FFCP PHASE1:Hg19::chr12:56367241..56367265,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6490 | |EntrezGene=6490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10880 | |HGNC=10880 | ||
|TSSclassifier=strong | |||
|UniProt=F8VYZ1 | |UniProt=F8VYZ1 | ||
|association_with_transcript=-142bp_to_ENST00000549233_5end | |association_with_transcript=-142bp_to_ENST00000549233_5end | ||
|cluster_id=chr12:56367241..56367265,- | |||
|description=CAGE_peak_2_at_PMEL_5end | |description=CAGE_peak_2_at_PMEL_5end | ||
|id=chr12:56367241..56367265,- | |id=chr12:56367241..56367265,- | ||
|ontology_enrichment_celltype=CL:0000860;7.50e-31;33!CL:0002057;7.50e-31;33!CL:0000473;4.40e-20;39!CL:0000234;4.40e-20;39!CL:0000576;1.50e-18;48!CL:0000766;2.77e-15;69!CL:0002087;1.15e-09;104!CL:0002393;4.02e-08;6!CL:0002397;4.02e-08;6!CL:0000763;5.92e-08;100!CL:0000767;6.27e-07;3!CL:0000569;8.58e-07;4 | |ontology_enrichment_celltype=CL:0000860!7.05e-25!45;CL:0002057!1.83e-23!42;CL:0000766!1.14e-20!76;CL:0000557!6.62e-18!71;CL:0002009!2.05e-16!65;CL:0000134!2.40e-16!358;CL:0000839!2.89e-16!70;CL:0000738!3.44e-16!140;CL:0002320!7.34e-16!365;CL:0002194!2.04e-15!63;CL:0000576!2.04e-15!63;CL:0000040!2.04e-15!63;CL:0000559!2.04e-15!63;CL:0000763!9.67e-15!112;CL:0000049!9.67e-15!112;CL:0000063!4.14e-14!578;CL:0000219!4.64e-14!390;CL:0000012!1.27e-12!682;CL:0000048!1.67e-12!430;CL:0000037!3.80e-12!172;CL:0000566!3.80e-12!172;CL:0000034!6.94e-12!444;CL:0000723!9.90e-12!436;CL:0000548!1.29e-11!679;CL:0000004!1.29e-11!679;CL:0000255!1.29e-11!679;CL:0002031!2.29e-11!124;CL:0000988!3.13e-11!182;CL:0002032!6.11e-11!165;CL:0000837!6.11e-11!165;CL:0002087!3.27e-10!119;CL:0000144!5.99e-10!625;CL:0000003!4.14e-09!722;CL:0002371!1.73e-08!591 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;7.50e-31;33!CL:0002057;7.50e-31;33!CL:0000473;4.40e-20;39!CL:0000234;4.40e-20;39!CL:0000576;1.50e-18;48!CL:0000766;2.77e-15;69!CL:0002087;1.15e-09;104!CL:0002393;4.02e-08;6!CL:0002397;4.02e-08;6!CL:0000763;5.92e-08;100!CL:0000767;6.27e-07;3!CL:0000569;8.58e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.16e-37,42;CL:0002057,1.16e-37,42;CL:0000766,5.26e-33,72;CL:0000473,1.26e-31,48;CL:0000234,1.26e-31,48;CL:0000557,3.85e-28,67;CL:0000839,9.61e-27,66;CL:0000738,3.51e-26,136;CL:0002009,4.89e-24,61;CL:0002194,3.10e-23,59;CL:0000576,3.10e-23,59;CL:0000040,3.10e-23,59;CL:0000559,3.10e-23,59;CL:0000763,8.49e-23,108;CL:0000049,8.49e-23,108;CL:0000037,3.59e-20,168;CL:0002031,6.48e-20,120;CL:0000988,2.93e-19,177;CL:0002032,6.27e-19,161;CL:0000837,6.27e-19,161;CL:0002087,3.13e-17,115;CL:0000134,8.58e-16,354;CL:0002320,4.67e-15,361;CL:0000219,1.04e-13,386;CL:0000034,1.66e-10,441;CL:0000048,2.07e-10,427;CL:0000723,5.71e-10,433;CL:0000767,5.70e-07,3;CL:0000097,6.68e-07,5;CL:0002028,6.68e-07,5;CL:0000569,8.76e-07,4;CL:0000011,8.76e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002057;2.31e-27;42!CL:0000011;8.58e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.73e-16!80;UBERON:0001474!9.72e-16!86;UBERON:0002384!4.75e-15!375;UBERON:0002193!1.21e-14!112;UBERON:0002390!1.67e-14!102;UBERON:0003061!1.67e-14!102;UBERON:0004765!3.32e-14!101;UBERON:0001434!3.32e-14!101;UBERON:0002405!6.09e-12!115;UBERON:0002204!6.29e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.76e-26,76;UBERON:0002390,6.71e-24,98;UBERON:0003061,6.71e-24,98;UBERON:0001474,1.12e-23,82;UBERON:0004765,6.76e-22,90;UBERON:0002193,1.48e-21,108;UBERON:0002405,1.30e-20,93;UBERON:0001434,1.60e-18,100;UBERON:0002384,2.15e-15,371;UBERON:0003081,6.12e-11,203;UBERON:0002204,2.16e-07,167 | |||
|phase1_expression=0.908391896352783,0.856402095563933,0.281908808191942,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0.218441372130172,0.527533956456907,0.123766352960047,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0.152826811495903,0.492603536699674,0,5.50709987588466,2.30297638858328,3.8704030829019,0,0,0.369754010166788,0,0,0.880801318004542,9.41792194504192,6.61796676651468,5.4252717678963,0.223915474239924,0,0.257575567634187,1.16318591023652,1.13362783106643,0.727752183563449,1.85943229524548,0.822335776043652,3.09706370895104,2.8769239232215,3.33008918487831,1.6553756092201,2.06847408441971,1.29096936716765,1.35426486594342,1.69418105588344,0.818718450173537,4.04502272001152,2.14258724659632,3.53021929783703,1.91801137739712,0.329851300186716,1.99463657621632,0.426224750532694,4.93355705668593,2.26954089876456,3.11411124497787,1.25624332628372,2.08593167368081,2.6062661364614,3.63239701580021,4.78760926783834