FFCP PHASE1:Hg19::chr8:80289025..80289040,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:80289025..80289040,- | |||
|coexpression_cluster_id=C312 | |coexpression_cluster_id=C312 | ||
|description=CAGE_peak_at_chr8:80289025..80289040,- | |description=CAGE_peak_at_chr8:80289025..80289040,- | ||
|id=chr8:80289025..80289040,- | |id=chr8:80289025..80289040,- | ||
|ontology_enrichment_celltype=CL:1000415!9.25e-08!2 | |ontology_enrichment_celltype=CL:1000415!9.25e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;4.32e-26;2!CL:0000322;1.03e-17;3!CL:0000082;1.77e-11;19!CL:0002202;8.61e-07;9!CL:0002632;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,4.32e-26,2;CL:0000322,9.46e-18,3;CL:0000082,1.72e-11,19;CL:0002202,8.37e-07,9;CL:0002632,8.37e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.03e-08;29!UBERON:0001041;1.19e-07;30 | |||
|ontology_enrichment_disease=DOID:6193!7.55e-14!1;DOID:3112!1.42e-13!1;DOID:162!1.17e-08!235;DOID:14566!1.94e-08!239;DOID:1325!2.99e-08!7;DOID:3904!2.99e-08!7;DOID:3910!1.05e-07!2;DOID:3350!1.45e-07!2;DOID:1036!4.28e-07!8 | |ontology_enrichment_disease=DOID:6193!7.55e-14!1;DOID:3112!1.42e-13!1;DOID:162!1.17e-08!235;DOID:14566!1.94e-08!239;DOID:1325!2.99e-08!7;DOID:3904!2.99e-08!7;DOID:3910!1.05e-07!2;DOID:3350!1.45e-07!2;DOID:1036!4.28e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:1325;3.92e-29;7!DOID:3904;3.92e-29;7!DOID:3910;8.10e-26;2!DOID:3905;6.07e-23;9!DOID:1324;3.04e-14;15!DOID:5409;1.00e-13;4!DOID:0050615;2.01e-13;16!DOID:3908;3.42e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,3.65e-29,7;DOID:3904,3.65e-29,7;DOID:3910,7.14e-26,2;DOID:3905,5.74e-23,9;DOID:1324,2.94e-14,15;DOID:5409,1.00e-13,4;DOID:0050615,1.95e-13,16;DOID:3908,3.26e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0001282!1.83e-13!1;UBERON:0009842!1.83e-13!1;UBERON:0003704!1.83e-13!1;UBERON:0001171!1.83e-13!1;UBERON:0001172!1.83e-13!1;UBERON:0002294!4.42e-08!7;UBERON:0001173!4.42e-08!7;UBERON:0004912!4.42e-08!7;UBERON:0004903!1.05e-07!2;UBERON:0002173!1.05e-07!2;UBERON:0002186!1.05e-07!2 | |ontology_enrichment_uberon=UBERON:0001282!1.83e-13!1;UBERON:0009842!1.83e-13!1;UBERON:0003704!1.83e-13!1;UBERON:0001171!1.83e-13!1;UBERON:0001172!1.83e-13!1;UBERON:0002294!4.42e-08!7;UBERON:0001173!4.42e-08!7;UBERON:0004912!4.42e-08!7;UBERON:0004903!1.05e-07!2;UBERON:0002173!1.05e-07!2;UBERON:0002186!1.05e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;8.10e-26;2!UBERON:0002173;8.10e-26;2!UBERON:0002186;8.10e-26;2!UBERON:0002110;6.76e-18;3!UBERON:0004821;1.03e-17;3!UBERON:0007499;1.03e-17;3!UBERON:0003215;1.03e-17;3!UBERON:0010368;1.03e-17;3!UBERON:0009911;1.03e-17;3!UBERON:0002299;1.03e-17;3!UBERON:0006524;1.03e-17;3!UBERON:0008874;1.03e-17;3!UBERON:0002169;1.03e-17;3!UBERON:0004894;1.03e-17;3!UBERON:0009856;1.21e-13;4!UBERON:0004802;1.77e-11;19!UBERON:0000115;1.77e-11;19!UBERON