FFCP PHASE1:Hg19::chr19:13953577..13953599,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:13953577..13953599,-
|short_description=p@chr19:13953577..13953599,-
|description=CAGE_peak_at_chr19:13953577..13953599,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:13953577..13953599,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr19:13953577..13953599,- | |||
|id=chr19:13953577..13953599,- | |||
|ontology_enrichment_celltype=CL:0000766!1.08e-08!76;CL:0000839!1.43e-08!70;CL:0000557!1.93e-08!71;CL:0000860!5.22e-08!45;CL:0002057!1.42e-07!42;CL:0002371!6.76e-07!591;CL:0002009!7.44e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.20e-23;5!CL:0000163;2.00e-13;9!CL:0000771;1.75e-07;2!CL:0000094;3.45e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.20e-23,5;CL:0002028,1.20e-23,5;CL:0000163,2.00e-13,9;CL:0000766,3.11e-10,72;CL:0000771,1.54e-07,2;CL:0000094,3.24e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.10e-13;1!UBERON:0003852;1.10e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.02e-08!167;UBERON:0002371!1.30e-07!80;UBERON:0004765!3.96e-07!101;UBERON:0001434!3.96e-07!101;UBERON:0001474!4.15e-07!86;UBERON:0002390!5.53e-07!102;UBERON:0003061!5.53e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;1.10e-13;1!UBERON:0008193;1.10e-13;1!UBERON:0010912;1.10e-13;1!UBERON:0002514;1.10e-13;1!UBERON:0003457;1.10e-13;1!UBERON:0008907;1.10e-13;1!UBERON:0008001;1.10e-13;1!UBERON:0007213;1.10e-13;1!UBERON:0009891;1.10e-13;1!UBERON:0007914;1.10e-13;1!UBERON:0007375;1.10e-13;1!UBERON:0003323;1.10e-13;1!UBERON:0010258;1.10e-13;1!UBERON:0005253;1.10e-13;1!UBERON:0007842;1.10e-13;1!UBERON:0002397;1.10e-13;1!UBERON:0003113;1.10e-13;1!UBERON:0003277;1.10e-13;1!UBERON:0001709;1.10e-13;1!UBERON:0002244;1.10e-13;1!UBERON:0005620;1.10e-13;1!UBERON:0010364;1.10e-13;1!UBERON:0004288;1.10e-13;1!UBERON:0004089;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,2.07e-13,1;UBERON:0008193,2.07e-13,1;UBERON:0010912,2.07e-13,1;UBERON:0002514,2.07e-13,1;UBERON:0003457,2.07e-13,1;UBERON:0008907,2.07e-13,1;UBERON:0008001,2.07e-13,1;UBERON:0007213,2.07e-13,1;UBERON:0009891,2.07e-13,1;UBERON:0007914,2.07e-13,1;UBERON:0009292,2.07e-13,1;UBERON:0003099,2.07e-13,1;UBERON:0007375,2.07e-13,1;UBERON:0003323,2.07e-13,1;UBERON:0010258,2.07e-13,1;UBERON:0007842,2.07e-13,1;UBERON:0009494,2.07e-13,1;UBERON:0010042,2.07e-13,1;UBERON:0010045,2.07e-13,1;UBERON:0010259,2.07e-13,1;UBERON:0010359,2.07e-13,1;UBERON:0009526,2.07e-13,1;UBERON:0002397,2.07e-13,1;UBERON:0003113,2.07e-13,1;UBERON:0003277,2.07e-13,1;UBERON:0001709,2.07e-13,1;UBERON:0004066,2.07e-13,1;UBERON:0002244,2.07e-13,1;UBERON:0005620,2.07e-13,1;UBERON:0004362,2.07e-13,1;UBERON:0010364,2.07e-13,1;UBERON:0010046,2.07e-13,1;UBERON:0005868,2.07e-13,1;UBERON:0007238,2.07e-13,1;UBERON:0004288,2.07e-13,1;UBERON:0004068,2.07e-13,1;UBERON:0010334,2.07e-13,1;UBERON:0003852,2.07e-13,1;UBERON:0010253,2.07e-13,1;UBERON:0005253,2.40e-07,2;UBERON:0004089,2.40e-07,2;UBERON:0001474,8.29e-07,82 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,1.10926203050036,0,0,0,0,0.601633342410425,1.73608696572681,0,0,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0.822335776043652,0,1.1507695692886,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,1.27867425159808,0,0.199463657621632,0.852449501065388,0.580418477257168,0.56738522469114,0,0.502497330513487,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0.300353785683013,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.473554504088034,0,0,0.534880391567015,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0.364295288292542,0,0,0,0.132957960518865,0,0,0.371457501329565,0.198762407366705,0.860234595106124,0.347140501607594,0,0.838998872419812,0,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.226864366320042,0.538168907066586,0,0,0,0.206105058476878,0.257640540045629,0,0.168776332241266,0,0,0,0,0.355009592516614,0.201504196