FF:12181-129A3: Difference between revisions

Latest revision as of 18:33, 4 June 2020

Name:	Whole blood (ribopure), donor090309, donation3
Species:	Human (Homo sapiens)
Library ID:	CNhs11948,RDhi10002
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	NA
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Matched_genome_OSC(contact:Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
RNA-Seq		SAMD00013674

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11948		CAGE		DRX008531		DRR009403
RDhi10002		RNA-Seq		DRX012355		DRR013803

Accession ID Hg19

Library id		BAM		CTSS
CNhs11948		DRZ000828		DRZ002213
RDhi10002		DRZ003004

Accession ID Hg38

Library id		BAM		CTSS
CNhs11948		DRZ012178		DRZ013563
RDhi10002

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.158
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0.33
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.338
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.267
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	1.183
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.33
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.167
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.497
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.356
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.516
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.105
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.33
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.196
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0.196
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.437
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0.474
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.641
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.33
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.183
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	1.161
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.196
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.549
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.182
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.555
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.196
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.626
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.196
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.698
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.766
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.196
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0.196
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0.196
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.931
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0.196
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.433
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11948

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	1.38341e-9
MA0003.1	MA0003.1	0.0755
MA0004.1	MA0004.1	0.44
MA0006.1	MA0006.1	0.455
MA0007.1	MA0007.1	0.778
MA0009.1	MA0009.1	0.0472
MA0014.1	MA0014.1	0.723
MA0017.1	MA0017.1	0.0875
MA0018.2	MA0018.2	0.00646
MA0019.1	MA0019.1	0.304
MA0024.1	MA0024.1	0.00738
MA0025.1	MA0025.1	0.393
MA0027.1	MA0027.1	0.724
MA0028.1	MA0028.1	0.757
MA0029.1	MA0029.1	0.662
MA0030.1	MA0030.1	0.108
MA0031.1	MA0031.1	2.48723e-4
MA0035.2	MA0035.2	8.82658e-5
MA0038.1	MA0038.1	0.00299
MA0039.2	MA0039.2	0.404
MA0040.1	MA0040.1	0.542
MA0041.1	MA0041.1	0.767
MA0042.1	MA0042.1	0.732
MA0043.1	MA0043.1	0.444
MA0046.1	MA0046.1	0.282
MA0047.2	MA0047.2	0.343
MA0048.1	MA0048.1	0.222
MA0050.1	MA0050.1	3.93205e-6
MA0051.1	MA0051.1	0.0613
MA0052.1	MA0052.1	0.00905
MA0055.1	MA0055.1	0.0286
MA0057.1	MA0057.1	0.907
MA0058.1	MA0058.1	0.436
MA0059.1	MA0059.1	0.458
MA0060.1	MA0060.1	4.05596e-6
MA0061.1	MA0061.1	0.0999
MA0062.2	MA0062.2	0.0127
MA0065.2	MA0065.2	0.141
MA0066.1	MA0066.1	0.279
MA0067.1	MA0067.1	0.521
MA0068.1	MA0068.1	0.966
MA0069.1	MA0069.1	0.551
MA0070.1	MA0070.1	0.0135
MA0071.1	MA0071.1	0.564
MA0072.1	MA0072.1	0.53
MA0073.1	MA0073.1	0.436
MA0074.1	MA0074.1	0.804
MA0076.1	MA0076.1	0.833
MA0077.1	MA0077.1	0.286
MA0078.1	MA0078.1	0.908
MA0079.2	MA0079.2	0.813
MA0080.2	MA0080.2	9.59064e-18
MA0081.1	MA0081.1	0.00515
MA0083.1	MA0083.1	0.638
MA0084.1	MA0084.1	0.868
MA0087.1	MA0087.1	0.748
MA0088.1	MA0088.1	0.416
MA0090.1	MA0090.1	0.011
MA0091.1	MA0091.1	0.168
MA0092.1	MA0092.1	0.846
MA0093.1	MA0093.1	0.335
MA0099.2	MA0099.2	0.107
MA0100.1	MA0100.1	0.681
MA0101.1	MA0101.1	0.987
MA0102.2	MA0102.2	0.00468
MA0103.1	MA0103.1	0.12
MA0104.2	MA0104.2	0.276
MA0105.1	MA0105.1	6.45333e-4
MA0106.1	MA0106.1	0.484
MA0107.1	MA0107.1	0.832
MA0108.2	MA0108.2	1.02326e-6
MA0111.1	MA0111.1	0.201
MA0112.2	MA0112.2	0.00126
MA0113.1	MA0113.1	0.487
MA0114.1	MA0114.1	0.412
MA0115.1	MA0115.1	0.774
MA0116.1	MA0116.1	2.75115e-5
MA0117.1	MA0117.1	0.675
MA0119.1	MA0119.1	0.423
MA0122.1	MA0122.1	0.953
MA0124.1	MA0124.1	0.768
MA0125.1	MA0125.1	0.0823
MA0131.1	MA0131.1	0.538
MA0135.1	MA0135.1	0.516
MA0136.1	MA0136.1	1.40736e-20
MA0137.2	MA0137.2	0.655
MA0138.2	MA0138.2	0.352
MA0139.1	MA0139.1	0.297
MA0140.1	MA0140.1	1.83249e-12
MA0141.1	MA0141.1	0.467
MA0142.1	MA0142.1	0.898
MA0143.1	MA0143.1	0.823
MA0144.1	MA0144.1	0.256
MA0145.1	MA0145.1	0.111
MA0146.1	MA0146.1	0.00311
MA0147.1	MA0147.1	0.264
MA0148.1	MA0148.1	0.638
MA0149.1	MA0149.1	0.419
MA0150.1	MA0150.1	0.0683
MA0152.1	MA0152.1	0.0282
MA0153.1	MA0153.1	0.0331
MA0154.1	MA0154.1	0.00629
MA0155.1	MA0155.1	0.705
MA0156.1	MA0156.1	1.97586e-12
MA0157.1	MA0157.1	0.00331
MA0159.1	MA0159.1	0.189
MA0160.1	MA0160.1	0.653
MA0162.1	MA0162.1	0.469
MA0163.1	MA0163.1	1.70963e-5
MA0164.1	MA0164.1	0.653
MA0258.1	MA0258.1	0.0102
MA0259.1	MA0259.1	0.198

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11948

Novel motif	Logo	P-value
1	1	0.134
10	10	0.0499
100	100	0.643
101	101	0.181
102	102	0.504
103	103	0.339
104	104	0.717
105	105	0.349
106	106	0.0131
107	107	0.429
108	108	0.993
109	109	0.133
11	11	0.0808
110	110	0.347
111	111	0.255
112	112	0.0919
113	113	0.169
114	114	0.0444
115	115	0.634
116	116	0.604
117	117	0.0323
118	118	0.269
119	119	0.33
12	12	0.361
120	120	0.415
121	121	0.953
122	122	0.577
123	123	0.00978
124	124	0.267
125	125	0.203
126	126	0.547
127	127	0.276
128	128	0.0155
129	129	0.614
13	13	0.95
130	130	0.426
131	131	0.974
132	132	0.655
133	133	0.859
134	134	0.911
135	135	0.415
136	136	0.98
137	137	0.0112
138	138	0.048
139	139	0.00933
14	14	0.161
140	140	0.211
141	141	0.43
142	142	0.742
143	143	0.00313
144	144	0.614
145	145	0.166
146	146	0.968
147	147	0.131
148	148	0.0927
149	149	0.472
15	15	0.0776
150	150	0.747
151	151	0.195
152	152	0.194
153	153	0.515
154	154	0.74
155	155	0.253
156	156	0.756
157	157	0.268
158	158	0.471
159	159	0.187
16	16	0.363
160	160	0.453
161	161	0.226
162	162	0.861
163	163	0.472
164	164	0.183
165	165	0.109
166	166	0.86
167	167	0.846
168	168	0.237
169	169	0.0136
17	17	0.375
18	18	0.558
19	19	0.226
2	2	0.207
20	20	0.663
21	21	0.187
22	22	0.217
23	23	0.107
24	24	0.049
25	25	0.32
26	26	0.141
27	27	0.102
28	28	0.536
29	29	0.507
3	3	0.0644
30	30	0.863
31	31	0.545
32	32	0.966
33	33	0.75
34	34	0.247
35	35	0.2
36	36	0.51
37	37	0.153
38	38	0.362
39	39	0.943
4	4	0.79
40	40	0.471
41	41	0.257
42	42	0.247
43	43	0.146
44	44	0.207
45	45	0.523
46	46	0.0785
47	47	0.154
48	48	0.263
49	49	0.105
5	5	0.339
50	50	0.88
51	51	0.389
52	52	0.454
53	53	0.098
54	54	0.265
55	55	0.0867
56	56	0.301
57	57	0.628
58	58	0.0845
59	59	0.0533
6	6	0.751
60	60	0.0635
61	61	0.275
62	62	0.0213
63	63	0.527
64	64	0.313
65	65	0.184
66	66	0.347
67	67	0.179
68	68	0.552
69	69	0.178
7	7	0.284
70	70	0.063
71	71	0.114
72	72	0.248
73	73	0.231
74	74	0.986
75	75	0.0904
76	76	0.433
77	77	0.495
78	78	0.328
79	79	0.567
8	8	0.294
80	80	0.121
81	81	0.224
82	82	0.0152
83	83	0.481
84	84	0.195
85	85	0.165
86	86	0.127
87	87	0.556
88	88	0.712
89	89	0.546
9	9	0.282
90	90	0.0174
91	91	0.32
92	92	0.0559
93	93	0.478
94	94	0.201
95	95	0.322
96	96	0.068
97	97	0.671
98	98	0.0297
99	99	0.661

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11948

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000281 human whole blood sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000178 (blood)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000179 (haemolymphatic fluid)
0000463 (organism substance)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0002390 (hematopoietic system)
0004535 (cardiovascular system)
0002193 (hemolymphoid system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0010053 (human blood - adult sample)
0000004 (tissue sample)
0000281 (human whole blood sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000922,UBERON:0000178,UBERON:0000926,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000480,UBERON:0000923,UBERON:0002050,UBERON:0005423,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0005291,UBERON:0006598,UBERON:0002532,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0003081,UBERON:0001009,UBERON:0006603,UBERON:0003061