:0002048;4.64e-10;22!UBERON:0004807;4.64e-10;22!UBERON:0000117;4.64e-10;22!UBERON:0000171;4.64e-10;22!UBERON:0000170;4.64e-10;22!UBERON:0002294;1.89e-08;7!UBERON:0001173;1.89e-08;7!UBERON:0005911;3.63e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,7.14e-26,2;UBERON:0002173,7.14e-26,2;UBERON:0002186,7.14e-26,2;UBERON:0002110,6.76e-18,3;UBERON:0006242,6.76e-18,3;UBERON:0004821,9.46e-18,3;UBERON:0003215,9.46e-18,3;UBERON:0010368,9.46e-18,3;UBERON:0009911,9.46e-18,3;UBERON:0002299,9.46e-18,3;UBERON:0006524,9.46e-18,3;UBERON:0008874,9.46e-18,3;UBERON:0002169,9.46e-18,3;UBERON:0004894,9.46e-18,3;UBERON:0004802,1.72e-11,19;UBERON:0000115,1.72e-11,19;UBERON:0002048,4.53e-10,22;UBERON:0000117,4.53e-10,22;UBERON:0000171,4.53e-10,22;UBERON:0000170,4.53e-10,22;UBERON:0005597,4.53e-10,22;UBERON:0000118,4.53e-10,22;UBERON:0004807,3.92e-08,28;UBERON:0005178,7.16e-07,34;UBERON:0002224,7.16e-07,34;UBERON:0002294,7.48e-07,9;UBERON:0001173,7.48e-07,9;UBERON:0004912,7.48e-07,9 | |||
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|short_description=p@chr8:80289025..80289040,- | |short_description=p@chr8:80289025..80289040,- | ||
}} | }} |
Latest revision as of 19:59, 31 July 2015
Short description: | p@chr8:80289025..80289040, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:80289025..80289040, - |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 4.32e-26 | 2 |
pneumocyte | 9.46e-18 | 3 |
epithelial cell of lung | 1.72e-11 | 19 |
epithelial cell of tracheobronchial tree | 8.37e-07 | 9 |
epithelial cell of lower respiratory tract | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 7.14e-26 | 2 |
alveolar duct | 7.14e-26 | 2 |
bronchiole | 7.14e-26 | 2 |
gallbladder | 6.76e-18 | 3 |
gall bladder primordium | 6.76e-18 | 3 |
pulmonary alveolus epithelium | 9.46e-18 | 3 |
alveolus | 9.46e-18 | 3 |
pulmonary lobule | 9.46e-18 | 3 |
lobule | 9.46e-18 | 3 |
alveolus of lung | 9.46e-18 | 3 |
alveolar system | 9.46e-18 | 3 |
pulmonary acinus | 9.46e-18 | 3 |
alveolar sac | 9.46e-18 | 3 |
alveolar wall | 9.46e-18 | 3 |
respiratory tract epithelium | 1.72e-11 | 19 |
lung epithelium | 1.72e-11 | 19 |
lung | 4.53e-10 | 22 |
respiratory tube | 4.53e-10 | 22 |
respiration organ | 4.53e-10 | 22 |
pair of lungs | 4.53e-10 | 22 |
lung primordium | 4.53e-10 | 22 |
lung bud | 4.53e-10 | 22 |
respiratory system epithelium | 3.92e-08 | 28 |
thoracic cavity element | 7.16e-07 | 34 |
thoracic cavity | 7.16e-07 | 34 |
biliary system | 7.48e-07 | 9 |
biliary tree | 7.48e-07 | 9 |
biliary bud | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 3.65e-29 | 7 |
bronchogenic carcinoma | 3.65e-29 | 7 |
lung adenocarcinoma | 7.14e-26 | 2 |
lung carcinoma | 5.74e-23 | 9 |
lung cancer | 2.94e-14 | 15 |
lung small cell carcinoma | 1.00e-13 | 4 |
respiratory system cancer | 1.95e-13 | 16 |
non-small cell lung carcinoma | 3.26e-11 | 5 |