455281,0.67824236924195,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0.297262324577456,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,10.9883901236609,7.35011762426503,20.4512742150735,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,5.9832291840805,0,0,0,0,0,0,0.315404830067869,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.431428401637234,0.213455115606889,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0,0,0,0,0,0.114814448164607,0,0,0,0,0.784349769176855,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0.6970372701606,0.308033580176089,0,0,0,0.286249773483982,0.744316738719335,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0.975267478179181,0,0,0,0,0,1.10273068709225,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.422215270595328,0.329294892959902,0.379473173765715,0,0.0962221127255121,2.01090682660736,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.0730893170861856,0,0,0,0,0,0,0,0.391102765469606,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0.856396000634902,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0,0.280272163313789,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0.202117188958219,0.653150243690884,0,0,0,0.332660356546013,0,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,1.10926203050036,0,0,0,0,0.601633342410425,1.73608696572681,0,0,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0.822335776043652,0,1.1507695692886,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,1.27867425159808,0,0.199463657621632,0.852449501065388,0.580418477257168,0.56738522469114,0,0.502497330513487,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0.300353785683013,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.473554504088034,0,0,0.534880391567015,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0.364295288292542,0,0,0,0.132957960518865,0,0,0.371457501329565,0.198762407366705,0.860234595106124,0.347140501607594,0,0.838998872419812,0,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.226864366320042,0.538168907066586,0,0,0,0.206105058476878,0.257640540045629,0,0.168776332241266,0,0,0,0,0.355009592516614,0.201504196455281,0.67824236924195,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0.297262324577456,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,10.9883901236609,7.35011762426503,20.4512742150735,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,5.9832291840805,0,0,0,0,0,0,0.315404830067869,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.431428401637234,0.213455115606889,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0,0,0,0,0,0.114814448164607,0,0,0,0,0.784349769176855,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0.6970372701606,0.308033580176089,0,0,0,0.286249773483982,0.744316738719335,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0.975267478179181,0,0,0,0,0,1.10273068709225,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.422215270595328,0.329294892959902,0.379473173765715,0,0.0962221127255121,2.01090682660736,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.19351266257817,0.0730893170861856,0,0,0,0,0,0,0,0.391102765469606,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0.856396000634902,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0,0,0,0.280272163313789,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0.202117188958219,0.653150243690884,0,0,0,0.332660356546013,0,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr19:13953577..13953599,- | |||
}} | }} |
Latest revision as of 04:11, 26 July 2015
Short description: | p@chr19:13953577..13953599, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13953577..13953599, - |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.20e-23 | 5 |
basophil mast progenitor cell | 1.20e-23 | 5 |
endocrine cell | 2.00e-13 | 9 |
myeloid leukocyte | 3.11e-10 | 72 |
eosinophil | 1.54e-07 | 2 |
granulocyte | 3.24e-07 | 8 |