+|DRA_sample_Accession=RNA-Seq@SAMD00013674
+|accession_numbers=CAGE;DRX008531;DRR009403;DRZ000828;DRZ002213;DRZ012178;DRZ013563!RNA-Seq;DRX012355;DRR013803;DRZ003004;
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000178,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0001009
 |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0010053,FF:0000004,FF:0000281
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chrX:131623044..131623089,-!p1@MBNL3!3.00!3955.63!MBNL3;;chr11:47400078..47400106,-!p1@SPI1!2.71!508.69!SPI1;;chrX:131623026..131623039,-!p5@MBNL3!2.58!382.80!MBNL3;;chr12:54694653..54694672,-!p2@NFE2!2.56!358.88!NFE2;;chr12:54694758..54694805,-!p1@NFE2!2.46!340.65!NFE2;;chrX:70315688..70315709,+!p1@FOXO4!2.39!553.13!FOXO4;;chr7:28220506..28220552,-!p3@JAZF1!2.38!236.40!JAZF1;;chr2:68592406..68592424,+!p1@PLEK!2.32!207.92!PLEK;;chrX:131622958..131622978,-!p3@MBNL3!2.31!254.06!MBNL3;;chr10:51585449..51585487,+!p6@NCOA4!2.29!192.54!NCOA4;;chrX:131622988..131623006,-!p8@MBNL3!2.27!184.57!MBNL3;;chr7:28220354..28220441,-!p1@JAZF1!2.26!2600.44!JAZF1;;chr12:54694807..54694832,-!p3@NFE2!2.23!169.19!NFE2;;chr19:13213511..13213545,-!p2@LYL1!2.13!146.40!LYL1;;chr10:51572339..51572376,+!p4@NCOA4!2.09!264.32!NCOA4;;chr11:47400062..47400077,-!p2@SPI1!2.02!103.11!SPI1;;chr2:70142232..70142251,+!p1@MXD1!1.98!508.13!MXD1;;chr19:12998003..12998021,-!p1@KLF1!1.94!86.02!KLF1;;chr3:128212033..128212051,-!p1@GATA2!1.94!85.45!GATA2;;chr10:51572408..51572454,+!p3@NCOA4!1.93!469.39!NCOA4;;chr10:51585430..51585448,+!p7@NCOA4!1.81!63.80!NCOA4;;chr7:50344289..50344323,+!p1@IKZF1!1.80!62.66!IKZF1;;chr10:111985713..111985774,+!p2@MXI1!1.78!529.77!MXI1;;chr16:85932760..85932775,+!p1@IRF8!1.75!55.26!IRF8;;chr1:47697965..47697991,-!p7@TAL1!1.74!53.55!TAL1;;chr21:34442439..34442455,+!p1@OLIG1!1.73!52.98!OLIG1;;chr9:117150254..117150271,-!p1@AKNA!1.69!128.17!AKNA;;chr7:50343634..50343717,+!p2@IKZF1!1.67!46.14!IKZF1;;chr11:47399947..47399961,-!p3@SPI1!1.67!45.57!SPI1;;chr19:13213555..13213568,-!p5@LYL1!1.67!45.57!LYL1;;chr12:54778471..54778528,-!p1@ZNF385A!1.65!43.86!ZNF385A;;chr11:47399996..47400014,-!p4@SPI1!1.65!43.29!SPI1;;chr2:148778973..148779035,+!p3@MBD5!1.63!105.38!MBD5;;chr1:23857325..23857416,-!p2@E2F2!1.62!47.28!E2F2;;chr11:47400032..47400043,-!p5@SPI1!1.61!39.31!SPI1;;chr7:28725715..28725727,+!p3@CREB5!1.60!45.57!CREB5;;chr1:43148855..43148908,+!p4@YBX1!1.57!56.40!YBX1;;chr19:13213662..13213686,-!p1@LYL1!1.57!52.41!LYL1;;chr17:79881433..79881452,-!p6@MAFG!1.57!35.89!MAFG;;chr1:25256756..25256774,-!p1@RUNX3!1.56!65.51!RUNX3;;chr5:133451294..133451310,+!p2@TCF7!1.56!35.32!TCF7;;chr17:45810594..45810608,+!p1@TBX21!1.56!35.32!TBX21;;chrX:48644984..48645005,+!p1@GATA1!1.55!34.75!GATA1;;chr3:141748010..141748030,-!p8@TFDP2!1.54!33.61!TFDP2;;chr4:109087445..109087463,-!p1@LEF1!1.53!33.04!LEF1;;chr2:68592394..68592405,+!p2@PLEK!1.52!32.47!PLEK;;chr3:27763807..27763822,-!p1@EOMES!1.52!31.90!EOMES;;chr10:111967345..111967422,+!p1@MXI1!1.50!479.64!MXI1;;chr20:50159198..50159299,-!p1@NFATC2!1.50!44.43!NFATC2;;chr11:47400045..47400060,-!p6@SPI1!1.50!30.76!SPI1;;chr19:16435625..16435682,+!p1@KLF2!1.49!908.02!KLF2;;chr12:10875831..10876025,-!p1@CSDA!1.48!2285.42!CSDA;;chr3:187463179..187463201,-!p2@BCL6!1.48!115.64!BCL6;;chr20:56195474..56195506,-!p1@ZBP1!1.48!29.05!ZBP1;;chr5:176735063..176735088,-!p2@MXD3!1.48!29.05!MXD3;;chr9:135854091..135854159,+!p1@GFI1B!1.47!28.48!GFI1B;;chr6:108881012..108881034,+!p3@FOXO3!1.46!96.27!FOXO3;;chr19:50922187..50922204,+!p1@SPIB!1.46!27.91!SPIB;;chr2:231090433..231090469,+!p1@SP140!1.43!26.20!SP140;;chr19:13213634..13213645,-!p8@LYL1!1.43!25.63!LYL1;;chr2:70167296..70167306,+!p3@MXD1!1.42!38.74!MXD1;;chr6:144385698..144385742,-!p2@PLAGL1!1.42!30.76!PLAGL1;;chr5:133450365..133450444,+!p1@TCF7!1.41!110.51!TCF7;;chr12:54689532..54689551,-!p4@NFE2!1.41!24.49!NFE2;;chr3:63953435..63953499,+!p1@ATXN7!1.41!24.49!ATXN7;;chr7:28725740..28725778,+!p1@CREB5!1.39!202.79!CREB5;;chr6:391743..391759,+!p1@IRF4!1.39!23.36!IRF4;;chr12:54689552..54689574,-!p6@NFE2!1.39!23.36!NFE2;;chr2:28618532..28618610,+!p4@FOSL2!1.38!39.31!FOSL2;;chrX:106960285..106960299,-!p1@TSC22D3!1.33!530.91!TSC22D3;;chrX:106960180..106960197,-!p2@TSC22D3!1.33!76.33!TSC22D3;;chr2:208031943..208031978,-!p5@KLF7!1.33!27.34!KLF7;;chr11:128563948..128564003,+!p1@FLI1!1.32!231.85!FLI1;;chr1:23857698..23857733,-!p1@E2F2!1.32!35.89!E2F2;;chr1:23857128..23857141,-!p6@E2F2!1.32!19.94!E2F2;;chr7:149470641..149470694,-!p1@ZNF467!1.31!86.02!ZNF467;;chr2:192015701..192015743,-!p1@STAT4!1.31!26.77!STAT4;;chr2:100759010..100759035,-!p1@AFF3!1.31!19.37!AFF3;;chr1:47697881..47697910,-!p4@TAL1!1.31!19.37!TAL1;;chr7:50344251..50344288,+!p3@IKZF1!1.27!17.66!IKZF1;;chr2:70142189..70142223,+!p2@MXD1!1.26!120.77!MXD1;;chr20:56195525..56195556,-!p2@ZBP1!1.26!17.09!ZBP1;;chr16:3313791..3313834,+!p2@ZNF263!1.25!36.46!ZNF263;;chr10:8096631..8096660,+!p1@GATA3!1.25!20.51!GATA3;;chr4:185395633..185395651,-!p2@IRF2!1.24!26.20!IRF2;;chr1:43148792..43148849,+!p2@YBX1!1.23!59.81!YBX1;;chrX:107018836..107018862,-!p8@TSC22D3!1.23!15.95!TSC22D3;;chr11:111249993..111250006,-!p1@POU2AF1!1.21!15.38!POU2AF1;;chr6:91006518..91006570,-!p1@BACH2!1.20!33.61!BACH2;;chr1:8484007..8484061,-!p13@RERE!1.20!18.80!RERE;;chr10:111985777..111985788,+!p4@MXI1!1.20!14.81!MXI1;;chr5:131826457..131826514,-!p1@IRF1!1.19!554.27!IRF1;;chr12:53835425..53835437,+!p4@PRR13,p5@PCBP2!1.19!23.93!PCBP2;;chr3:71355163..71355209,-!p5@FOXP1!1.19!19.94!FOXP1;;chr14:75988771..75988826,+!p1@BATF!1.18!18.80!BATF;;chr12:10854595..10854628,-!p7@CSDA!1.17!19.37!CSDA;;chr17:37934365..37934387,-!p2@IKZF3!1.17!13.67!IKZF3;;chr2:231090471..231090504,+!p2@SP140!1.17!13.67!SP140;;chr17:38498402..38498445,+!p3@RARA!1.16!48.42!RARA;;chr17:38498594..38498661,+!p2@RARA!1.16!44.43!RARA;;chr3:71632840..71632857,-!p10@FOXP1!1.16!26.77!FOXP1;;chrX:107019163..107019179,-!p7@TSC22D3!1.16!15.38!TSC22D3;;chr19:42636586..42636607,-!p1@POU2F2!1.15!35.89!POU2F2;;chr16:88752889..88752921,-!p1@SNAI3!1.15!15.38!SNAI3;;chr17:38497662..38497713,+!p4@RARA!1.15!15.38!RARA;;chr12:54694738..54694749,-!p5@NFE2!1.15!13.10!NFE2;;chr3:18486354..18486377,-!p2@SATB1!1.14!15.95!SATB1;;chr10:51565239..51565263,+!p2@NCOA4!1.13!286.53!NCOA4;;chr21:36421535..36421610,-!p2@RUNX1!1.13!44.43!RUNX1;;chr2:113057415..113057477,+!p3@ZC3H6!1.12!15.95!ZC3H6;;chr7:149470540..149470596,-!p2@ZNF467!1.12!15.95!ZNF467;;chr7:115670804..115670825,-!p1@TFEC!1.11!11.96!TFEC;;chr7:149470297..149470337,-!p3@ZNF467!1.11!11.96!ZNF467;;chr21:34442540..34442560,+!p2@OLIG1!1.11!11.96!OLIG1;;chrX:107018969..107019024,-!p6@TSC22D3!1.10!15.95!TSC22D3;;chr13:41593425..41593480,-!p1@ELF1!1.09!71.78!ELF1;;chr4:185395191..185395226,-!p4@IRF2!1.09!15.95!IRF2;;chrX:131574281..131574293,-!p18@MBNL3!1.09!11.39!MBNL3;;chr7:50343895..50343936,+!p5@IKZF1!1.09!11.39!IKZF1;;chr1:47695003..47695042,-!p2@TAL1!1.09!11.39!TAL1;;chr10:31288398..31288455,-!p2@ZNF438!1.07!12.53!ZNF438;;chr12:54691711..54691725,-!p7@NFE2!1.07!10.82!NFE2;;chr12:54694686..54694697,-!p8@NFE2!1.07!10.82!NFE2;;chr4:109090075..109090095,-!p2@LEF1!1.07!10.82!LEF1;;chr7:128577972..128578047,+!p1@IRF5!1.06!16.52!IRF5;;chr4:106068026..106068084,+!p1@TET2!1.05!93.42!TET2;;chr6:106546808..106546833,+!p3@PRDM1!1.05!13.10!PRDM1;;chrX:131540376..131540407,-!p14@MBNL3!1.05!10.25!MBNL3;;chr2:100759037..100759058,-!p2@AFF3!1.05!10.25!AFF3;;chr9:137217986..137218049,+!p3@RXRA!1.04!29.05!RXRA;;chr1:221052776..221052799,+!p1@HLX!1.04!18.23!HLX;;chr19:56146352..56146420,+!p2@ZNF580,p2@ZNF581!1.03!64.37!ZNF580;;chr19:19779619..19779670,+!p1@ZNF101!1.02!27.34!ZNF101;;chr9:32550965..32551031,-!p4@TOPORS!1.02!14.81!TOPORS;;chr12:10865870..10865888,-!p6@CSDA!1.02!13.10!CSDA;;chr2:231084659..231084721,-!p1@SP110!1.01!218.74!SP110;;chr2:208031542..208031595,-!p2@KLF7!1.01!67.22!KLF7;;chr6:108880956..108881011,+!p1@FOXO3!1.00!60.95!FOXO3;;chr6:108882109..108882173,+!p2@FOXO3!1.00!50.13!FOXO3;;chr10:94449703..94449718,+!p1@HHEX!1.00!35.32!HHEX;;chr1:47691303..47691319,-!p5@TAL1!1.00!9.11!TAL1;;chr2:192015750..192015793,-!p2@STAT4!0.99!11.96!STAT4;;chr4:185395590..185395627,-!p3@IRF2!0.99!10.82!IRF2;;chr11:128392273..128392308,-!p2@ETS1!0.98!37.60!ETS1;;chr17:38020392..38020477,-!p1@IKZF3!0.98!8.54!IKZF3;;chr17:38020557..38020572,-!p4@IKZF3!0.98!8.54!IKZF3;;chr19:10416315..10416333,-!p1@ZGLP1!0.98!8.54!ZGLP1;;chr19:13213954..13214021,-!p4@LYL1!0.98!8.54!LYL1;;chr11:130184753..130184824,-!p1@ZBTB44!0.97!117.92!ZBTB44;;chr2:208394817..208394834,+!p3@CREB1!0.97!34.75!CREB1;;chr2:60780607..60780624,-!p2@BCL11A!0.97!26.20!BCL11A;;chr4:140098339..140098392,-!p1@ELF2!0.96!68.93!ELF2;;chr10:8096772..8096787,+!p2@GATA3!0.96