FFCP PHASE1:Hg19::chr19:11670032..11670064,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:11670032..11670064,-
|short_description=p1@ELOF1
|description=CAGE_peak_1_at_ELOF1_5end
|association_with_transcript=0bp_to_ENST00000252445,NM_032377,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84337 | |EntrezGene=84337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28691 | |HGNC=28691 | ||
|TSSclassifier=strong | |||
|UniProt=P60002 | |UniProt=P60002 | ||
|association_with_transcript=0bp_to_ENST00000252445,NM_032377,uc002mse.1_5end | |||
|cluster_id=chr19:11670032..11670064,- | |||
|description=CAGE_peak_1_at_ELOF1_5end | |||
|id=chr19:11670032..11670064,- | |||
|ontology_enrichment_celltype=CL:0000003!1.01e-19!722;CL:0000548!1.08e-19!679;CL:0000004!1.08e-19!679;CL:0000255!1.08e-19!679;CL:0000144!1.39e-19!625;CL:0000012!2.32e-19!682;CL:0002371!9.97e-19!591;CL:0000183!3.30e-14!59;CL:0000393!1.07e-13!60;CL:0000211!1.07e-13!60;CL:0000192!3.71e-13!42;CL:0000514!3.71e-13!42;CL:0000187!2.04e-12!54;CL:0000680!5.26e-12!57;CL:0000056!5.26e-12!57;CL:0000355!5.26e-12!57;CL:0000055!6.94e-12!180;CL:0000359!3.69e-11!32;CL:0000034!8.92e-11!444;CL:0000723!2.74e-10!436;CL:0000048!7.97e-10!430;CL:0002321!1.20e-09!248;CL:0000220!2.32e-09!246;CL:0000222!4.04e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.78e-10;32!CL:0000192;5.58e-10;43!CL:0000393;1.61e-07;61!CL:0000211;1.61e-07;61!CL:0000187;3.14e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.54e-14,61;CL:0000211,3.54e-14,61;CL:0000192,1.15e-13,43;CL:0000514,1.15e-13,43;CL:0000187,6.86e-13,55;CL:0000680,1.81e-12,58;CL:0000056,1.81e-12,58;CL:0000355,1.81e-12,58;CL:0000359,3.69e-11,32;CL:0000034,1.28e-10,441;CL:0000723,3.88e-10,433;CL:0002321,6.64e-10,250;CL:0000048,1.11e-09,427;CL:0000222,2.22e-08,121 | |||
|ontology_enrichment_development_v019=CL:0000514;5.58e-10;43!CL:0000355;3.36e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!3.76e-11!70;UBERON:0000486!1.19e-10!82;UBERON:0000914!1.33e-10!83;UBERON:0002329!1.33e-10!83;UBERON:0003077!1.33e-10!83;UBERON:0003059!1.33e-10!83;UBERON:0007282!1.33e-10!83;UBERON:0009618!1.33e-10!83;UBERON:0007285!1.33e-10!83;UBERON:0005256!5.52e-10!143;UBERON:0001134!1.12e-09!61;UBERON:0002036!1.12e-09!61;UBERON:0003082!1.12e-09!61;UBERON:0002385!9.50e-09!63;UBERON:0001015!9.50e-09!63;UBERON:0000383!9.50e-09!63;UBERON:0001637!4.36e-08!42;UBERON:0003509!4.36e-08!42;UBERON:0004572!4.36e-08!42;UBERON:0000926!2.17e-07!448;UBERON:0004120!2.17e-07!448;UBERON:0006603!2.17e-07!448;UBERON:0003081!2.25e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.09e-12,78;UBERON:0002329,1.41e-11,71;UBERON:0003059,1.41e-11,71;UBERON:0007282,1.41e-11,71;UBERON:0004290,1.41e-11,71;UBERON:0009618,1.41e-11,71;UBERON:0007524,1.85e-11,73;UBERON:0003077,2.64e-11,72;UBERON:0007285,2.64e-11,72;UBERON:0000486,4.73e-11,83;UBERON:0001134,4.28e-10,62;UBERON:0002036,4.28e-10,62;UBERON:0003082,4.28e-10,62;UBERON:0000926,1.11e-09,315;UBERON:0004120,1.11e-09,315;UBERON:0006603,1.11e-09,315;UBERON:0002385,3.79e-09,64;UBERON:0001015,3.79e-09,64;UBERON:0000383,3.79e-09,64;UBERON:0005256,1.17e-08,122;UBERON:0001637,4.36e-08,42;UBERON:0003509,4.36e-08,42;UBERON:0004572,4.36e-08,42;UBERON:0003104,4.46e-08,160;UBERON:0009142,4.46e-08,160;UBERON:0000490,4.21e-07,148;UBERON:0002204,7.38e-07,167 | |||
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| ||
|short_description=p1@ELOF1 | |||
}} | }} |
Latest revision as of 05:57, 25 September 2015
Short description: | p1@ELOF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ELOF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000252445, NM_032377, uc002mse.1_5end |
EntrezGene: | ELOF1 |
HGNC: | 28691 |
UniProt: | P60002 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.54e-14 | 61 |
electrically active cell | 3.54e-14 | 61 |
smooth muscle cell | 1.15e-13 | 43 |
smooth muscle myoblast | 1.15e-13 | 43 |
muscle cell | 6.86e-13 | 55 |
muscle precursor cell | 1.81e-12 | 58 |
myoblast | 1.81e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.81e-12 | 58 |
vascular associated smooth muscle cell | 3.69e-11 | 32 |
stem cell | 1.28e-10 | 441 |
somatic stem cell | 3.88e-10 | 433 |
embryonic cell | 6.64e-10 | 250 |
multi fate stem cell | 1.11e-09 | 427 |
mesodermal cell | 2.22e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.09e-12 | 78 |
somite | 1.41e-11 | 71 |
presomitic mesoderm | 1.41e-11 | 71 |
presumptive segmental plate | 1.41e-11 | 71 |
dermomyotome | 1.41e-11 | 71 |
trunk paraxial mesoderm | 1.41e-11 | 71 |
dense mesenchyme tissue | 1.85e-11 | 73 |
paraxial mesoderm | 2.64e-11 | 72 |
presumptive paraxial mesoderm | 2.64e-11 | 72 |
multilaminar epithelium | 4.73e-11 | 83 |
skeletal muscle tissue | 4.28e-10 | 62 |
striated muscle tissue | 4.28e-10 | 62 |
myotome | 4.28e-10 | 62 |
mesoderm | 1.11e-09 | 315 |
mesoderm-derived structure | 1.11e-09 | 315 |
presumptive mesoderm | 1.11e-09 | 315 |
muscle tissue | 3.79e-09 | 64 |
musculature | 3.79e-09 | 64 |
musculature of body | 3.79e-09 | 64 |
trunk mesenchyme | 1.17e-08 | 122 |
artery | 4.36e-08 | 42 |
arterial blood vessel | 4.36e-08 | 42 |
arterial system | 4.36e-08 | 42 |
mesenchyme | 4.46e-08 | 160 |
entire embryonic mesenchyme | 4.46e-08 | 160 |
unilaminar epithelium | 4.21e-07 | 148 |
musculoskeletal system | 7.38e-07 | 167 |