FFCP PHASE1:Hg19::chr1:221900042..221900044,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:221900042..221900044,- | |||
|description=CAGE_peak_at_chr1:221900042..221900044,- | |description=CAGE_peak_at_chr1:221900042..221900044,- | ||
|id=chr1:221900042..221900044,- | |id=chr1:221900042..221900044,- | ||
|ontology_enrichment_celltype=CL:0000860;2.72e-20;33!CL:0002057;2.72e-20;33!CL:0000473;1.59e-16;39!CL:0000234;1.59e-16;39!CL:0000576;8.76e-15;48!CL:0000766;1.91e-12;69!CL:0000624;3.34e-12;6!CL:0000623;3.53e-10;3!CL:0000791;1.87e-09;18!CL:0000789;1.87e-09;18!CL:0002419;1.87e-09;18!CL:0000767;2.40e-09;3!CL:0002087;1.40e-08;104!CL:0000738;8.11e-08;136!CL:0000815;4.77e-07;2!CL:0000792;4.77e-07;2!CL:0002677;4.77e-07;2!CL:0000763;7.31e-07;100 | |ontology_enrichment_celltype=CL:0000738!2.12e-19!140;CL:0000766!4.65e-17!76;CL:0002031!5.03e-17!124;CL:0000037!5.74e-17!172;CL:0000566!5.74e-17!172;CL:0002087!8.70e-17!119;CL:0002057!1.27e-16!42;CL:0000557!4.07e-16!71;CL:0000839!9.08e-16!70;CL:0002032!1.39e-15!165;CL:0000837!1.39e-15!165;CL:0000988!2.07e-15!182;CL:0000860!5.49e-15!45;CL:0002194!4.44e-14!63;CL:0000576!4.44e-14!63;CL:0000040!4.44e-14!63;CL:0000559!4.44e-14!63;CL:0002009!6.69e-14!65;CL:0000763!1.10e-12!112;CL:0000049!1.10e-12!112;CL:0000134!7.24e-09!358;CL:0002320!3.76e-08!365;CL:0000219!6.68e-08!390 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;2.72e-20;33!CL:0002057;2.72e-20;33!CL:0000473;1.59e-16;39!CL:0000234;1.59e-16;39!CL:0000576;8.76e-15;48!CL:0000766;1.91e-12;69!CL:0000624;3.34e-12;6!CL:0000623;3.53e-10;3!CL:0000791;1.87e-09;18!CL:0000789;1.87e-09;18!CL:0002419;1.87e-09;18!CL:0000767;2.40e-09;3!CL:0002087;1.40e-08;104!CL:0000738;8.11e-08;136!CL:0000815;4.77e-07;2!CL:0000792;4.77e-07;2!CL:0002677;4.77e-07;2!CL:0000763;7.31e-07;100 | ||
|ontology_enrichment_disease=DOID:4468;6.73e-07;2 | |ontology_enrichment_celltype_v019_2=CL:0000738,1.89e-31,136;CL:0002031,7.51e-28,120;CL:0002087,1.03e-25,115;CL:0000037,1.10e-24,168;CL:0000766,2.24e-24,72;CL:0002032,1.93e-23,161;CL:0000837,1.93e-23,161;CL:0000988,7.45e-23,177;CL:0000860,1.65e-20,42;CL:0002057,1.65e-20,42;CL:0000473,1.90e-19,48;CL:0000234,1.90e-19,48;CL:0000839,3.79e-19,66;CL:0000557,9.00e-19,67;CL:0002194,4.31e-16,59;CL:0000576,4.31e-16,59;CL:0000040,4.31e-16,59;CL:0000559,4.31e-16,59;CL:0002009,2.13e-15,61;CL:0000763,6.98e-14,108;CL:0000049,6.98e-14,108;CL:0000624,2.07e-12,6;CL:0000623,1.90e-10,3;CL:0000825,1.90e-10,3;CL:0000838,9.79e-10,52;CL:0000791,1.20e-09,18;CL:0000789,1.20e-09,18;CL:0002420,1.20e-09,18;CL:0002419,1.20e-09,18;CL:0000790,1.20e-09,18;CL:0000134,1.68e-09,354;CL:0000542,1.75e-09,53;CL:0000051,1.75e-09,53;CL:0000767,3.74e-09,3;CL:0002320,4.34e-09,361;CL:0000219,3.25e-08,386;CL:0000815,4.87e-07,2;CL:0000792,4.87e-07,2;CL:0002677,4.87e-07,2 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;5.10e-17;42!CL:0000790;1.87e-09;18 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;6.73e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,7.18e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.15e-16!80;UBERON:0001474!1.33e-15!86;UBERON:0002390!8.54e-15!102;UBERON:0003061!8.54e-15!102;UBERON:0004765!3.67e-13!101;UBERON:0001434!3.67e-13!101;UBERON:0002405!7.22e-13!115;UBERON:0002193!1.38e-11!112;UBERON:0002384!1.30e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.97e-19,76;UBERON:0001474,4.38e-17,82;UBERON:0004765,5.48e-15,90;UBERON:0002390,1.69e-14,98;UBERON:0003061,1.69e-14,98;UBERON:0002405,2.69e-14,93;UBERON:0001434,7.58e-13,100;UBERON:0002193,1.53e-12,108;UBERON:0002384,4.00e-09,371 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.382067028739756,0.328402357799783,0.708397031823113,1.57345710739562,2.30297638858328,1.08371286321253,0,0,0,0.232401601740905,0,1.46800219667424,0.553995408531877,4.01088894940283,3.25516306073778,0.895661896959697,0,1.03030227053675,2.32637182047304,0.755751887377619,1.69808842831471,2.78914844286822,1.6446715520873,1.54853185447552,0.575384784644301,0.512321413058201,0.945928919554341,5.5159308917859,2.5819387343353,0,2.63539275359647,2.18324920046277,0.224723484445085,0.918251677112708,0.962787081228281,1.27867425159808,0.329851300186716,1.19678194572979,1.27867425159808,1.16083695451434,0,0,3.26623264833766,1.5644487552606,1.08594422352558,1.21079900