!9.68!GATA3;;chr10:94449675..94449694,+!p2@HHEX!0.95!21.65!HHEX;;chr11:16403910..16403933,-!p12@SOX6!0.95!7.98!SOX6;;chr8:71316021..71316068,-!p1@NCOA2!0.94!74.62!NCOA2;;chr5:172483347..172483407,+!p1@C5orf41!0.93!59.24!CREBRF;;chr9:117160738..117160782,-!p2@AKNA!0.93!32.47!AKNA;;chr12:57919293..57919311,+!p3@MBD6!0.93!21.08!MBD6;;chr19:56879534..56879615,+!p3@ZNF542!0.93!11.96!ZNF542;;chr2:145277640..145277771,-!p1@ZEB2!0.92!103.11!ZEB2;;chr16:29817231..29817290,+!p10@MAZ!0.92!22.22!MAZ;;chr1:25256439..25256476,-!p3@RUNX3!0.92!7.41!RUNX3;;chr12:10854646..10854658,-!p24@CSDA!0.92!7.41!CSDA;;chr12:54691726..54691738,-!p9@NFE2!0.92!7.41!NFE2;;chr1:156470515..156470542,-!p2@MEF2D!0.91!38.74!MEF2D;;chr8:123793959..123793977,+!p4@ZHX2!0.91!14.24!ZHX2;;chr6:15245677..15245723,+!p6@JARID2!0.91!10.82!JARID2;;chr9:117150303..117150312,-!p3@AKNA!0.91!9.11!AKNA;;chr4:38665769..38665801,+!p2@KLF3!0.90!66.08!KLF3;;chr19:33793430..33793447,-!p1@CEBPA!0.90!30.76!CEBPA;;chr3:71632864..71632885,-!p4@FOXP1!0.90!24.49!FOXP1;;chrX:106960221..106960236,-!p3@TSC22D3!0.90!19.94!TSC22D3;;chr12:10875658..10875708,-!p2@CSDA!0.90!16.52!CSDA;;chr1:156470494..156470505,-!p3@MEF2D!0.90!10.25!MEF2D;;chr9:88969339..88969422,-!p2@ZCCHC6!0.89!55.26!ZCCHC6;;chr5:88178983..88179012,-!p1@MEF2C!0.89!55.26!MEF2C;;chr7:137620650..137620677,-!p3@CREB3L2!0.89!6.84!CREB3L2;;chr17:79881409..79881423,-!p8@MAFG!0.89!6.84!MAFG;;chr2:113057501..113057529,+!p4@ZC3H6!0.89!6.84!ZC3H6;;chrX:48644976..48644983,+!p2@GATA1!0.89!6.84!GATA1;;chr9:37034186..37034216,-!p2@PAX5!0.89!6.84!PAX5;;chr17:40440481..40440550,+!p1@STAT5A!0.88!50.13!STAT5A;;chr16:1464688..1464728,-!p1@UNKL!0.88!47.85!UNKL;;chr15:60884706..60884743,-!p1@RORA!0.87!35.32!RORA;;chr4:106155658..106155662,+!p5@TET2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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000178;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation3.CNhs11948.12181-129A3.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation3.CNhs11948.12181-129A3.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation3.CNhs11948.12181-129A3.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation3.CNhs11948.12181-129A3.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090309%252c%2520donation3.CNhs11948.12181-129A3.hg38.nobarcode.ctss.bed.gz
 |id=FF:12181-129A3
-|is_a=EFO:0002091;;FF:0000002;;FF:0000210;;FF:0000281
+|is_a=EFO:0002091;;FF:0000002;;FF:0000281
+|is_obsolete=
+|library_id=CNhs11948!RDhi10002
+|library_id_phase_based=2:CNhs11948
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12181
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12181
 |name=Whole blood (ribopure), donor090309, donation3
 |namespace=FANTOM5
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11948,LSID836,release011,COMPLETED
-|profile_rnaseq=RDhi10002,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=129
 |rna_catalog_number=
@@ Line 57: / Line 78: @@
 |rna_weight_ug=14.1
 |sample_age=
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 91: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.36433523492612e-245!GO:0043227;membrane-bound organelle;4.45968738552051e-129!GO:0005737;cytoplasm;4.45968738552051e-129!GO:0043231;intracellular membrane-bound organelle;6.11101239818894e-129!GO:0043226;organelle;2.11342967361799e-125!GO:0043229;intracellular organelle;9.2985553328764e-125!GO:0044444;cytoplasmic part;1.23322585834908e-81!GO:0044422;organelle part;5.02551910169905e-71!GO:0044446;intracellular organelle part;1.08856508117667e-69!GO:0043170;macromolecule metabolic process;6.51408915941411e-65!GO:0044237;cellular metabolic process;9.67149050044855e-65!GO:0005515;protein binding;4.34663704706077e-64!GO:0044238;primary metabolic process;1.72986538102209e-63!GO:0032991;macromolecular complex;3.73151113916571e-63!GO:0005634;nucleus;8.85539089074938e-60!GO:0003723;RNA binding;2.44166885454317e-48!GO:0044428;nuclear part;1.80666822942831e-47!GO:0030529;ribonucleoprotein complex;2.15958433639032e-45!GO:0019538;protein metabolic process;1.55946710324845e-44!GO:0033036;macromolecule localization;8.16867786983616e-42!GO:0015031;protein transport;1.30050416131278e-41!GO:0044267;cellular protein metabolic process;7.94949764791519e-41!GO:0044260;cellular macromolecule metabolic process;7.94949764791519e-41!GO:0045184;establishment of protein localization;1.58315818160169e-40!GO:0043283;biopolymer metabolic process;2.91990821107279e-39!GO:0008104;protein localization;3.87883085227196e-39!GO:0043233;organelle lumen;2.1389065372916e-38!GO:0031974;membrane-enclosed lumen;2.1389065372916e-38!GO:0005829;cytosol;1.11503042644546e-34!GO:0043234;protein complex;1.15052329884543e-34!GO:0006412;translation;2.67777413790785e-34!GO:0010467;gene expression;3.69547678293074e-33!GO:0016071;mRNA metabolic process;3.25703689128723e-30!GO:0031981;nuclear lumen;7.79468041102176e-30!GO:0006396;RNA processing;1.86949854860621e-29!GO:0031090;organelle membrane;2.63047282557652e-29!GO:0005739;mitochondrion;3.20842362589426e-28!GO:0016043;cellular component organization and biogenesis;1.34363647212417e-27!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.34680858251321e-27!GO:0008380;RNA splicing;3.96185451357516e-26!GO:0046907;intracellular transport;7.90048729701145e-26!GO:0009059;macromolecule biosynthetic process;8.23709864217056e-26!GO:0012501;programmed cell death;1.97531586280576e-25!GO:0006915;apoptosis;1.97531586280576e-25!GO:0006397;mRNA processing;4.50110018356219e-25!GO:0006886;intracellular protein transport;8.1499225822149e-25!GO:0008219;cell death;2.12446205635364e-24!GO:0016265;death;2.12446205635364e-24!GO:0005840;ribosome;2.42989504673035e-24!GO:0031967;organelle envelope;1.55952344017821e-23!GO:0031975;envelope;2.26082294868999e-23!GO:0065003;macromolecular complex assembly;2.62321098459804e-22!GO:0044445;cytosolic part;3.00429719285888e-22!GO:0009058;biosynthetic process;1.04141859504472e-21!GO:0003735;structural constituent of ribosome;1.06408032051695e-21!GO:0044249;cellular biosynthetic process;1.37544719461226e-21!GO:0005654;nucleoplasm;5.1523739257809e-21!GO:0051649;establishment of cellular localization;1.09315466803714e-20!GO:0051641;cellular localization;1.74195845104277e-20!GO:0043412;biopolymer modification;3.00096493620883e-20!GO:0033279;ribosomal subunit;3.05740751458509e-20!GO:0044429;mitochondrial part;5.31044507010797e-20!GO:0022607;cellular component assembly;8.26708214637394e-20!GO:0000166;nucleotide binding;1.10824941722886e-19!GO:0008134;transcription factor binding;1.90188259046416e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.1393522973367e-19!GO:0006464;protein modification process;1.2551527231821e-18!GO:0005681;spliceosome;1.82380220634158e-18!GO:0006512;ubiquitin cycle;2.37071219067282e-18!GO:0042981;regulation of apoptosis;2.98324090910497e-18!GO:0043067;regulation of programmed cell death;5.40741321612757e-18!GO:0002376;immune system process;1.87350309205848e-17!GO:0044451;nucleoplasm part;3.26642615251341e-17!GO:0043687;post-translational protein modification;5.45736248982975e-17!GO:0044265;cellular macromolecule catabolic process;2.95779242896505e-16!GO:0016192;vesicle-mediated transport;3.36624963887953e-16!GO:0006996;organelle organization and biogenesis;5.19596728576893e-16!GO:0016070;RNA metabolic process;5.67574103250819e-16!GO:0003676;nucleic acid binding;6.19509865949394e-16!GO:0016462;pyrophosphatase activity;3.5888208206696e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.5888208206696e-15!GO:0032553;ribonucleotide binding;4.13137249969432e-15!GO:0032555;purine ribonucleotide binding;4.13137249969432e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;4.27866013681022e-15!GO:0006119;oxidative phosphorylation;4.64057137056025e-15!GO:0005740;mitochondrial envelope;5.94852672663853e-15!GO:0007243;protein kinase cascade;6.68908826967585e-15!GO:0017111;nucleoside-triphosphatase activity;1.04086796031873e-14!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.33236242269818e-14!GO:0031966;mitochondrial membrane;2.51856450315815e-14!GO:0007242;intracellular signaling cascade;2.87332833267059e-14!GO:0017076;purine nucleotide binding;3.3822594970284e-14!GO:0006259;DNA metabolic process;3.57399891297393e-14!GO:0016874;ligase activity;3.84929400276704e-14!GO:0019866;organelle inner membrane;1.18882289360419e-13!GO:0050794;regulation of cellular process;1.36652222499401e-13!GO:0016604;nuclear body;1.5580951970569e-13!GO:0019941;modification-dependent protein catabolic process;4.911409561585e-13!GO:0043632;modification-dependent macromolecule catabolic process;4.911409561585e-13!GO:0006793;phosphorus metabolic process;5.02302700146182e-13!GO:0006796;phosphate metabolic process;5.02302700146182e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;5.46053356922601e-13!GO:0006913;nucleocytoplasmic transport;5.89342885555881e-13!GO:0006605;protein targeting;7.38077581387714e-13!GO:0006511;ubiquitin-dependent protein catabolic process;7.51439067156381e-13!