FFCP PHASE1:Hg19::chr19:18391221..18391228,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:18391221..18391228,-
|short_description=p@chr19:18391221..18391228,-
|description=CAGE_peak_at_chr19:18391221..18391228,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:18391221..18391228,- | |||
|description=CAGE_peak_at_chr19:18391221..18391228,- | |||
|id=chr19:18391221..18391228,- | |||
|ontology_enrichment_celltype=CL:0000738!2.69e-11!140;CL:0002031!5.64e-09!124;CL:0000766!1.46e-08!76;CL:0002057!1.94e-08!42;CL:0000860!5.23e-08!45;CL:0000557!1.25e-07!71;CL:0002032!5.66e-07!165;CL:0000837!5.66e-07!165;CL:0000037!6.45e-07!172;CL:0000566!6.45e-07!172;CL:0000988!7.61e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.04e-22;3!CL:0000097;4.76e-13;5!CL:0002567;4.94e-10;3!CL:0000136;3.55e-09;13!CL:0000349;4.21e-09;19!CL:0000511;3.82e-08;1!CL:0002625;3.82e-08;1!CL:0002553;3.82e-08;1!CL:0000216;3.82e-08;1!CL:0000163;1.83e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.06e-22,3;CL:0000097,6.64e-13,5;CL:0002028,6.64e-13,5;CL:0002567,4.95e-10,3;CL:0000349,4.22e-09,19;CL:0000511,2.89e-08,1;CL:0002625,2.89e-08,1;CL:0000216,2.89e-08,1;CL:0002553,3.10e-08,1;CL:0000136,5.62e-08,15;CL:0000163,2.19e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.82e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.04e-22;3!UBERON:0000920;3.04e-22;3!UBERON:0005631;1.42e-11;10!UBERON:0000158;1.42e-11;10!UBERON:0007029;3.82e-08;1!UBERON:0001136;3.82e-08;1!UBERON:0000941;3.82e-08;1!UBERON:0001343;3.82e-08;1!UBERON:0001785;3.82e-08;1!UBERON:0002464;3.82e-08;1!UBERON:0004904;3.82e-08;1!UBERON:0001021;3.82e-08;1!UBERON:0004910;3.82e-08;1!UBERON:0004813;3.82e-08;1!UBERON:0000478;3.72e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.06e-22,3;UBERON:0003124,1.76e-16,7;UBERON:0005631,2.00e-12,14;UBERON:0000158,2.00e-12,14;UBERON:0001136,2.89e-08,1;UBERON:0001343,2.89e-08,1;UBERON:0004910,2.89e-08,1;UBERON:0005154,2.89e-08,1;UBERON:0005295,2.89e-08,1;UBERON:0004813,2.89e-08,1;UBERON:0005297,2.89e-08,1;UBERON:0005294,2.89e-08,1;UBERON:0010141,2.89e-08,1;UBERON:0005891,2.89e-08,1;UBERON:0007029,4.41e-08,1;UBERON:0000941,5.07e-08,1;UBERON:0001785,5.07e-08,1;UBERON:0002464,5.07e-08,1;UBERON:0004904,5.07e-08,1;UBERON:0001021,5.07e-08,1;UBERON:0003902,5.07e-08,1;UBERON:0005425,5.07e-08,1;UBERON:0000478,3.72e-07,24 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.309632246632152,0,0,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0.581592955118259,0.755751887377619,0.242584061187816,0,0.411167888021826,0,0,0,0,1.72372840368309,0.645484683583826,1.35426486594342,1.12945403725563,0.272906150057846,0.224723484445085,1.53041946185451,0.962787081228281,0.639337125799041,0,0.398927315243264,0,0,0,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0.316462387440884,0,0.425208599930087,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0,0.661044872784862,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0.501559486172034,0.32592226663359,0.473447805734733,1.94826728407911,0.111410456885174,0.883817722424512,0.221533894583621,0.270803863765016,0,0.390178042679635,0,0.276350017785848,0,0.444859689486181,0.535081656179426,0,0.113309342697566,0.766440987203842,0.68725489096526,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0.26591592103773,0.238490624305342,0.571994910780128,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.860413786167011,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.528290604079356,1.4512968087854,1.15295962733569,2.39860623510122,0,0.763976851116555,1.17217447210047,1.71072446022705,0.308482478109971,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0,0.902838299183157,2.27407504055985,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0.213455115606889,0,1.66435439510497,0.604780586659361,0.248107807818777,0,0.280660094433074,0.512556597022804,0.511707249066704,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.309123034943167,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0.111443384277478,0,0.47748896947538,1.48482340416319,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,2.17499872630438,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0,0.307801034015188,0,0,0.0897576444097721,0,2.23300811812344,2.01514705484097,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59223616106011,1.83309043480088,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0,0.751617097072463,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0.674921674654501,0.77380195455795,0,0,0,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.640724475406168,0.471612915298998,0.414239055347196,0,0,0.121792598380896,0,3.26410682021684,3.5096585163178,3.982492497925,3.27872630709804,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.265729680626726,0,0.327609848846413,0.245772908753719,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,1.60114149657094,0.352675943690684,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0.846774100381858,0,0.31020638566432,0,0.111855431797792,0.098150233615243,0.121917924982269,0,0.821302454849976,0,1.45713297917742,0,0,0.118920090777569,0,0,0,0.154348316215889,0,0,0,0,0,0.2970464003270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| ||
|short_description=p@chr19:18391221..18391228,- | |||
}} | }} |
Latest revision as of 05:07, 26 July 2015
Short description: | p@chr19:18391221..18391228, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18391221..18391228, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.06e-22 | 3 |
mast cell | 6.64e-13 | 5 |
basophil mast progenitor cell | 6.64e-13 | 5 |
light melanocyte | 4.95e-10 | 3 |
extraembryonic cell | 4.22e-09 | 19 |
androgen binding protein secreting cell | 2.89e-08 | 1 |
seminiferous tubule epithelial cell | 2.89e-08 | 1 |
Sertoli cell | 2.89e-08 | 1 |
lung fibroblast | 3.10e-08 | 1 |
fat cell | 5.62e-08 | 15 |
endocrine cell | 2.19e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.06e-22 | 3 |
chorion | 1.76e-16 | 7 |
extraembryonic membrane | 2.00e-12 | 14 |
membranous layer | 2.00e-12 | 14 |
mesothelium | 2.89e-08 | 1 |
seminiferous tubule of testis | 2.89e-08 | 1 |
epithelium of male gonad | 2.89e-08 | 1 |
epithelial cord | 2.89e-08 | 1 |
sex cord | 2.89e-08 | 1 |
seminiferous tubule epithelium | 2.89e-08 | 1 |
testis sex cord | 2.89e-08 | 1 |
genital ridge | 2.89e-08 | 1 |
primitive sex cord of indifferent gonad | 2.89e-08 | 1 |
coelomic epithelium | 2.89e-08 | 1 |
surface | 4.41e-08 | 1 |
cranial nerve II | 5.07e-08 | 1 |
cranial nerve | 5.07e-08 | 1 |
nerve trunk | 5.07e-08 | 1 |
nerve connecting eye with brain | 5.07e-08 | 1 |
nerve | 5.07e-08 | 1 |
retinal neural layer | 5.07e-08 | 1 |
presumptive neural retina | 5.07e-08 | 1 |
extraembryonic structure | 3.72e-07 | 24 |