FFCP PHASE1:Hg19::chr21:9831128..9831148,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:9831128..9831148,+ | |||
|coexpression_cluster_id=C1074 | |coexpression_cluster_id=C1074 | ||
|description=CAGE_peak_at_chr21:9831128..9831148,+ | |description=CAGE_peak_at_chr21:9831128..9831148,+ | ||
|id=chr21:9831128..9831148,+ | |id=chr21:9831128..9831148,+ | ||
|ontology_enrichment_celltype=CL:0000039!9.76e-14!7;CL:0000586!9.76e-14!7;CL:0000047!9.27e-09!8 | |ontology_enrichment_celltype=CL:0000039!9.76e-14!7;CL:0000586!9.76e-14!7;CL:0000047!9.27e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;3.74e-12;6!CL:0000404;3.74e-12;6!CL:0000039;1.94e-10;7!CL:0000586;1.94e-10;7!CL:0000047;1.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.88e-19,8;CL:0000540,3.85e-12,6;CL:0000031,3.85e-12,6;CL:0000404,3.85e-12,6;CL:0000039,2.04e-10,7;CL:0000586,2.04e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.22e-17;1!UBERON:0009117;1.83e-15;10!UBERON:0005564;1.83e-15;10!CL:0000031;3.74e-12;6!UBERON:0003056;9.64e-07;3 | |||
|ontology_enrichment_disease=DOID:3095!2.56e-12!22;DOID:2994!2.56e-12!22;DOID:14566!2.66e-11!239;DOID:162!4.83e-11!235;DOID:0050687!4.48e-10!143;DOID:1036!6.03e-09!8 | |ontology_enrichment_disease=DOID:3095!2.56e-12!22;DOID:2994!2.56e-12!22;DOID:14566!2.66e-11!239;DOID:162!4.83e-11!235;DOID:0050687!4.48e-10!143;DOID:1036!6.03e-09!8 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.17e-09;2!DOID:1036;2.77e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.12e-09,2;DOID:1036,2.77e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0003978!1.06e-08!3;UBERON:0009751!1.06e-08!3;UBERON:0000946!1.06e-08!3;UBERON:0002523!1.06e-08!3;UBERON:0005983!1.06e-08!3;UBERON:0002165!1.06e-08!3;UBERON:0002062!1.06e-08!3;UBERON:0007280!1.06e-08!3;UBERON:0003714!7.47e-07!2 | |ontology_enrichment_uberon=UBERON:0003978!1.06e-08!3;UBERON:0009751!1.06e-08!3;UBERON:0000946!1.06e-08!3;UBERON:0002523!1.06e-08!3;UBERON:0005983!1.06e-08!3;UBERON:0002165!1.06e-08!3;UBERON:0002062!1.06e-08!3;UBERON:0007280!1.06e-08!3;UBERON:0003714!7.47e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.73e-19;8!UBERON:0000941;1.22e-17;1!UBERON:0001785;1.22e-17;1!UBERON:0002464;1.22e-17;1!UBERON:0004904;1.22e-17;1!UBERON:0001021;1.22e-17;1!UBERON:0003135;4.04e-14;11!UBERON:0003714;1.71e-09;2!UBERON:0005162;1.71e-09;2!UBERON:0000122;1.71e-09;2!UBERON:0000991;1.12e-07;21!UBERON:0003101;2.36e-07;22!UBERON:0000079;2.36e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.49e-19,8;UBERON:0000941,1.03e-17,1;UBERON:0001785,1.03e-17,1;UBERON:0002464,1.03e-17,1;UBERON:0004904,1.03e-17,1;UBERON:0001021,1.03e-17,1;UBERON:0003902,1.03e-17,1;UBERON:0005425,1.03e-17,1;UBERON:0003135,4.62e-14,11;UBERON:0003714,1.57e-09,2;UBERON:0005162,1.57e-09,2;UBERON:0000122,1.57e-09,2;UBERON:0000991,1.20e-07,21;UBERON:0009196,1.20e-07,21;UBERON:0009117,1.20e-07,21;UBERON:0005564,1.20e-07,21;UBERON:0004176,2.52e-07,22;UBERON:0003101,2.52e-07,22;UBERON:0000079,2.52e-07,22 | |||
|phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,2.60279707715243,2.31986643833309,0,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78657797492418,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.399158742865633,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.538545866458633,0.217294743844016,0,0,0,0,0,0,1.1279783030859,0.588187602953219,0.335643173951685,8.15941050713996,0,0.632994193584081,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0,0,0,0.799238438328521,0,0.229073192331831,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0.630265458457789,0.906574442192831,0.337017719270924,0.590564889088493,0,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0.656740165994712,0.511164065356265,0,0,0,0.129282956361551,0,0.855434189421647,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56918800190471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,2.21875575573872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.594600453887843,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0,1.1218771271618,0,0.275684698604535,3.0084904715085,0,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,2.60279707715243,2.31986643833309,0,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78657797492418,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.399158742865633,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.538545866458633,0.217294743844016,0,0,0,0,0,0,1.1279783030859,0.588187602953219,0.335643173951685,8.15941050713996,0,0.632994193584081,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0,0,0,0.799238438328521,0,0.229073192331831,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0.630265458457789,0.906574442192831,0.337017719270924,0.590564889088493,0,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0.656740165994712,0.511164065356265,0,0,0,0.129282956361551,0,0.855434189421647,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56918800190471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,2.21875575573872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.594600453887843,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0,1.1218771271618,0,0.275684698604535,3.0084904715085,0,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr21:9831128..9831148,+ | |short_description=p@chr21:9831128..9831148,+ | ||
}} | }} |
Latest revision as of 18:54, 28 July 2015
Short description: | p@chr21:9831128..9831148, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:9831128..9831148, + |
Coexpression cluster: | C1074_chronic_testicular_melanoma_hepatocellular_pagetoid_acute_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.88e-19 | 8 |
neuron | 3.85e-12 | 6 |
neuroblast | 3.85e-12 | 6 |
electrically signaling cell | 3.85e-12 | 6 |
germ line cell | 2.04e-10 | 7 |
germ cell | 2.04e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 4.49e-19 | 8 |
cranial nerve II | 1.03e-17 | 1 |
cranial nerve | 1.03e-17 | 1 |
nerve trunk | 1.03e-17 | 1 |
nerve connecting eye with brain | 1.03e-17 | 1 |
nerve | 1.03e-17 | 1 |
retinal neural layer | 1.03e-17 | 1 |
presumptive neural retina | 1.03e-17 | 1 |
male reproductive organ | 4.62e-14 | 11 |
neural tissue | 1.57e-09 | 2 |
multi cell component structure | 1.57e-09 | 2 |
neuron projection bundle | 1.57e-09 | 2 |
gonad | 1.20e-07 | 21 |
indifferent external genitalia | 1.20e-07 | 21 |
indifferent gonad | 1.20e-07 | 21 |
gonad primordium | 1.20e-07 | 21 |
external genitalia | 2.52e-07 | 22 |
male organism | 2.52e-07 | 22 |
male reproductive system | 2.52e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.12e-09 | 2 |
chronic leukemia | 2.77e-09 | 8 |