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.06384660173798e-12!GO:0051169;nuclear transport;1.12506248135323e-12!GO:0048770;pigment granule;1.15057779238737e-12!GO:0042470;melanosome;1.15057779238737e-12!GO:0044257;cellular protein catabolic process;1.32566124415549e-12!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.01527195567604e-12!GO:0043285;biopolymer catabolic process;2.39629903445068e-12!GO:0022618;protein-RNA complex assembly;2.59648091049249e-12!GO:0005794;Golgi apparatus;3.48235556516954e-12!GO:0009057;macromolecule catabolic process;4.04854043010612e-12!GO:0003712;transcription cofactor activity;4.31629508712707e-12!GO:0016310;phosphorylation;4.9383857469541e-12!GO:0005743;mitochondrial inner membrane;5.77080206156434e-12!GO:0006955;immune response;7.40475153246557e-12!GO:0005768;endosome;1.03097225802486e-11!GO:0051246;regulation of protein metabolic process;1.58104700086312e-11!GO:0016607;nuclear speck;1.95009978003297e-11!GO:0012505;endomembrane system;2.20186757983186e-11!GO:0044248;cellular catabolic process;5.14617414738781e-11!GO:0005524;ATP binding;8.21670170652234e-11!GO:0043069;negative regulation of programmed cell death;8.52164675401734e-11!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.942760345619e-11!GO:0032559;adenyl ribonucleotide binding;1.0690874537905e-10!GO:0015934;large ribosomal subunit;1.27966640353925e-10!GO:0043066;negative regulation of apoptosis;1.28731356022268e-10!GO:0015935;small ribosomal subunit;1.62048930206283e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;1.64989824129054e-10!GO:0043228;non-membrane-bound organelle;1.83837268093276e-10!GO:0043232;intracellular non-membrane-bound organelle;1.83837268093276e-10!GO:0050789;regulation of biological process;2.46740786794326e-10!GO:0048523;negative regulation of cellular process;2.97550735153384e-10!GO:0006916;anti-apoptosis;3.33920862323555e-10!GO:0044455;mitochondrial membrane part;3.54903666068078e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.68764423003363e-10!GO:0008639;small protein conjugating enzyme activity;5.21641565721003e-10!GO:0019787;small conjugating protein ligase activity;6.69430339296895e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.82333601640705e-10!GO:0008135;translation factor activity, nucleic acid binding;7.25287981870698e-10!GO:0005773;vacuole;8.1613813709365e-10!GO:0030554;adenyl nucleotide binding;8.58584259737904e-10!GO:0006323;DNA packaging;8.81935549159707e-10!GO:0004842;ubiquitin-protein ligase activity;1.26407153532184e-09!GO:0005635;nuclear envelope;1.31654793355515e-09!GO:0051186;cofactor metabolic process;1.32894189547133e-09!GO:0005746;mitochondrial respiratory chain;1.84210609009409e-09!GO:0000502;proteasome complex (sensu Eukaryota);1.87022639962112e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;2.02206756398307e-09!GO:0000375;RNA splicing, via transesterification reactions;2.02206756398307e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.02206756398307e-09!GO:0006457;protein folding;2.25134930439274e-09!GO:0048193;Golgi vesicle transport;2.87233813268807e-09!GO:0006366;transcription from RNA polymerase II promoter;3.03655364841547e-09!GO:0065009;regulation of a molecular function;3.0442989188101e-09!GO:0030163;protein catabolic process;4.53990067379947e-09!GO:0007264;small GTPase mediated signal transduction;7.73607577147694e-09!GO:0016568;chromatin modification;9.01008154060168e-09!GO:0000323;lytic vacuole;9.22022488222692e-09!GO:0005764;lysosome;9.22022488222692e-09!GO:0017038;protein import;9.37990139753968e-09!GO:0050136;NADH dehydrogenase (quinone) activity;1.00891560242926e-08!GO:0003954;NADH dehydrogenase activity;1.00891560242926e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.00891560242926e-08!GO:0065007;biological regulation;1.07712203293776e-08!GO:0019222;regulation of metabolic process;1.11485146154555e-08!GO:0048519;negative regulation of biological process;1.28761310664652e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.64071350943188e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.1294346490733e-08!GO:0043065;positive regulation of apoptosis;3.27899770664326e-08!GO:0003713;transcription coactivator activity;3.43504479447401e-08!GO:0005730;nucleolus;4.2370736778167e-08!GO:0005770;late endosome;4.27173710316697e-08!GO:0043068;positive regulation of programmed cell death;5.29753155115389e-08!GO:0019829;cation-transporting ATPase activity;5.34248771798683e-08!GO:0016881;acid-amino acid ligase activity;5.39307372414323e-08!GO:0019899;enzyme binding;5.56351036358268e-08!GO:0003924;GTPase activity;6.82224946437027e-08!GO:0006446;regulation of translational initiation;6.86788620309585e-08!GO:0003743;translation initiation factor activity;7.48320864060269e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.89526390200649e-08!GO:0031965;nuclear membrane;8.64368103516115e-08!GO:0051276;chromosome organization and biogenesis;9.51097139269345e-08!GO:0042775;organelle ATP synthesis coupled electron transport;1.0304272516879e-07!GO:0042773;ATP synthesis coupled electron transport;1.0304272516879e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.04013323395118e-07!GO:0016887;ATPase activity;1.08454979462904e-07!GO:0006917;induction of apoptosis;1.28934323253351e-07!GO:0051170;nuclear import;1.2934247368326e-07!GO:0044440;endosomal part;1.48945823923711e-07!GO:0010008;endosome membrane;1.48945823923711e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.50781921768264e-07!GO:0006606;protein import into nucleus;1.73714257669212e-07!GO:0030964;NADH dehydrogenase complex (quinone);2.00400705512071e-07!GO:0045271;respiratory chain complex I;2.00400705512071e-07!GO:0005747;mitochondrial respiratory chain complex I;2.00400705512071e-07!GO:0006413;translational initiation;2.01856379537949e-07!GO:0009150;purine ribonucleotide metabolic process;2.06058886512909e-07!GO:0012502;induction of programmed cell death;2.17017961790447e-07!GO:0031980;mitochondrial lumen;2.17017961790447e-07!GO:0005759;mitochondrial matrix;2.17017961790447e-07!GO:0009259;ribonucleotide metabolic process;2.33059432902245e-07!GO:0042623;ATPase activity, coupled;2.62913321556596e-07!GO:0045321;leukocyte activation;2.73750719985337e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.25525860554822e-07!GO:0005525;GTP binding;3.27525327671067e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.03706433352091e-07!GO:0006163;purine nucleotide metabolic process;5.02655490426666e-07!GO:0060090;molecular adaptor activity;5.03003902141926e-07!GO:0016787;hydrolase activity;5.25771180521452e-07!GO:0009615;response to virus;5.42093510108165e-07!GO:0006461;protein complex assembly;5.47597498606209e-07!GO:0006950;response to stress;5.60870803707256e-07!GO:0015986;ATP synthesis coupled proton transport;5.70784547584664e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.70784547584664e-07!GO:0009152;purine ribonucleotide biosynthetic process;6.33937260462474e-07!GO:0032446;protein modification by small protein conjugation;6.42613847109345e-07!GO:0006417;regulation of translation;7.10459859041633e-07!GO:0009967;positive regulation of signal transduction;7.12218371119568e-07!GO:0051082;unfolded protein binding;1.03351546238138e-06!GO:0016567;protein ubiquitination;1.11258655232469e-06!GO:0001775;cell activation;1.33803512741839e-06!GO:0006732;coenzyme metabolic process;1.51173253136953e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.54404806180858e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.54404806180858e-06!GO:0006164;purine nucleotide biosynthetic process;1.61712937737596e-06!GO:0009260;ribonucleotide biosynthetic process;2.06297906561258e-06!GO:0009199;ribonucleoside triphosphate metabolic process;2.06408376553983e-06!GO:0044453;nuclear membrane part;2.21182178374632e-06!GO:0016564;transcription repressor activity;2.21309500532517e-06!GO:0005774;vacuolar membrane;2.2866958684665e-06!GO:0046034;ATP metabolic process;2.3149951960098e-06!GO:0005783;endoplasmic reticulum;2.3183867376098e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.3183867376098e-06!GO:0007265;Ras protein signal transduction;2.54022381910442e-06!GO:0046649;lymphocyte activation;2.58375396562787e-06!GO:0031323;regulation of cellular metabolic process;2.58375396562787e-06!GO:0002764;immune response-regulating signal transduction;2.59046747625682e-06!GO:0008565;protein transporter activity;2.66091827997578e-06!GO:0008632;apoptotic program;2.98412298228168e-06!GO:0016563;transcription activator activity;3.18255868149372e-06!GO:0050790;regulation