,4.74693581161327,0.633765858935825,1.06302149982522,1.46761051855863,1.57260083605093,1.50176892841506,0.964353520182481,0.855038231223746,0.39783335439818,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0,3.98449078376614,2.34894875748376,1.52909291250092,1.32171328579026,4.48406850385229,0.263384084775077,0.983548850569165,0.393010762749165,2.05601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,1.05402583354441,0,0,0.473554504088034,0,0.201606743224732,0.534880391567015,0.579297615531196,0,0,0.12786256184353,0.722878304769133,0,0.289693037921647,0,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0,0,0.26591592103773,0.476981248610684,1.14398982156026,0.371457501329565,0,0,0,0.56530794192401,0,0,0,1.03366703667732,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0.735326160691737,0,0.535798369704479,0.44905874525234,0.112611480483322,0,0,0,5.27121669744253,3.87780264148325,0,0,0.25326102332916,1.45650098894541,0.573673241497627,0,0,0,0,0.311211035399766,0.538842688278752,0.653847612453835,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.469737994575059,0.161872944368132,0.702254033511242,0.408308342509787,0.245668634623536,0.309977343527296,0,0,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.226864366320042,1.07633781413317,0.213557388818567,0,0.900273288253207,0.206105058476878,1.54584324027377,0,0.506328996723799,0.389748020644795,1.26216887122057,0.552299391853796,0.161646056818812,2.4850671476163,0.403008392910561,0.169560592310488,0.386521706326594,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0.464367928031979,2.16563844500876,0.236613600079688,0.337169380156203,0,0.882351781859152,0.435758888184812,0.237270619111097,0.539325232640658,0.588664395376038,0.38474715694639,0.738155454624648,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0.100528972411631,0.185176890317059,0.325808305310325,0,0,0,0,0,0.462985512576611,0.570762456703795,0,0.858486162094873,0,0,0,1.87467667973554,0.503946384596579,0.141775097242386,0.0895585227028483,0,0,1.97065295158377,0.088048434013226,3.31724984865235,6.48539790376326,4.92345490362882,0.126995788584338,0.381988425558278,1.17217447210047,1.71072446022705,0.205654985406647,0,0,0.448524337381443,0,0.1466765716419,0.258543431515556,3.57656445851882,0,0,1.04007436911366,0,0,0,0.428933980974443,0,0,0,1.06617584622764,0,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,0.434343920002738,0,0.358121926479791,0,2.36436912242313,2.15627574859517,3.20857590699371,0,0,0,0.167516265334349,0,0.749007023947182,0,0.828831026872071,0,0,0.813795071099207,0.207970861530807,1.07057393278297,2.20783381047509,0.937131319941706,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0.413536052245775,1.2942852049117,1.06727557803444,0.606255142892519,0,0,0,2.91577749247319,0.280660094433074,0.128139149255701,0,0,1.48418066444991,0.308419387605311,0.177561725313127,0.410635780069046,0,0.697262270759755,0,0,0.276242966807689,0.574072240823034,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0,0,0.510281115829547,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.457847324091717,0.165018999841176,0,0,0,0,0.308097234229289,0.15350367472613,0.413509717453592,0.322260734604821,0,0.170453254832202,0.0890320356467374,0.165284915360978,0,2.4246415373971,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0.286249773483982,0,0,0.38126038784765,0.255897791311334,0,0,0.78494864019923,0,0,0.471249609382746,0,0,0,0.975267478179181,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0.563391205064483,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,0.282431402330337,0,0,0.886860307073351,0,0,0,0,0.476463550915578,0.411362273086194,1.2969466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| ||
|short_description=p2@PMEL | |short_description=p2@PMEL | ||
}} | }} |
Latest revision as of 09:24, 19 September 2015
Short description: | p2@PMEL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PMEL_5end |
Coexpression cluster: | NA |
Association with transcript: | -142bp_to_ENST00000549233_5end |
EntrezGene: | PMEL |
HGNC: | 10880 |
UniProt: | F8VYZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.76e-26 | 76 |
hematopoietic system | 6.71e-24 | 98 |
blood island | 6.71e-24 | 98 |
bone element | 1.12e-23 | 82 |
skeletal element | 6.76e-22 | 90 |
hemolymphoid system | 1.48e-21 | 108 |
immune system | 1.30e-20 | 93 |
skeletal system | 1.60e-18 | 100 |
connective tissue | 2.15e-15 | 371 |
lateral plate mesoderm | 6.12e-11 | 203 |
musculoskeletal system | 2.16e-07 | 167 |