526674,0.368277635987565,0.632924774881769,0.633765858935825,0.637812899895131,0.419317291016752,0,0.450530678524519,0.32145117339416,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,2.84606484554724,2.34894875748376,2.29363936875137,0,0.560508562981536,0.526768169550154,1.57367816091066,1.96505381374582,2.2616164889946,0.167186495390678,1.30368906653436,0.946895611469467,3.89653456815823,0,3.82987679717288,1.77227115666897,2.97884250141517,0.25618263945135,0.260118695119756,0.493313713811028,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,1.71813722741315,1.26509846009751,0.318565414324097,0,0,0,0,0,0,0,1.81446068902259,6.68600489458768,3.47578569318718,0,0,0,0,0,0.144846518960824,0,0,0.567208902984407,0.443458794925128,0.351339142772504,0.0654895377488563,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0.23486899728753,0.161872944368132,0.140450806702248,0.204154171254893,0.491337269247072,0.103325781175765,0,0.494533858557114,0,0,0.505008341862199,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0,0.717558542755448,0,0,0.600182192168805,0.103052529238439,0.515281080091258,0.37223371266318,0.843881661206331,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.710019185033229,0,0,0.966304265816484,0,0.286804595389004,0,0,0,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0.882926198829301,0.368965315629341,0,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.297262324577456,0,0.335964256397719,0,0.0895585227028483,0,0,0.492663237895943,0.968532774145487,2.69526550203004,2.59415916150531,4.16600030307054,0,0,0,0,0.205654985406647,0,0,0,0,0,0.517086863031111,0,0,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0,0,0.823240336780769,0,0.355391948742546,0,0,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0,0,0,0.579125226670317,1.43833425785268,0.358121926479791,0.896681151948218,1.97030760201927,6.46882724578552,4.36366323351144,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.521301686808497,0,0,0.413536052245775,1.50999940573032,0.74709290462411,0,0,0.30239029332968,0.248107807818777,0.920771839728375,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0,0.655622074797121,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.165018999841176,0.574265537996172,0,0,0,0,0,0,0.322260734604821,0,0,0,0,0.384380134730212,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.823611089208164,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0.640276590135727,0,0.199579371432817,0.383010740264733,0.846694330895531,0,0.280797178113459,0.684704037099577,0,0,0.169291777801603,0.642352300414798,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0.333698283423817,0,0.278406173895242,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0.568272293612826,0,0,0.307160702099232,0,0.281338832821026,0.333926115068718,0,0.422250816255987,0.19924798825107,0,0.503865495708552,0.613612095012929,0.123084805461069,0,0.629078458031288,0,0,0,0,1.11136990144637,0,0,0,0,0.174919999992391,0,0.1137934482855,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0,0.886642856860642,0,0,0,0.153900517007594,0.455768223388005,0,0,0,0.31900115973192,0,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0.158936578980379,1.26598838716816,2.77495773870551,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0.247127877893006,0.208843899010911,0.269604531922708,2.40773294189637,1.1713222286267,0,0.19566461893209,0,0,1.20990716048664,0,0,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0.685946781900644,0.522355239482415,0,0.171986032471617,0,0.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| ||
|short_description=p@chr1:221900042..221900044,- | |short_description=p@chr1:221900042..221900044,- | ||
}} | }} |
Latest revision as of 04:10, 28 July 2015
Short description: | p@chr1:221900042..221900044, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:221900042..221900044, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.97e-19 | 76 |
bone element | 4.38e-17 | 82 |
skeletal element | 5.48e-15 | 90 |
hematopoietic system | 1.69e-14 | 98 |
blood island | 1.69e-14 | 98 |
immune system | 2.69e-14 | 93 |
skeletal system | 7.58e-13 | 100 |
hemolymphoid system | 1.53e-12 | 108 |
connective tissue | 4.00e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 7.18e-07 | 2 |