of catalytic activity;3.20625732988163e-06!GO:0032561;guanyl ribonucleotide binding;3.46194043771827e-06!GO:0019001;guanyl nucleotide binding;3.46194043771827e-06!GO:0048522;positive regulation of cellular process;3.46667142925009e-06!GO:0007049;cell cycle;3.59800529395532e-06!GO:0050657;nucleic acid transport;3.8838546310607e-06!GO:0051236;establishment of RNA localization;3.8838546310607e-06!GO:0050658;RNA transport;3.8838546310607e-06!GO:0015078;hydrogen ion transmembrane transporter activity;3.89316531881147e-06!GO:0030097;hemopoiesis;3.91583227024831e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.0292747211337e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.0292747211337e-06!GO:0009141;nucleoside triphosphate metabolic process;4.13247219652429e-06!GO:0006754;ATP biosynthetic process;4.79238238252005e-06!GO:0006753;nucleoside phosphate metabolic process;4.79238238252005e-06!GO:0006403;RNA localization;4.81781198098271e-06!GO:0008047;enzyme activator activity;4.90940738389841e-06!GO:0002757;immune response-activating signal transduction;5.32692664294333e-06!GO:0009142;nucleoside triphosphate biosynthetic process;5.47644933483122e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.47644933483122e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.86374709866366e-06!GO:0006333;chromatin assembly or disassembly;5.9097557813694e-06!GO:0031326;regulation of cellular biosynthetic process;5.92099321781369e-06!GO:0009056;catabolic process;6.01516270949457e-06!GO:0043566;structure-specific DNA binding;6.27546767835217e-06!GO:0005765;lysosomal membrane;7.8735984902756e-06!GO:0001772;immunological synapse;8.44863235181483e-06!GO:0030695;GTPase regulator activity;8.46965840999718e-06!GO:0044437;vacuolar part;9.92674845774961e-06!GO:0002768;immune response-regulating cell surface receptor signaling pathway;1.06942015533676e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.08329057583814e-05!GO:0000151;ubiquitin ligase complex;1.09680187941456e-05!GO:0051188;cofactor biosynthetic process;1.19160878420901e-05!GO:0005793;ER-Golgi intermediate compartment;1.28752698297046e-05!GO:0048518;positive regulation of biological process;1.39307318574252e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.43249077212891e-05!GO:0030218;erythrocyte differentiation;1.47251877525485e-05!GO:0031324;negative regulation of cellular metabolic process;1.53633942783869e-05!GO:0006974;response to DNA damage stimulus;1.57266597547099e-05!GO:0009966;regulation of signal transduction;1.62921307846685e-05!GO:0004674;protein serine/threonine kinase activity;2.01820823361235e-05!GO:0065004;protein-DNA complex assembly;2.22102593113422e-05!GO:0002429;immune response-activating cell surface receptor signaling pathway;2.23719849183191e-05!GO:0045786;negative regulation of progression through cell cycle;2.28228497966471e-05!GO:0044431;Golgi apparatus part;2.2950507403697e-05!GO:0003697;single-stranded DNA binding;2.29677504334392e-05!GO:0009889;regulation of biosynthetic process;2.44359244724522e-05!GO:0031902;late endosome membrane;2.44373391988678e-05!GO:0016197;endosome transport;2.45623287503332e-05!GO:0009892;negative regulation of metabolic process;2.71290637989259e-05!GO:0005070;SH3/SH2 adaptor activity;2.95395732024665e-05!GO:0005643;nuclear pore;3.0219325709259e-05!GO:0048475;coated membrane;3.08606389322813e-05!GO:0030117;membrane coat;3.08606389322813e-05!GO:0051028;mRNA transport;3.18721545326767e-05!GO:0031982;vesicle;3.23663276629767e-05!GO:0016740;transferase activity;3.39352004768706e-05!GO:0051726;regulation of cell cycle;3.50683355327622e-05!GO:0000785;chromatin;3.792273332093e-05!GO:0042110;T cell activation;3.792273332093e-05!GO:0002520;immune system development;3.88232098170903e-05!GO:0000074;regulation of progression through cell cycle;4.03742480315103e-05!GO:0004386;helicase activity;4.44428739815135e-05!GO:0030099;myeloid cell differentiation;4.75163255499068e-05!GO:0006401;RNA catabolic process;4.77252447479092e-05!GO:0030120;vesicle coat;4.77252447479092e-05!GO:0030662;coated vesicle membrane;4.77252447479092e-05!GO:0016044;membrane organization and biogenesis;5.08757879938032e-05!GO:0010468;regulation of gene expression;5.80693684063864e-05!GO:0008026;ATP-dependent helicase activity;5.91061849122178e-05!GO:0051336;regulation of hydrolase activity;6.60773238213166e-05!GO:0009117;nucleotide metabolic process;7.53059948539831e-05!GO:0000245;spliceosome assembly;8.01280101370232e-05!GO:0031252;leading edge;8.27910486941749e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;8.78256735909977e-05!GO:0044432;endoplasmic reticulum part;9.58660997018144e-05!GO:0045259;proton-transporting ATP synthase complex;9.69059130721925e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.77569551966511e-05!GO:0051168;nuclear export;9.79103429247247e-05!GO:0016481;negative regulation of transcription;9.81729671921433e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000110451582142234!GO:0015399;primary active transmembrane transporter activity;0.000110451582142234!GO:0003714;transcription corepressor activity;0.000111004972733985!GO:0009060;aerobic respiration;0.000123387879542301!GO:0004298;threonine endopeptidase activity;0.000125329587857595!GO:0005083;small GTPase regulator activity;0.000131906025010451!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000143425930969588!GO:0031410;cytoplasmic vesicle;0.000147310345705088!GO:0051251;positive regulation of lymphocyte activation;0.000147488495416185!GO:0009055;electron carrier activity;0.000150754027766548!GO:0005096;GTPase activator activity;0.000152768768891852!GO:0030532;small nuclear ribonucleoprotein complex;0.00015558355986528!GO:0065002;intracellular protein transport across a membrane;0.000163389096551363!GO:0008270;zinc ion binding;0.000166000938851815!GO:0046930;pore complex;0.000168182972272019!GO:0006752;group transfer coenzyme metabolic process;0.000172319246827305!GO:0032940;secretion by cell;0.00018760385340751!GO:0006888;ER to Golgi vesicle-mediated transport;0.000189222300536104!GO:0006350;transcription;0.000195213605684486!GO:0048468;cell development;0.000206342317675851!GO:0031988;membrane-bound vesicle;0.000209597492242144!GO:0006402;mRNA catabolic process;0.000209597492242144!GO:0005057;receptor signaling protein activity;0.000211177285673062!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000211916383257406!GO:0005885;Arp2/3 protein complex;0.000214732736924438!GO:0006613;cotranslational protein targeting to membrane;0.000214732736924438!GO:0043492;ATPase activity, coupled to movement of substances;0.000214732736924438!GO:0048534;hemopoietic or lymphoid organ development;0.000223972274892679!GO:0005769;early endosome;0.000226261883818253!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000229861952830696!GO:0018193;peptidyl-amino acid modification;0.000264021184981199!GO:0016301;kinase activity;0.000312074031934087!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000326367107415588!GO:0006281;DNA repair;0.000349242654468448!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.000383469763193481!GO:0046914;transition metal ion binding;0.000383469763193481!GO:0050851;antigen receptor-mediated signaling pathway;0.000383850055668849!GO:0009607;response to biotic stimulus;0.000385050876063184!GO:0003724;RNA helicase activity;0.000409596091045327!GO:0042101;T cell receptor complex;0.000409968180978024!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000413425053875931!GO:0005761;mitochondrial ribosome;0.000414289669028319!GO:0000313;organellar ribosome;0.000414289669028319!GO:0000139;Golgi membrane;0.00041768588831501!GO:0009108;coenzyme biosynthetic process;0.000431658481060481!GO:0005694;chromosome;0.000431658481060481!GO:0001816;cytokine production;0.000444548176925347!GO:0016023;cytoplasmic membrane-bound vesicle;0.000476800778910712!GO:0006468;protein amino acid phosphorylation;0.000480890169396568!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000557766955998926!GO:0051427;hormone receptor binding;0.000557766955998926!GO:0005798;Golgi-associated vesicle;0.000559496436766368!GO:0044427;chromosomal part;0.000576171224246341!GO:0042254;ribosome biogenesis and assembly;0.000576171224246341!GO:0005789;endoplasmic reticulum membrane;0.000583002889488014!GO:0030036;actin cytoskeleton organization and biogenesis;0.000601876222120015!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000620720842442984!GO:0045045;secretory pathway;0.000773227979109234!GO:0045333;cellular respiration;0.000837471229076136!GO:0006650;glycerophospholipid metabolic process;0.0008943023071281!