FFCP PHASE1:Hg19::chr1:155180322..155180351,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4580 | |EntrezGene=4580 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7504 | |HGNC=7504 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-287bp_to_ENST00000495589_5end | |association_with_transcript=-287bp_to_ENST00000495589_5end | ||
|cluster_id=chr1:155180322..155180351,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_MTX1_5end | |description=CAGE_peak_4_at_MTX1_5end | ||
|id=chr1:155180322..155180351,+ | |id=chr1:155180322..155180351,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.27e-48!42;CL:0000860!1.25e-45!45;CL:0000766!1.76e-45!76;CL:0002194!9.74e-41!63;CL:0000576!9.74e-41!63;CL:0000040!9.74e-41!63;CL:0000559!9.74e-41!63;CL:0002009!6.81e-39!65;CL:0000839!9.41e-35!70;CL:0000557!5.37e-34!71;CL:0000763!2.86e-30!112;CL:0000049!2.86e-30!112;CL:0000738!4.96e-25!140;CL:0002087!3.86e-22!119;CL:0000037!1.81e-20!172;CL:0000566!1.81e-20!172;CL:0002032!8.28e-19!165;CL:0000837!8.28e-19!165;CL:0000988!5.03e-18!182;CL:0002031!1.60e-17!124;CL:0000094!3.99e-11!8;CL:0002393!2.61e-10!9;CL:0002397!2.61e-10!9;CL:0000081!1.91e-07!11;CL:0000134!4.65e-07!358;CL:0002320!8.76e-07!365 | |ontology_enrichment_celltype=CL:0002057!3.27e-48!42;CL:0000860!1.25e-45!45;CL:0000766!1.76e-45!76;CL:0002194!9.74e-41!63;CL:0000576!9.74e-41!63;CL:0000040!9.74e-41!63;CL:0000559!9.74e-41!63;CL:0002009!6.81e-39!65;CL:0000839!9.41e-35!70;CL:0000557!5.37e-34!71;CL:0000763!2.86e-30!112;CL:0000049!2.86e-30!112;CL:0000738!4.96e-25!140;CL:0002087!3.86e-22!119;CL:0000037!1.81e-20!172;CL:0000566!1.81e-20!172;CL:0002032!8.28e-19!165;CL:0000837!8.28e-19!165;CL:0000988!5.03e-18!182;CL:0002031!1.60e-17!124;CL:0000094!3.99e-11!8;CL:0002393!2.61e-10!9;CL:0002397!2.61e-10!9;CL:0000081!1.91e-07!11;CL:0000134!4.65e-07!358;CL:0002320!8.76e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.41e-87;33!CL:0002057;2.41e-87;33!CL:0000473;5.85e-70;39!CL:0000234;5.85e-70;39!CL:0000576;8.45e-56;48!CL:0000766;1.75e-41;69!CL:0000094;3.83e-27;8!CL:0000763;3.63e-20;100!CL:0000081;2.41e-19;11!CL:0000738;4.04e-14;136!CL:0002087;1.14e-12;104!CL:0002393;1.17e-12;6!CL:0002397;1.17e-12;6!CL:0000775;6.16e-12;3!CL:0000767;4.08e-10;3!CL:0000771;1.34e-08;2!CL:0000988;1.78e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.09e-99,42;CL:0002057,1.09e-99,42;CL:0000473,6.89e-96,48;CL:0000234,6.89e-96,48;CL:0000766,3.91e-95,72;CL:0002194,8.76e-79,59;CL:0000576,8.76e-79,59;CL:0000040,8.76e-79,59;CL:0000559,8.76e-79,59;CL:0002009,6.42e-76,61;CL:0000839,1.67e-69,66;CL:0000557,2.46e-68,67;CL:0000763,5.26e-60,108;CL:0000049,5.26e-60,108;CL:0000738,3.97e-52,136;CL:0002087,2.60e-42,115;CL:0002032,2.57e-40,161;CL:0000837,2.57e-40,161;CL:0000037,4.62e-40,168;CL:0002031,5.74e-38,120;CL:0000988,1.89e-37,177;CL:0000094,4.11e-27,8;CL:0000081,2.53e-19,11;CL:0000134,7.73e-14,354;CL:0002320,2.41e-13,361;CL:0000775,6.16e-12,3;CL:0000219,1.32e-11,386;CL:0000767,4.29e-10,3;CL:0000048,1.72e-09,427;CL:0000723,3.37e-09,433;CL:0000034,8.01e-09,441;CL:0000771,1.36e-08,2;CL:0002393,2.28e-08,9;CL:0002397,2.28e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.89e-72;42!CL:0000049;1.34e-17;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.94e-40!102;UBERON:0003061!8.94e-40!102;UBERON:0002193!7.81e-38!112;UBERON:0002371!7.50e-31!80;UBERON:0001474!2.31e-27!86;UBERON:0002405!3.05e-23!115;UBERON:0004765!1.51e-20!101;UBERON:0001434!1.51e-20!101;UBERON:0003081!3.42e-17!216;UBERON:0000178!1.20e-09!15;UBERON:0000179!1.20e-09!15;UBERON:0000463!1.20e-09!15;UBERON:0002204!3.11e-09!167;UBERON:0000926!1.77e-07!448;UBERON:0004120!1.77e-07!448;UBERON:0006603!1.77e-07!448 | |ontology_enrichment_uberon=UBERON:0002390!8.94e-40!102;UBERON:0003061!8.94e-40!102;UBERON:0002193!7.81e-38!112;UBERON:0002371!7.50e-31!80;UBERON:0001474!2.31e-27!86;UBERON:0002405!3.05e-23!115;UBERON:0004765!1.51e-20!101;UBERON:0001434!1.51e-20!101;UBERON:0003081!3.42e-17!216;UBERON:0000178!1.20e-09!15;UBERON:0000179!1.20e-09!15;UBERON:0000463!1.20e-09!15;UBERON:0002204!3.11e-09!167;UBERON:0000926!1.77e-07!448;UBERON:0004120!1.77e-07!448;UBERON:0006603!1.77e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.08e-18;15!UBERON:0000179;4.08e-18;15!UBERON:0000463;4.08e-18;15!UBERON:0002390;7.12e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.92e-77,98;UBERON:0003061,1.92e-77,98;UBERON:0002193,2.81e-69,108;UBERON:0002371,1.87e-62,76;UBERON:0001474,3.34e-57,82;UBERON:0002405,5.80e-52,93;UBERON:0004765,2.81e-51,90;UBERON:0001434,3.41e-45,100;UBERON:0003081,1.32e-31,203;UBERON:0002204,3.78e-23,167;UBERON:0000178,4.13e-18,15;UBERON:0000179,4.13e-18,15;UBERON:0000463,4.13e-18,15;UBERON:0000926,2.82e-16,315;UBERON:0004120,2.82e-16,315;UBERON:0006603,2.82e-16,315;UBERON:0002384,1.14e-12,371 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,1.18009283054671,2.30297638858328,2.94150634300544,0,0,0,0,0,0,1.10799081706375,0.802177789880567,1.51907609501096,0,0,0,9.16008904311258,9.44689859222024,8.24785808038575,6.27558399645349,3.70051099219643,4.33588919253145,3.16461631554365,1.0246428261164,3.31075121844019,6.20542225325913,2.5819387343353,4.06279459783025,6.21199720490596,5.18521685109907,4.71919317334678,5.81559395504715,4.17207735198922,3.19668562899521,4.61791820261403,4.9865914405408,3.40979800426155,1.7412554317715,0.56738522469114,1.24564449799115,3.26623264833766,1.5644487552606,3.69221035998698,5.44859552370032,4.05105399586321,3.48108626184973,1.05627643155971,1.27562579979026,1.25795187305026,5.16711703273877,4.35512989240368,2.89306056054744,0.285012743741249,0.59675003159727,0.730656615058536,0,1.09227722252426,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,1.21890816109487,0.797747763113191,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,32.9451043590158,23.2668158488995,0.436094052142534,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,1.63802985597466,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,2.83698264046557,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,32.956309053676,26.9245313283622,15.3333739971333,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,3.23571301227925,0.533637789017222,0,0,0,0,0.153461973288062,0.561320188866147,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7755615415903,19.8805673857018,15.3804740537024,9.76750279376935,19.3340268350511,22.0480925805524,16.7409745543816,17.4487538784739,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0.0967563312890851,0,0,0.193978032976839,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.268733889946905,0,0,0.0787831823072236,0,0,0,0,0,0,0.321506296930038,0,0.415440338029185,0,0,0,0,0.157611414598396,0.262272940674991,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.427149650270779,0.471612915298998,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0.40341013740704,0,0,0.163771917510097,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0.118920090777569,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.939839179798536,1.16024198352439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