FFCP PHASE1:Hg19::chr3:101039402..101039429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50939 | |EntrezGene=50939 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18362 | |HGNC=18362 | ||
|TSSclassifier=strong | |||
|UniProt=F1T0J3,Q9BZV3 | |UniProt=F1T0J3,Q9BZV3 | ||
|association_with_transcript=0bp_to_ENST00000193391,NM_016247,uc003duq.1_5end | |association_with_transcript=0bp_to_ENST00000193391,NM_016247,uc003duq.1_5end | ||
|cluster_id=chr3:101039402..101039429,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_1_at_IMPG2_5end | |description=CAGE_peak_1_at_IMPG2_5end | ||
|id=chr3:101039402..101039429,- | |id=chr3:101039402..101039429,- | ||
|ontology_enrichment_celltype=CL:0000064!1.97e-11!3;CL:0005012!1.97e-11!3;CL:0000067!1.97e-11!3;CL:0002304!1.97e-11!3 | |ontology_enrichment_celltype=CL:0000064!1.97e-11!3;CL:0005012!1.97e-11!3;CL:0000067!1.97e-11!3;CL:0002304!1.97e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000306;9.90e-07;4!CL:0002222;9.90e-07;4!CL:0002224;9.90e-07;4 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.10e-30;3!UBERON:0006238;5.10e-09;10 | |||
|ontology_enrichment_disease=DOID:178!3.00e-09!1;DOID:326!3.00e-09!1;DOID:3978!3.00e-09!1;DOID:3394!3.00e-09!1;DOID:5844!3.00e-09!1;DOID:5409!5.74e-09!4 | |ontology_enrichment_disease=DOID:178!3.00e-09!1;DOID:326!3.00e-09!1;DOID:3978!3.00e-09!1;DOID:3394!3.00e-09!1;DOID:5844!3.00e-09!1;DOID:5409!5.74e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:3093;2.42e-08;11!DOID:5409;8.37e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.46e-08,11;DOID:5409,8.14e-07,4 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.04e-45,2;UBERON:0002757,2.04e-45,2;UBERON:0010134,2.04e-45,2;UBERON:0005408,2.04e-45,2;UBERON:0001899,2.04e-45,2;UBERON:0003296,2.63e-23,4;UBERON:0010133,2.63e-23,4;UBERON:0002784,2.63e-23,4;UBERON:0000970,3.94e-17,21;UBERON:0002104,3.94e-17,21;UBERON:0000966,1.13e-15,6;UBERON:0005388,1.13e-15,6;UBERON:0001802,1.13e-15,6;UBERON:0000020,4.75e-15,24;UBERON:0001032,4.75e-15,24;UBERON:0004456,4.75e-15,24;UBERON:0001894,8.94e-14,7;UBERON:0006222,8.94e-14,7;UBERON:0002360,3.24e-12,2;UBERON:0000094,3.24e-12,2;UBERON:0010743,3.24e-12,2;UBERON:0000019,1.55e-10,20;UBERON:0000047,1.55e-10,20;UBERON:0010312,1.55e-10,20;UBERON:0004088,1.55e-10,20;UBERON:0010230,1.55e-10,20;UBERON:0003072,1.55e-10,20;UBERON:0004128,1.55e-10,20;UBERON:0003071,1.55e-10,20;UBERON:0001456,1.23e-09,22;UBERON:0003056,4.33e-09,61;UBERON:0005085,5.19e-07,31;UBERON:0001017,7.97e-07,81;UBERON:0003075,8.18e-07,82;UBERON:0007284,8.18e-07,82 | |||
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|short_description=p1@IMPG2 | |short_description=p1@IMPG2 | ||
}} | }} |
Latest revision as of 06:32, 19 September 2015
Short description: | p1@IMPG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IMPG2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000193391, NM_016247, uc003duq.1_5end |
EntrezGene: | IMPG2 |
HGNC: | 18362 |
UniProt: | F1T0J3Q9BZV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.04e-45 | 2 |
regional part of epithalamus | 2.04e-45 | 2 |
secretory circumventricular organ | 2.04e-45 | 2 |
circumventricular organ | 2.04e-45 | 2 |
epithalamus | 2.04e-45 | 2 |
gland of diencephalon | 2.63e-23 | 4 |
neuroendocrine gland | 2.63e-23 | 4 |
regional part of diencephalon | 2.63e-23 | 4 |
eye | 3.94e-17 | 21 |
visual system | 3.94e-17 | 21 |
retina | 1.13e-15 | 6 |
photoreceptor array | 1.13e-15 | 6 |
posterior segment of eyeball | 1.13e-15 | 6 |
sense organ | 4.75e-15 | 24 |
sensory system | 4.75e-15 | 24 |
entire sense organ system | 4.75e-15 | 24 |
diencephalon | 8.94e-14 | 7 |
future diencephalon | 8.94e-14 | 7 |
meninx | 3.24e-12 | 2 |
membrane organ | 3.24e-12 | 2 |
meningeal cluster | 3.24e-12 | 2 |
camera-type eye | 1.55e-10 | 20 |
simple eye | 1.55e-10 | 20 |
immature eye | 1.55e-10 | 20 |
ocular region | 1.55e-10 | 20 |
eyeball of camera-type eye | 1.55e-10 | 20 |
optic cup | 1.55e-10 | 20 |
optic vesicle | 1.55e-10 | 20 |
eye primordium | 1.55e-10 | 20 |
face | 1.23e-09 | 22 |
pre-chordal neural plate | 4.33e-09 | 61 |
ectodermal placode | 5.19e-07 | 31 |
central nervous system | 7.97e-07 | 81 |
neural plate | 8.18e-07 | 82 |
presumptive neural plate | 8.18e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.46e-08 | 11 |
lung small cell carcinoma | 8.14e-07 | 4 |