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00094265712426208!GO:0035257;nuclear hormone receptor binding;0.000973829463418476!GO:0006919;caspase activation;0.00103899813099303!GO:0046822;regulation of nucleocytoplasmic transport;0.00115654998012918!GO:0008624;induction of apoptosis by extracellular signals;0.00121832952049153!GO:0031497;chromatin assembly;0.00134763722420024!GO:0042113;B cell activation;0.00135571536783198!GO:0008654;phospholipid biosynthetic process;0.00136802796268289!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00136802796268289!GO:0016779;nucleotidyltransferase activity;0.00142119538375953!GO:0022402;cell cycle process;0.00158081533517859!GO:0030041;actin filament polymerization;0.00160301143767236!GO:0006334;nucleosome assembly;0.00177322513910357!GO:0006099;tricarboxylic acid cycle;0.00182442526757169!GO:0046356;acetyl-CoA catabolic process;0.00182442526757169!GO:0007034;vacuolar transport;0.0019006180706855!GO:0019904;protein domain specific binding;0.00190786533730527!GO:0006818;hydrogen transport;0.00205091467831023!GO:0015992;proton transport;0.00210824892304007!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.00212151212526537!GO:0016363;nuclear matrix;0.00230793466318793!GO:0043281;regulation of caspase activity;0.00235189207013949!GO:0006612;protein targeting to membrane;0.00238675121640576!GO:0001726;ruffle;0.00240914139510741!GO:0007050;cell cycle arrest;0.0024279091107846!GO:0043087;regulation of GTPase activity;0.00247816253068208!GO:0006611;protein export from nucleus;0.0025706669941772!GO:0006897;endocytosis;0.00278911487534263!GO:0010324;membrane invagination;0.00278911487534263!GO:0030384;phosphoinositide metabolic process;0.00286602319773411!GO:0050865;regulation of cell activation;0.00286602319773411!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00297670817118168!GO:0004812;aminoacyl-tRNA ligase activity;0.00297670817118168!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00297670817118168!GO:0008154;actin polymerization and/or depolymerization;0.00311335470299778!GO:0022890;inorganic cation transmembrane transporter activity;0.00315116217438126!GO:0050870;positive regulation of T cell activation;0.00315992852049495!GO:0051249;regulation of lymphocyte activation;0.00318241233931933!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00329840794423277!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00330930131148799!GO:0004722;protein serine/threonine phosphatase activity;0.00331346405172737!GO:0008186;RNA-dependent ATPase activity;0.00333883565723074!GO:0031901;early endosome membrane;0.00337765795249044!GO:0006084;acetyl-CoA metabolic process;0.00339224859341408!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00339224859341408!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00351947519444541!GO:0002252;immune effector process;0.00365005389920152!GO:0043280;positive regulation of caspase activity;0.00367759271499174!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00372866396562104!GO:0003690;double-stranded DNA binding;0.00379966618993649!GO:0051223;regulation of protein transport;0.00383382616541824!GO:0003729;mRNA binding;0.00389036948442829!GO:0045449;regulation of transcription;0.00419113528574355!GO:0005741;mitochondrial outer membrane;0.0043826525152792!GO:0030029;actin filament-based process;0.004434485015693!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00456140516350637!GO:0008637;apoptotic mitochondrial changes;0.00461288335260447!GO:0006399;tRNA metabolic process;0.00488081775799809!GO:0051187;cofactor catabolic process;0.00490712113626395!GO:0043623;cellular protein complex assembly;0.0049093291725991!GO:0048250;mitochondrial iron ion transport;0.00493920034133142!GO:0005813;centrosome;0.00495293217746257!GO:0045892;negative regulation of transcription, DNA-dependent;0.00498578164272892!GO:0043038;amino acid activation;0.00500743329490306!GO:0006418;tRNA aminoacylation for protein translation;0.00500743329490306!GO:0043039;tRNA aminoacylation;0.00500743329490306!GO:0016072;rRNA metabolic process;0.00506198270275581!GO:0009719;response to endogenous stimulus;0.00513604983919744!GO:0002443;leukocyte mediated immunity;0.00518108608320146!GO:0006643;membrane lipid metabolic process;0.00519106061731641!GO:0051092;activation of NF-kappaB transcription factor;0.00525764426485564!GO:0050811;GABA receptor binding;0.00530793854679922!GO:0030867;rough endoplasmic reticulum membrane;0.0054344264090214!GO:0016505;apoptotic protease activator activity;0.0054344264090214!GO:0001819;positive regulation of cytokine production;0.0056130687650407!GO:0002521;leukocyte differentiation;0.00561966243892044!GO:0001817;regulation of cytokine production;0.00563094963805087!GO:0007041;lysosomal transport;0.00581643795492713!GO:0050871;positive regulation of B cell activation;0.00596493508995687!GO:0006891;intra-Golgi vesicle-mediated transport;0.00596493508995687!GO:0051707;response to other organism;0.00602362872941758!GO:0002274;myeloid leukocyte activation;0.00609349519743677!GO:0030118;clathrin coat;0.00622341922649604!GO:0006364;rRNA processing;0.00633379039146239!GO:0008234;cysteine-type peptidase activity;0.00657558731512562!GO:0030658;transport vesicle membrane;0.00663664602870842!GO:0048471;perinuclear region of cytoplasm;0.00664186227950139!GO:0045576;mast cell activation;0.00707609689950023!GO:0043021;ribonucleoprotein binding;0.0071337171027293!GO:0005637;nuclear inner membrane;0.00715580561905702!GO:0000287;magnesium ion binding;0.00727141935376662!GO:0030518;steroid hormone receptor signaling pathway;0.0072753194283926!GO:0033116;ER-Golgi intermediate compartment membrane;0.00768514236574946!GO:0009109;coenzyme catabolic process;0.0079444037268275!GO:0007005;mitochondrion organization and biogenesis;0.0079805159224321!GO:0032774;RNA biosynthetic process;0.00804755430394959!GO:0051252;regulation of RNA metabolic process;0.00811557197299589!GO:0051049;regulation of transport;0.00811557197299589!GO:0006351;transcription, DNA-dependent;0.00813217028221729!GO:0042802;identical protein binding;0.00825873056203648!GO:0046456;icosanoid biosynthetic process;0.00825873056203648!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00841153704794191!GO:0004004;ATP-dependent RNA helicase activity;0.00841153704794191!GO:0005099;Ras GTPase activator activity;0.0084712826794367!GO:0006968;cellular defense response;0.00858613100929861!GO:0051090;regulation of transcription factor activity;0.0086302412745402!GO:0043299;leukocyte degranulation;0.00866344332075868!GO:0042287;MHC protein binding;0.00894996002586192!GO:0022415;viral reproductive process;0.0090081595978399!GO:0045454;cell redox homeostasis;0.0092433724454401!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00951739322596169!GO:0031072;heat shock protein binding;0.00952085238346964!GO:0008287;protein serine/threonine phosphatase complex;0.0101588350993221!GO:0005667;transcription factor complex;0.0101727806386848!GO:0016791;phosphoric monoester hydrolase activity;0.0105477582472871!GO:0033157;regulation of intracellular protein transport;0.0105964224178571!GO:0042306;regulation of protein import into nucleus;0.0105964224178571!GO:0019867;outer membrane;0.010896823955135!GO:0030674;protein binding, bridging;0.0110064306118102!GO:0043300;regulation of leukocyte degranulation;0.0111498015721142!GO:0043506;regulation of JNK activity;0.0112406174342502!GO:0008656;caspase activator activity;0.0117532995870237!GO:0051338;regulation of transferase activity;0.0117907412750737!GO:0031968;organelle outer membrane;0.0119273944517716!GO:0005815;microtubule organizing center;0.0120225597028652!GO:0044262;cellular carbohydrate metabolic process;0.0120812591257751!GO:0051920;peroxiredoxin activity;0.0122025495670207!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0123332342067058!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0123332342067058!