FFCP PHASE1:Hg19::chr19:41086211..41086242,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:41086211..41086242,+
|short_description=p3@SHKBP1
|description=CAGE_peak_3_at_SHKBP1_5end
|association_with_transcript=56bp_to_AK297006_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92799 | |EntrezGene=92799 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19214 | |HGNC=19214 | ||
|TSSclassifier=strong | |||
|UniProt=B4DLI0 | |UniProt=B4DLI0 | ||
|association_with_transcript=56bp_to_AK297006_5end | |||
|cluster_id=chr19:41086211..41086242,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_SHKBP1_5end | |||
|id=chr19:41086211..41086242,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.82e-60!42;CL:0000860!8.39e-55!45;CL:0000766!2.60e-50!76;CL:0002194!1.17e-41!63;CL:0000576!1.17e-41!63;CL:0000040!1.17e-41!63;CL:0000559!1.17e-41!63;CL:0002009!6.68e-40!65;CL:0000839!1.40e-37!70;CL:0000557!7.88e-37!71;CL:0000763!3.34e-32!112;CL:0000049!3.34e-32!112;CL:0000738!7.79e-29!140;CL:0002087!3.00e-23!119;CL:0000988!7.14e-23!182;CL:0000037!1.52e-22!172;CL:0000566!1.52e-22!172;CL:0002032!2.93e-20!165;CL:0000837!2.93e-20!165;CL:0002031!2.87e-19!124;CL:0000094!9.76e-14!8;CL:0002393!1.99e-10!9;CL:0002397!1.99e-10!9;CL:0000081!2.04e-09!11;CL:0000134!2.13e-07!358;CL:0002320!2.61e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.16e-103;33!CL:0002057;2.16e-103;33!CL:0000473;6.19e-77;39!CL:0000234;6.19e-77;39!CL:0000576;5.91e-61;48!CL:0000766;6.90e-47;69!CL:0000094;4.35e-29;8!CL:0000081;9.12e-21;11!CL:0000763;9.38e-21;100!CL:0002087;7.22e-15;104!CL:0000738;2.38e-13;136!CL:0000775;1.50e-12;3!CL:0000767;5.49e-11;3!CL:0002393;1.36e-09;6!CL:0002397;1.36e-09;6!CL:0000771;4.65e-09;2!CL:0000988;1.36e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.58e-117,42;CL:0002057,6.58e-117,42;CL:0000473,1.68e-106,48;CL:0000234,1.68e-106,48;CL:0000766,4.78e-101,72;CL:0002194,2.72e-83,59;CL:0000576,2.72e-83,59;CL:0000040,2.72e-83,59;CL:0000559,2.72e-83,59;CL:0002009,2.69e-80,61;CL:0000839,1.36e-73,66;CL:0000557,2.28e-72,67;CL:0000763,3.53e-64,108;CL:0000049,3.53e-64,108;CL:0000738,4.23e-56,136;CL:0000037,2.06e-43,168;CL:0002087,5.20e-43,115;CL:0000988,1.15e-40,177;CL:0002032,1.07e-39,161;CL:0000837,1.07e-39,161;CL:0002031,1.75e-36,120;CL:0000094,4.05e-29,8;CL:0000081,8.66e-21,11;CL:0000134,6.87e-15,354;CL:0002320,2.18e-14,361;CL:0000219,1.28e-12,386;CL:0000775,1.50e-12,3;CL:0000034,3.29e-11,441;CL:0000767,5.12e-11,3;CL:0000048,1.86e-10,427;CL:0000723,3.69e-10,433;CL:0002393,2.09e-09,9;CL:0002397,2.09e-09,9;CL:0000771,4.65e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.98e-84;42!CL:0000049;2.04e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.97e-40!102;UBERON:0003061!4.97e-40!102;UBERON:0002193!1.04e-34!112;UBERON:0002371!5.31e-34!80;UBERON:0001474!1.64e-30!86;UBERON:0004765!1.79e-27!101;UBERON:0001434!1.79e-27!101;UBERON:0002405!8.37e-23!115;UBERON:0003081!6.98e-16!216;UBERON:0002204!3.01e-15!167;UBERON:0000926!6.35e-07!448;UBERON:0004120!6.35e-07!448;UBERON:0006603!6.35e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.78e-07;15!UBERON:0000179;1.78e-07;15!UBERON:0000463;1.78e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.09e-63,98;UBERON:0003061,1.09e-63,98;UBERON:0002371,8.60e-63,76;UBERON:0001474,1.46e-57,82;UBERON:0002193,6.81e-57,108;UBERON:0004765,1.17e-51,90;UBERON:0002405,1.05e-49,93;UBERON:0001434,1.34e-45,100;UBERON:0003081,1.47e-25,203;UBERON:0002204,1.28e-23,167;UBERON:0002384,1.06e-13,371;UBERON:0000926,7.70e-13,315;UBERON:0004120,7.70e-13,315;UBERON:0006603,7.70e-13,315;UBERON:0000178,1.79e-07,15;UBERON:0000179,1.79e-07,15;UBERON:0000463,1.79e-07,15 | |||
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| ||
|short_description=p3@SHKBP1 | |||
}} | }} |
Latest revision as of 02:24, 18 September 2015
Short description: | p3@SHKBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SHKBP1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 56bp_to_AK297006_5end |
EntrezGene: | SHKBP1 |
HGNC: | 19214 |
UniProt: | B4DLI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.09e-63 | 98 |
blood island | 1.09e-63 | 98 |
bone marrow | 8.60e-63 | 76 |
bone element | 1.46e-57 | 82 |
hemolymphoid system | 6.81e-57 | 108 |
skeletal element | 1.17e-51 | 90 |
immune system | 1.05e-49 | 93 |
skeletal system | 1.34e-45 | 100 |
lateral plate mesoderm | 1.47e-25 | 203 |
musculoskeletal system | 1.28e-23 | 167 |
connective tissue | 1.06e-13 | 371 |
mesoderm | 7.70e-13 | 315 |
mesoderm-derived structure | 7.70e-13 | 315 |
presumptive mesoderm | 7.70e-13 | 315 |
blood | 1.79e-07 | 15 |
haemolymphatic fluid | 1.79e-07 | 15 |
organism substance | 1.79e-07 | 15 |