,1.49e-17,2;CL:0000094,2.22e-16,8;CL:0000081,5.73e-12,11;CL:0000134,2.56e-10,354;CL:0002320,4.84e-10,361;CL:0000219,4.58e-09,386;CL:0002393,9.81e-09,9;CL:0002397,9.81e-09,9;CL:0000048,7.22e-08,427;CL:0000723,1.06e-07,433;CL:0000453,1.50e-07,5;CL:0000034,1.73e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.72e-48;42!CL:0000049;2.40e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.21e-41!80;UBERON:0001474!2.01e-39!86;UBERON:0004765!6.10e-32!101;UBERON:0001434!6.10e-32!101;UBERON:0002390!7.49e-30!102;UBERON:0003061!7.49e-30!102;UBERON:0002405!1.99e-28!115;UBERON:0002193!3.12e-26!112;UBERON:0002204!4.29e-16!167;UBERON:0003081!5.28e-15!216;UBERON:0002384!8.16e-08!375 | |ontology_enrichment_uberon=UBERON:0002371!5.21e-41!80;UBERON:0001474!2.01e-39!86;UBERON:0004765!6.10e-32!101;UBERON:0001434!6.10e-32!101;UBERON:0002390!7.49e-30!102;UBERON:0003061!7.49e-30!102;UBERON:0002405!1.99e-28!115;UBERON:0002193!3.12e-26!112;UBERON:0002204!4.29e-16!167;UBERON:0003081!5.28e-15!216;UBERON:0002384!8.16e-08!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.16e-42,76;UBERON:0001474,6.28e-39,82;UBERON:0004765,3.32e-35,90;UBERON:0002405,5.67e-34,93;UBERON:0002390,4.40e-32,98;UBERON:0003061,4.40e-32,98;UBERON:0001434,2.22e-31,100;UBERON:0002193,8.03e-29,108;UBERON:0002204,1.85e-17,167;UBERON:0003081,9.70e-14,203;UBERON:0002384,1.15e-09,371;UBERON:0000926,1.48e-07,315;UBERON:0004120,1.48e-07,315;UBERON:0006603,1.48e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,5.50709987588466,1.91914699048606,5.57338043937874,0,0.6024118375565,0.739508020333575,0,0,0,4.43196326825502,2.20598892217156,4.99125002646459,0,0,0,0.726991193897824,0,0.970336244751265,0.929716147622738,0.822335776043652,1.23882548358041,2.01384674625505,0.768482119587302,1.89185783910868,4.13694816883942,1.93645405075148,1.35426486594342,1.12945403725563,0.272906150057846,0.898893937780338,8.26426509401437,2.56743221660875,4.47535988059329,0.329851300186716,0.398927315243264,0.426224750532694,4.06292934080018,0,0.622822248995575,0.75374599577023,1.5644487552606,2.38907729175628,1.21079900526674,2.20966581592539,3.48108626184973,0.211255286311942,0,0.419317291016752,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92466059016951,8.51182150013745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,5.50709987588466,1.91914699048606,5.57338043937874,0,0.6024118375565,0.739508020333575,0,0,0,4.43196326825502,2.20598892217156,4.99125002646459,0,0,0,0.726991193897824,0,0.970336244751265,0.929716147622738,0.822335776043652,1.23882548358041,2.01384674625505,0.768482119587302,1.89185783910868,4.13694816883942,1.93645405075148,1.35426486594342,1.12945403725563,0.272906150057846,0.898893937780338,8.26426509401437,2.56743221660875,4.47535988059329,0.329851300186716,0.398927315243264,0.426224750532694,4.06292934080018,0,0.622822248995575,0.75374599577023,1.5644487552606,2.38907729175628,1.21079900526674,2.20966581592539,3.48108626184973,0.211255286311942,0,0.419317291016752,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92466059016951,8.51182150013745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:151964954..151964962,- | |short_description=p@chr1:151964954..151964962,- | ||
}} | }} |
Latest revision as of 21:30, 27 July 2015
Short description: | p@chr1:151964954..151964962, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:151964954..151964962, - |
Coexpression cluster: | C1734_immature_Basophils_CD14_Mast_Natural_CD34_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.16e-42 | 76 |
bone element | 6.28e-39 | 82 |
skeletal element | 3.32e-35 | 90 |
immune system | 5.67e-34 | 93 |
hematopoietic system | 4.40e-32 | 98 |
blood island | 4.40e-32 | 98 |
skeletal system | 2.22e-31 | 100 |
hemolymphoid system | 8.03e-29 | 108 |
musculoskeletal system | 1.85e-17 | 167 |
lateral plate mesoderm | 9.70e-14 | 203 |
connective tissue | 1.15e-09 | 371 |
mesoderm | 1.48e-07 | 315 |
mesoderm-derived structure | 1.48e-07 | 315 |
presumptive mesoderm | 1.48e-07 | 315 |