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0123332342067058!GO:0032318;regulation of Ras GTPase activity;0.0125666593893387!GO:0051050;positive regulation of transport;0.0127132827722191!GO:0050863;regulation of T cell activation;0.0128626647408036!GO:0019883;antigen processing and presentation of endogenous antigen;0.0129147318064493!GO:0030133;transport vesicle;0.0135293509184363!GO:0043028;caspase regulator activity;0.013686936129454!GO:0006914;autophagy;0.0140150455396155!GO:0051345;positive regulation of hydrolase activity;0.0142472562369996!GO:0008286;insulin receptor signaling pathway;0.0144331546552381!GO:0003725;double-stranded RNA binding;0.0148916615950737!GO:0005791;rough endoplasmic reticulum;0.0149094377019379!GO:0043085;positive regulation of catalytic activity;0.0149183170808466!GO:0043488;regulation of mRNA stability;0.0152124291500775!GO:0043487;regulation of RNA stability;0.0152124291500775!GO:0047485;protein N-terminus binding;0.0155336621419636!GO:0006595;polyamine metabolic process;0.0158801590163082!GO:0043549;regulation of kinase activity;0.0159076307839608!GO:0030660;Golgi-associated vesicle membrane;0.0159888736214622!GO:0004185;serine carboxypeptidase activity;0.0160389541272141!GO:0048487;beta-tubulin binding;0.0160580008092429!GO:0006672;ceramide metabolic process;0.0162152532776588!GO:0019955;cytokine binding;0.0164141353220977!GO:0030258;lipid modification;0.0164227362619446!GO:0016584;nucleosome positioning;0.016720152249843!GO:0045058;T cell selection;0.0169170562147715!GO:0042168;heme metabolic process;0.0170722207635577!GO:0048002;antigen processing and presentation of peptide antigen;0.0171107223863067!GO:0030521;androgen receptor signaling pathway;0.0175482615502339!GO:0019865;immunoglobulin binding;0.0176334845108996!GO:0046966;thyroid hormone receptor binding;0.0183859678114428!GO:0000118;histone deacetylase complex;0.0184698562690564!GO:0005521;lamin binding;0.0186678117170731!GO:0048821;erythrocyte development;0.018732385337338!GO:0006644;phospholipid metabolic process;0.0189370722843251!GO:0046474;glycerophospholipid biosynthetic process;0.0190058056342!GO:0001836;release of cytochrome c from mitochondria;0.0192244571761063!GO:0045653;negative regulation of megakaryocyte differentiation;0.0196511500211261!GO:0030119;AP-type membrane coat adaptor complex;0.0198495630514104!GO:0045309;protein phosphorylated amino acid binding;0.0198855143592732!GO:0042613;MHC class II protein complex;0.0199025043999719!GO:0006213;pyrimidine nucleoside metabolic process;0.0200901107307324!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0202328025821307!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0204747363911115!GO:0002819;regulation of adaptive immune response;0.0204747363911115!GO:0046578;regulation of Ras protein signal transduction;0.0206210790962258!GO:0031625;ubiquitin protein ligase binding;0.0208507886082245!GO:0051091;positive regulation of transcription factor activity;0.0208548340144333!GO:0006607;NLS-bearing substrate import into nucleus;0.0208548340144333!GO:0002444;myeloid leukocyte mediated immunity;0.0212608838388819!GO:0046519;sphingoid metabolic process;0.0214038898995991!GO:0030100;regulation of endocytosis;0.0214915728620681!GO:0006778;porphyrin metabolic process;0.0214915728620681!GO:0033013;tetrapyrrole metabolic process;0.0214915728620681!GO:0046467;membrane lipid biosynthetic process;0.0216531518343965!GO:0002448;mast cell mediated immunity;0.0217089332406212!GO:0043303;mast cell degranulation;0.0217089332406212!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0217187404522213!GO:0046983;protein dimerization activity;0.0221206820058175!GO:0050853;B cell receptor signaling pathway;0.0224888919982555!GO:0001516;prostaglandin biosynthetic process;0.0225736386949984!GO:0046457;prostanoid biosynthetic process;0.0225736386949984!GO:0051098;regulation of binding;0.0229272505700713!GO:0004672;protein kinase activity;0.0231150807893131!GO:0002440;production of molecular mediator of immune response;0.0237277614970447!GO:0045859;regulation of protein kinase activity;0.0238244826266878!GO:0009893;positive regulation of metabolic process;0.0239570477313871!GO:0002682;regulation of immune system process;0.0240004724264699!GO:0030522;intracellular receptor-mediated signaling pathway;0.0241204987948355!GO:0015923;mannosidase activity;0.0243419083276457!GO:0030131;clathrin adaptor complex;0.0243998211088071!GO:0050857;positive regulation of antigen receptor-mediated signaling pathway;0.0245846030623493!GO:0042990;regulation of transcription factor import into nucleus;0.0247151096087458!GO:0042991;transcription factor import into nucleus;0.0247151096087458!GO:0006783;heme biosynthetic process;0.0247544678360955!GO:0048500;signal recognition particle;0.0248457695240711!GO:0006740;NADPH regeneration;0.0248457695240711!GO:0006098;pentose-phosphate shunt;0.0248457695240711!GO:0045646;regulation of erythrocyte differentiation;0.025086430621623!GO:0007259;JAK-STAT cascade;0.0251861669450228!GO:0031294;lymphocyte costimulation;0.0253432292369209!GO:0031295;T cell costimulation;0.0253432292369209!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0253432292369209!GO:0006007;glucose catabolic process;0.0255789871432621!GO:0045113;regulation of integrin biosynthetic process;0.0255953784852279!GO:0045112;integrin biosynthetic process;0.0255953784852279!GO:0045637;regulation of myeloid cell differentiation;0.0260498063340691!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0262018043279511!GO:0006376;mRNA splice site selection;0.0264215660444626!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0264215660444626!GO:0008333;endosome to lysosome transport;0.0265438486963874!GO:0008629;induction of apoptosis by intracellular signals;0.0265950345029156!GO:0016251;general RNA polymerase II transcription factor activity;0.0271286504713013!GO:0015631;tubulin binding;0.0271607524607071!GO:0002218;activation of innate immune response;0.0271607524607071!GO:0002758;innate immune response-activating signal transduction;0.0271607524607071!GO:0004177;aminopeptidase activity;0.0275822534769725!GO:0050727;regulation of inflammatory response;0.0275865765731198!GO:0031347;regulation of defense response;0.0275865765731198!GO:0046979;TAP2 binding;0.0276161428140714!GO:0046977;TAP binding;0.0276161428140714!GO:0046978;TAP1 binding;0.0276161428140714!GO:0007040;lysosome organization and biogenesis;0.0276676475490348!GO:0045121;lipid raft;0.0277587257096472!GO:0030176;integral to endoplasmic reticulum membrane;0.0278434467015977!GO:0051881;regulation of mitochondrial membrane potential;0.0278434467015977!GO:0043304;regulation of mast cell degranulation;0.0281485951619755!GO:0043235;receptor complex;0.0285467985934092!GO:0006355;regulation of transcription, DNA-dependent;0.0286019448795874!GO:0030132;clathrin coat of coated pit;0.0289070295160599!GO:0035258;steroid hormone receptor binding;0.0291471883807199!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.029316141796885!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.029316141796885!GO:0051056;regulation of small GTPase mediated signal transduction;0.0295316454638762!GO:0002253;activation of immune response;0.0295573021954587!GO:0002467;germinal center formation;0.0299760413428507!GO:0006260;DNA replication;0.0300410316286057!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0300649729656668!GO:0046489;phosphoinositide biosynthetic process;0.0302165280098516!GO:0019863;IgE binding;0.0302165280098516!GO:0032763;regulation of mast cell cytokine production;0.0303998291120276!GO:0032762;mast cell cytokine production;0.0303998291120276!GO:0000209;protein polyubiquitination;0.030538005120043!GO:0006414;translational elongation;0.0305382118490415!GO:0019318;hexose metabolic process;0.0308729194001451!GO:0002449;lymphocyte mediated immunity;0.0315186366599427!GO:0030027;lamellipodium;0.0321543340260415!GO:0000278;mitotic cell cycle;0.0327744330688529!GO:0031098;stress-activated protein kinase signaling pathway;0.0328643225969871!GO:0005484;SNAP receptor activity;0.0330571971908273!GO:0006779;porphyrin biosynthetic process;0.0331108981120004!GO:0033014;tetrapyrrole biosynthetic process;0.0331108981120004!GO:0015630;microtubule cytoskeleton;0.0332076021628154!GO:0006338;chromatin remodeling;0.0335901336585364!GO:0006383;transcription from RNA polymerase III promoter;0.0338349653413!GO:0019864;IgG binding;0.0338349653413!GO:0006352;transcription initiation;0.0339742772864035!GO:0019901;protein kinase binding;0.0343653643198412!GO:0000303;response to superoxide;0.0346264826796559!GO:0007266;Rho protein signal transduction;0.0346989812793792!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0347021932815991!GO:0009165;nucleotide biosynthetic process;0.0347118156752935!GO:0002237;response to molecule of bacterial origin;0.0347118156752935!GO:0001784;phosphotyrosine binding;0.0351311654172389!GO:0046824;positive regulation of nucleocytoplasmic transport;0.0355436040675227!GO:0051789;response to protein stimulus;0.0362232667228174!GO:0006986;response to unfolded protein;0.0362232667228174!GO:0030125;clathrin vesicle coat;0.0363917084922325!GO:0030665;clathrin coated vesicle membrane;0.0363917084922325!GO:0016311;dephosphorylation;0.0363917084922325!GO:0030098;lymphocyte differentiation;0.0369969816351843!GO:0000786;nucleosome;0.037611890031524!GO:0043621;protein self-association;0.0378299481922974!GO:0003899;DNA-directed RNA polymerase activity;0.0381164911539984!GO:0004718;Janus kinase activity;0.0381359380374705!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0381418876281365!GO:0017166;vinculin binding;0.0382992083832955!