FFCP PHASE1:Hg19::chr19:54372877..54373045,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:54372877..54373045,+
|short_description=p2@MYADM
|description=CAGE_peak_2_at_MYADM_5end
|association_with_transcript=0bp_to_ENST00000414489_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91663 | |EntrezGene=91663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7544 | |HGNC=7544 | ||
|TSSclassifier=strong | |||
|UniProt=C9JJV6 | |UniProt=C9JJV6 | ||
|association_with_transcript=0bp_to_ENST00000414489_5end | |||
|cluster_id=chr19:54372877..54373045,+ | |||
|description=CAGE_peak_2_at_MYADM_5end | |||
|id=chr19:54372877..54373045,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.74e-29!112;CL:0000049!3.74e-29!112;CL:0002057!1.14e-16!42;CL:0000766!1.62e-15!76;CL:0000860!2.66e-13!45;CL:0000557!1.10e-12!71;CL:0000048!1.49e-12!430;CL:0000034!2.06e-11!444;CL:0002009!6.22e-11!65;CL:0000839!7.61e-11!70;CL:0000723!1.02e-10!436;CL:0002194!1.95e-10!63;CL:0000576!1.95e-10!63;CL:0000040!1.95e-10!63;CL:0000559!1.95e-10!63;CL:0002320!1.76e-09!365;CL:0000134!3.92e-09!358;CL:0000144!6.33e-08!625;CL:0000988!1.40e-07!182;CL:0000219!1.97e-07!390;CL:0000037!4.32e-07!172;CL:0000566!4.32e-07!172;CL:0000012!4.44e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.63e-15;33!CL:0002057;4.63e-15;33!CL:0000763;7.99e-12;100!CL:0000473;6.61e-11;39!CL:0000234;6.61e-11;39!CL:0000576;2.93e-10;48!CL:0000766;2.26e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,5.99e-32,108;CL:0000049,5.99e-32,108;CL:0000766,7.00e-18,72;CL:0000860,1.14e-16,42;CL:0002057,1.14e-16,42;CL:0000557,7.77e-15,67;CL:0000473,9.65e-15,48;CL:0000234,9.65e-15,48;CL:0000048,1.29e-13,427;CL:0002009,5.45e-13,61;CL:0000839,8.65e-13,66;CL:0002194,1.80e-12,59;CL:0000576,1.80e-12,59;CL:0000040,1.80e-12,59;CL:0000559,1.80e-12,59;CL:0000034,2.09e-12,441;CL:0000723,1.11e-11,433;CL:0002320,1.75e-10,361;CL:0000134,4.05e-10,354;CL:0000988,1.45e-08,177;CL:0000219,2.85e-08,386;CL:0000037,5.92e-08,168;CL:0002032,1.52e-07,161;CL:0000837,1.52e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.12e-12;42!CL:0000049;1.06e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!9.34e-19!31;DOID:1240!2.14e-12!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.90e-18;31!DOID:1240;3.99e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.33e-19,31;DOID:1240,2.08e-12,39 | |||
|ontology_enrichment_uberon=UBERON:0003081!1.54e-16!216;UBERON:0002390!1.98e-13!102;UBERON:0003061!1.98e-13!102;UBERON:0002193!2.16e-12!112;UBERON:0000926!7.42e-12!448;UBERON:0004120!7.42e-12!448;UBERON:0006603!7.42e-12!448;UBERON:0002371!1.05e-10!80;UBERON:0001474!2.07e-10!86;UBERON:0002405!2.43e-10!115;UBERON:0002204!2.77e-10!167;UBERON:0002384!8.94e-10!375;UBERON:0003914!1.53e-07!118;UBERON:0004765!2.06e-07!101;UBERON:0001434!2.06e-07!101;UBERON:0004535!6.50e-07!110 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.27e-16,203;UBERON:0002390,3.44e-15,98;UBERON:0003061,3.44e-15,98;UBERON:0000926,1.82e-14,315;UBERON:0004120,1.82e-14,315;UBERON:0006603,1.82e-14,315;UBERON:0002193,5.79e-14,108;UBERON:0002371,1.79e-12,76;UBERON:0001474,4.57e-12,82;UBERON:0002204,1.60e-11,167;UBERON:0002384,8.71e-11,371;UBERON:0004765,2.28e-10,90;UBERON:0002405,1.56e-09,93;UBERON:0001434,7.86e-09,100;UBERON:0003914,1.20e-07,117;UBERON:0004535,9.70e-07,109 | |||
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| ||
|short_description=p2@MYADM | |||
}} | }} |
Latest revision as of 20:03, 19 September 2015
Short description: | p2@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYADM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000414489_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | C9JJV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.99e-32 | 108 |
common myeloid progenitor | 5.99e-32 | 108 |
myeloid leukocyte | 7.00e-18 | 72 |
classical monocyte | 1.14e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-16 | 42 |
granulocyte monocyte progenitor cell | 7.77e-15 | 67 |
defensive cell | 9.65e-15 | 48 |
phagocyte | 9.65e-15 | 48 |
multi fate stem cell | 1.29e-13 | 427 |
macrophage dendritic cell progenitor | 5.45e-13 | 61 |
myeloid lineage restricted progenitor cell | 8.65e-13 | 66 |
monopoietic cell | 1.80e-12 | 59 |
monocyte | 1.80e-12 | 59 |
monoblast | 1.80e-12 | 59 |
promonocyte | 1.80e-12 | 59 |
stem cell | 2.09e-12 | 441 |
somatic stem cell | 1.11e-11 | 433 |
connective tissue cell | 1.75e-10 | 361 |
mesenchymal cell | 4.05e-10 | 354 |
hematopoietic cell | 1.45e-08 | 177 |
motile cell | 2.85e-08 | 386 |
hematopoietic stem cell | 5.92e-08 | 168 |
hematopoietic oligopotent progenitor cell | 1.52e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.27e-16 | 203 |
hematopoietic system | 3.44e-15 | 98 |
blood island | 3.44e-15 | 98 |
mesoderm | 1.82e-14 | 315 |
mesoderm-derived structure | 1.82e-14 | 315 |
presumptive mesoderm | 1.82e-14 | 315 |
hemolymphoid system | 5.79e-14 | 108 |
bone marrow | 1.79e-12 | 76 |
bone element | 4.57e-12 | 82 |
musculoskeletal system | 1.60e-11 | 167 |
connective tissue | 8.71e-11 | 371 |
skeletal element | 2.28e-10 | 90 |
immune system | 1.56e-09 | 93 |
skeletal system | 7.86e-09 | 100 |
epithelial tube | 1.20e-07 | 117 |
cardiovascular system | 9.70e-07 | 109 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.33e-19 | 31 |
leukemia | 2.08e-12 | 39 |