FFCP PHASE1:Hg19::chr19:9929708..9929789,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:9929708..9929789,-
|short_description=p1@FBXL12
|description=CAGE_peak_1_at_FBXL12_5end
|association_with_transcript=0bp_to_ENST00000247977,NM_017703,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54850 | |EntrezGene=54850 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13611 | |HGNC=13611 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXK8 | |UniProt=Q9NXK8 | ||
|association_with_transcript=0bp_to_ENST00000247977,NM_017703,uc002mme.2,uc002mmf.2,uc002mmg.2_5end | |||
|cluster_id=chr19:9929708..9929789,- | |||
|description=CAGE_peak_1_at_FBXL12_5end | |||
|id=chr19:9929708..9929789,- | |||
|ontology_enrichment_celltype=CL:0002371!4.80e-25!591;CL:0000144!1.38e-23!625;CL:0000548!4.35e-17!679;CL:0000004!4.35e-17!679;CL:0000255!4.35e-17!679;CL:0000012!1.62e-16!682;CL:0002057!1.82e-16!42;CL:0002009!1.72e-15!65;CL:0000860!2.09e-15!45;CL:0000766!4.84e-15!76;CL:0002194!6.49e-15!63;CL:0000576!6.49e-15!63;CL:0000040!6.49e-15!63;CL:0000559!6.49e-15!63;CL:0000723!2.06e-14!436;CL:0000048!2.44e-14!430;CL:0000063!3.97e-14!578;CL:0000557!5.71e-14!71;CL:0002320!9.98e-14!365;CL:0000034!3.28e-13!444;CL:0000134!9.04e-13!358;CL:0000839!1.77e-12!70;CL:0000003!1.18e-10!722;CL:0000738!2.90e-09!140;CL:0000219!6.50e-09!390;CL:0002087!1.44e-08!119;CL:0002031!5.72e-08!124;CL:0000763!7.30e-08!112;CL:0000049!7.30e-08!112;CL:0000988!7.71e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.24e-13;33!CL:0002057;4.24e-13;33!CL:0000473;7.98e-11;39!CL:0000234;7.98e-11;39!CL:0000576;1.98e-10;48!CL:0000766;1.53e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.82e-16,42;CL:0002057,1.82e-16,42;CL:0000473,2.08e-16,48;CL:0000234,2.08e-16,48;CL:0002009,3.13e-16,61;CL:0002194,1.19e-15,59;CL:0000576,1.19e-15,59;CL:0000040,1.19e-15,59;CL:0000559,1.19e-15,59;CL:0000766,1.24e-15,72;CL:0000723,1.13e-14,433;CL:0000048,1.33e-14,427;CL:0000557,1.47e-14,67;CL:0002320,1.06e-13,361;CL:0000034,1.86e-13,441;CL:0000839,5.33e-13,66;CL:0000134,9.50e-13,354;CL:0000738,2.09e-09,136;CL:0000219,7.04e-09,386;CL:0002087,9.93e-09,115;CL:0002031,4.16e-08,120;CL:0000763,5.08e-08,108;CL:0000049,5.08e-08,108;CL:0000988,8.03e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.29e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.53e-14!216;UBERON:0002405!8.06e-14!115;UBERON:0002371!1.46e-12!80;UBERON:0002204!1.87e-12!167;UBERON:0002384!2.53e-12!375;UBERON:0001474!1.27e-11!86;UBERON:0002390!2.13e-11!102;UBERON:0003061!2.13e-11!102;UBERON:0002193!4.18e-11!112;UBERON:0004765!7.26e-11!101;UBERON:0001434!7.26e-11!101;UBERON:0000926!7.76e-09!448;UBERON:0004120!7.76e-09!448;UBERON:0006603!7.76e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.67e-14,315;UBERON:0004120,3.67e-14,315;UBERON:0006603,3.67e-14,315;UBERON:0003081,3.86e-13,203;UBERON:0002204,3.94e-13,167;UBERON:0002371,5.20e-13,76;UBERON:0002405,1.28e-12,93;UBERON:0002384,2.71e-12,371;UBERON:0001474,5.42e-12,82;UBERON:0004765,6.77e-12,90;UBERON:0002390,1.09e-11,98;UBERON:0003061,1.09e-11,98;UBERON:0002193,2.36e-11,108;UBERON:0001434,2.82e-11,100;UBERON:0001008,2.27e-07,48;UBERON:0006554,2.46e-07,47 | |||
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| ||
|short_description=p1@FBXL12 | |||
}} | }} |
Latest revision as of 02:49, 25 September 2015
Short description: | p1@FBXL12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FBXL12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000247977, NM_017703, uc002mme.2, uc002mmf.2, uc002mmg.2_5end |
EntrezGene: | FBXL12 |
HGNC: | 13611 |
UniProt: | Q9NXK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.82e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.82e-16 | 42 |
defensive cell | 2.08e-16 | 48 |
phagocyte | 2.08e-16 | 48 |
macrophage dendritic cell progenitor | 3.13e-16 | 61 |
monopoietic cell | 1.19e-15 | 59 |
monocyte | 1.19e-15 | 59 |
monoblast | 1.19e-15 | 59 |
promonocyte | 1.19e-15 | 59 |
myeloid leukocyte | 1.24e-15 | 72 |
somatic stem cell | 1.13e-14 | 433 |
multi fate stem cell | 1.33e-14 | 427 |
granulocyte monocyte progenitor cell | 1.47e-14 | 67 |
connective tissue cell | 1.06e-13 | 361 |
stem cell | 1.86e-13 | 441 |
myeloid lineage restricted progenitor cell | 5.33e-13 | 66 |
mesenchymal cell | 9.50e-13 | 354 |
leukocyte | 2.09e-09 | 136 |
motile cell | 7.04e-09 | 386 |
nongranular leukocyte | 9.93e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.16e-08 | 120 |
myeloid cell | 5.08e-08 | 108 |
common myeloid progenitor | 5.08e-08 | 108 |
hematopoietic cell | 8.03e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.67e-14 | 315 |
mesoderm-derived structure | 3.67e-14 | 315 |
presumptive mesoderm | 3.67e-14 | 315 |
lateral plate mesoderm | 3.86e-13 | 203 |
musculoskeletal system | 3.94e-13 | 167 |
bone marrow | 5.20e-13 | 76 |
immune system | 1.28e-12 | 93 |
connective tissue | 2.71e-12 | 371 |
bone element | 5.42e-12 | 82 |
skeletal element | 6.77e-12 | 90 |
hematopoietic system | 1.09e-11 | 98 |
blood island | 1.09e-11 | 98 |
hemolymphoid system | 2.36e-11 | 108 |
skeletal system | 2.82e-11 | 100 |
renal system | 2.27e-07 | 48 |
urinary system structure | 2.46e-07 | 47 |