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0390328437102217!GO:0045047;protein targeting to ER;0.0390328437102217!GO:0005996;monosaccharide metabolic process;0.039209668611239!GO:0008625;induction of apoptosis via death domain receptors;0.0394218551939002!GO:0032760;positive regulation of tumor necrosis factor production;0.039751514140089!GO:0043405;regulation of MAP kinase activity;0.0399860155880781!GO:0009897;external side of plasma membrane;0.0399860155880781!GO:0000059;protein import into nucleus, docking;0.039992858418529!GO:0003746;translation elongation factor activity;0.0406468673666095!GO:0030663;COPI coated vesicle membrane;0.0412148412119715!GO:0030126;COPI vesicle coat;0.0412148412119715!GO:0007006;mitochondrial membrane organization and biogenesis;0.0412148412119715!GO:0005938;cell cortex;0.0413730680019782!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0420050387838111!GO:0050776;regulation of immune response;0.0423838853955461!GO:0032640;tumor necrosis factor production;0.0429339489158953!GO:0030137;COPI-coated vesicle;0.042990652505778!GO:0033367;protein localization in mast cell secretory granule;0.0434444542133718!GO:0033365;protein localization in organelle;0.0434444542133718!GO:0033371;T cell secretory granule organization and biogenesis;0.0434444542133718!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0434444542133718!GO:0033375;protease localization in T cell secretory granule;0.0434444542133718!GO:0042629;mast cell granule;0.0434444542133718!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0434444542133718!GO:0033364;mast cell secretory granule organization and biogenesis;0.0434444542133718!GO:0033380;granzyme B localization in T cell secretory granule;0.0434444542133718!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0434444542133718!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0434444542133718!GO:0033368;protease localization in mast cell secretory granule;0.0434444542133718!GO:0033366;protein localization in secretory granule;0.0434444542133718!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0434444542133718!GO:0033374;protein localization in T cell secretory granule;0.0434444542133718!GO:0043507;positive regulation of JNK activity;0.0444379323850299!GO:0042288;MHC class I protein binding;0.044464472567927!GO:0048872;homeostasis of number of cells;0.0446588578725861!GO:0008383;manganese superoxide dismutase activity;0.0452894517970406!GO:0001315;age-dependent response to reactive oxygen species;0.0452894517970406!GO:0006405;RNA export from nucleus;0.0456521068407296!GO:0016504;protease activator activity;0.0462570190443002!GO:0002250;adaptive immune response;0.0462570190443002!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0462570190443002!GO:0045621;positive regulation of lymphocyte differentiation;0.0471971644803494!GO:0032386;regulation of intracellular transport;0.0478360096901517!GO:0050671;positive regulation of lymphocyte proliferation;0.0478360096901517!GO:0032946;positive regulation of mononuclear cell proliferation;0.0478360096901517!GO:0030833;regulation of actin filament polymerization;0.0480138330510495!GO:0000165;MAPKKK cascade;0.0480138330510495!GO:0040029;regulation of gene expression, epigenetic;0.0483426686706746!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0483426686706746!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0483426686706746!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0485491352071702!GO:0019220;regulation of phosphate metabolic process;0.0485633563325191!GO:0051174;regulation of phosphorus metabolic process;0.0485633563325191!GO:0008017;microtubule binding;0.0485633563325191!GO:0005669;transcription factor TFIID complex;0.0485633563325191!GO:0002684;positive regulation of immune system process;0.049250827596689!GO:0051087;chaperone binding;0.0492849550559828!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0493006779855698
 |sample_id=12181
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=blood
 |top_motifs=GATA6:3.60081030334;FOXO1,3,4:2.72126461122;FOXD3:2.27381208158;SPI1:2.26754567866;TOPORS:2.22056175066;ETS1,2:2.2173054452;SPIB:2.07972117766;ELF1,2,4:1.8325127222;RUNX1..3:1.72825577137;FOX{F1,F2,J1}:1.67075339677;DMAP1_NCOR{1,2}_SMARC:1.59546627006;NANOG{mouse}:1.5757638099;FOX{D1,D2}:1.55309084997;FOXP3:1.46342515848;T:1.45465930236;TFAP4:1.43011398649;STAT5{A,B}:1.31067636867;SPZ1:1.29224030041;STAT1,3:1.26914429856;IRF7:1.22397442636;ALX1:1.19585321848;CDX1,2,4:1.15749121509;BPTF:1.13521749554;IKZF2:1.06224908813;HMX1:1.03178414437;IRF1,2:0.97247643086;CEBPA,B_DDIT3:0.939105119922;POU5F1:0.938700659944;TLX2:0.933226513877;TFCP2:0.924405379894;FOXP1:0.907952316601;ZNF148:0.898961311717;PITX1..3:0.859418417286;POU2F1..3:0.814862426052;RXRA_VDR{dimer}:0.803461711816;MYFfamily:0.764804177428;EVI1:0.670457054138;SMAD1..7,9:0.620009498392;NR1H4:0.59988905871;FOXN1:0.554331670555;PAX3,7:0.538444841771;RREB1:0.532639248961;STAT2,4,6:0.531670681327;EP300:0.517300042397;NFE2L2:0.502949272872;ZNF423:0.499409968893;PDX1:0.483779419549;TGIF1:0.452489185438;NR6A1:0.444479684889;NFIL3:0.439527026369;FOXA2:0.43895881978;NKX2-2,8:0.429908786184;MYOD1:0.419183309108;SREBF1,2:0.411752731476;PAX2:0.401636807928;MZF1:0.331560345223;NFATC1..3:0.243319527723;MAZ:0.237363466651;NKX3-2:0.227530658778;BREu{core}:0.223782103753;ZEB1:0.179196657423;LMO2:0.174553134867;RFX2..5_RFXANK_RFXAP:0.163877903376;CUX2:0.0963289040112;AIRE:0.0948210760625;GATA4:0.0938462185857;SNAI1..3:0.0868640157596;CRX:0.0736692351299;OCT4_SOX2{dimer}:0.0729499418848;XCPE1{core}:0.0590018692361;ZBTB16:0.0186804475228;PPARG:0.0165255944903;NFIX:-0.0117411556101;ZNF238:-0.0210377736146;TAL1_TCF{3,4,12}:-0.0366726849286;NFKB1_REL_RELA:-0.0648097474932;ATF5_CREB3:-0.0957545467742;GLI1..3:-0.103899688481;HBP1_HMGB_SSRP1_UBTF:-0.110272326943;NKX3-1:-0.119270980001;MYB:-0.135042421373;FOX{I1,J2}:-0.143485216508;ALX4:-0.153530833489;SRF:-0.185067992211;SP1:-0.225484239274;NFE2:-0.230264745857;REST:-0.244809022826;RBPJ:-0.28249769634;CREB1:-0.31998655435;DBP:-0.331981068089;HLF:-0.335090915423;POU1F1:-0.385116550642;KLF4:-0.423730103176;TFAP2{A,C}:-0.442364559841;NR5A1,2:-0.471136048368;PATZ1:-0.491673895961;HNF4A_NR2F1,2:-0.496442167026;NKX2-1,4:-0.509275143896;NHLH1,2:-0.511562978241;ZFP161:-0.529545997593;NKX6-1,2:-0.545913133062;RXR{A,B,G}:-0.562844893391;ATF2:-0.574893096429;BACH2:-0.579226702396;MTF1:-0.581952852381;ESR1:-0.651649514966;PAX4:-0.659455572257;EGR1..3:-0.667895023607;PBX1:-0.696948580112;POU3F1..4:-0.704972625154;FOSL2:-0.715924674851;GTF2I:-0.716101332986;TFAP2B:-0.721990341985;ARID5B:-0.740750163444;PRDM1:-0.748552567958;FOS_FOS{B,L1}_JUN{B,D}:-0.751041377671;UFEwm:-0.751654498154;ELK1,4_GABP{A,B1}:-0.754116623361;NFE2L1:-0.755249344609;HOXA9_MEIS1:-0.755855452551;HIC1:-0.761923921782;LEF1_TCF7_TCF7L1,2:-0.788741914689;HNF1A:-0.789180087446;MED-1{core}:-0.797297471725;AR:-0.844063464736;RFX1:-0.877362331203;TBX4,5:-0.884581775155;YY1:-0.895274945052;MAFB:-0.921967702437;NR3C1:-0.965304297336;ZNF143:-0.966597632507;MEF2{A,B,C,D}:-0.986673374845;PRRX1,2:-0.995394889896;FOXQ1:-1.00392536923;JUN:-1.02160709189;MTE{core}:-1.0294138575;GZF1:-1.04846556176;SOX5:-1.05481799278;ATF4:-1.06945893125;POU6F1:-1.07775440434;PAX6:-1.11323697411;ADNP_IRX_SIX_ZHX:-1.11732616312;NRF1:-1.151783637;TLX1..3_NFIC{dimer}:-1.16641114457;NFY{A,B,C}:-1.18585049551;RORA:-1.21215985281;E2F1..5:-1.22545662967;TBP:-1.24402268163;HAND1,2:-1.25999507858;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.26542553485;SOX2:-1.27816068364;EN1,2:-1.27861374169;NKX2-3_NKX2-5:-1.30873765153;HES1:-1.31395724545;ZBTB6:-1.31678375922;HMGA1,2:-1.32696795061;EBF1:-1.33255222871;LHX3,4:-1.34361898891;ZIC1..3:-1.35230031497;GCM1,2:-1.35680368209;VSX1,2:-1.37455874238;ZNF384:-1.37580543965;SOX{8,9,10}:-1.39437541587;XBP1:-1.40165476144;GFI1:-1.42332786491;TP53:-1.4508285208;PAX5:-1.45138913926;FOXL1:-1.48606189551;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.5193882242;HIF1A:-1.58111757664;ONECUT1,2:-1.59689993795;AHR_ARNT_ARNT2:-1.6222686073;PAX8:-1.62934815754;GTF2A1,2:-1.63394109827;NANOG:-1.66881977415;TEAD1:-1.69205273096;FOXM1:-1.69962340949;GFI1B:-1.74381449236;ESRRA:-1.77468695791;MYBL2:-1.78234894449;HOX{A4,D4}:-1.79510269469;HOX{A6,A7,B6,B7}:-1.83287175377;HOX{A5,B5}:-1.95544094491;CDC5L:-2.05387101984;ATF6:-2.06303052188;HSF1,2:-2.07506958709;bHLH_family:-2.20971444287;PAX1,9:-2.37268258866;TFDP1:-2.37981177561;SOX17:-2.62151506916;TEF:-2.63285698698;IKZF1:-2.72344718941
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12181-129A3;search_select_hide=table117:FF:12181-129A3
 }}

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FF:12181-129A3: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:33, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0