.31037357147929,0,0.12729431655633,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,1.18009283054671,2.30297638858328,2.94150634300544,0,0,0,0,0,0,1.10799081706375,0.802177789880567,1.51907609501096,0,0,0,9.16008904311258,9.44689859222024,8.24785808038575,6.27558399645349,3.70051099219643,4.33588919253145,3.16461631554365,1.0246428261164,3.31075121844019,6.20542225325913,2.5819387343353,4.06279459783025,6.21199720490596,5.18521685109907,4.71919317334678,5.81559395504715,4.17207735198922,3.19668562899521,4.61791820261403,4.9865914405408,3.40979800426155,1.7412554317715,0.56738522469114,1.24564449799115,3.26623264833766,1.5644487552606,3.69221035998698,5.44859552370032,4.05105399586321,3.48108626184973,1.05627643155971,1.27562579979026,1.25795187305026,5.16711703273877,4.35512989240368,2.89306056054744,0.285012743741249,0.59675003159727,0.730656615058536,0,1.09227722252426,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,1.21890816109487,0.797747763113191,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,32.9451043590158,23.2668158488995,0.436094052142534,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,1.63802985597466,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,2.83698264046557,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,32.956309053676,26.9245313283622,15.3333739971333,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,3.23571301227925,0.533637789017222,0,0,0,0,0.153461973288062,0.561320188866147,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7755615415903,19.8805673857018,15.3804740537024,9.76750279376935,19.3340268350511,22.0480925805524,16.7409745543816,17.4487538784739,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.183195186803725,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0.0967563312890851,0,0,0.193978032976839,0,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.268733889946905,0,0,0.0787831823072236,0,0,0,0,0,0,0.321506296930038,0,0.415440338029185,0,0,0,0,0.157611414598396,0.262272940674991,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.427149650270779,0.471612915298998,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0.256241518587947,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0.40341013740704,0,0,0.163771917510097,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0.118920090777569,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.939839179798536,1.16024198352439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0.31037357147929,0,0.12729431655633,0,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p4@MTX1 | |short_description=p4@MTX1 | ||
}} | }} |
Latest revision as of 11:53, 17 September 2015
Short description: | p4@MTX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MTX1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -287bp_to_ENST00000495589_5end |
EntrezGene: | MTX1 |
HGNC: | 7504 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.92e-77 | 98 |
blood island | 1.92e-77 | 98 |
hemolymphoid system | 2.81e-69 | 108 |
bone marrow | 1.87e-62 | 76 |
bone element | 3.34e-57 | 82 |
immune system | 5.80e-52 | 93 |
skeletal element | 2.81e-51 | 90 |
skeletal system | 3.41e-45 | 100 |
lateral plate mesoderm | 1.32e-31 | 203 |
musculoskeletal system | 3.78e-23 | 167 |
blood | 4.13e-18 | 15 |
haemolymphatic fluid | 4.13e-18 | 15 |
organism substance | 4.13e-18 | 15 |
mesoderm | 2.82e-16 | 315 |
mesoderm-derived structure | 2.82e-16 | 315 |
presumptive mesoderm | 2.82e-16 | 315 |
connective tissue | 1.14e-12 | 371 |