FFCP PHASE1:Hg19::chr10:17275853..17275926,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:17275853..17275926,- | |||
|coexpression_cluster_id=C490 | |coexpression_cluster_id=C490 | ||
|description=CAGE_peak_at_chr10:17275853..17275926,- | |description=CAGE_peak_at_chr10:17275853..17275926,- | ||
|id=chr10:17275853..17275926,- | |id=chr10:17275853..17275926,- | ||
|ontology_enrichment_celltype=CL:0000359;1.79e-09;32!CL:0002620;3.06e-09;23!CL:0000192;8.12e-09;43!CL:0000187;4.25e-08;55!CL:0000057;1.67e-07;73!CL:0000393;8.19e-07;61!CL:0000211;8.19e-07;61 | |ontology_enrichment_celltype=CL:0000055!5.00e-31!180;CL:0002371!1.64e-25!591;CL:0000144!9.04e-24!625;CL:0000048!1.26e-18!430;CL:0000222!3.11e-18!119;CL:0000723!5.10e-17!436;CL:0000057!2.96e-16!75;CL:0000034!4.14e-16!444;CL:0000548!3.90e-15!679;CL:0000004!3.90e-15!679;CL:0000255!3.90e-15!679;CL:0000012!4.00e-15!682;CL:0000680!3.02e-13!57;CL:0000056!3.02e-13!57;CL:0000355!3.02e-13!57;CL:0000183!3.14e-13!59;CL:0000187!9.19e-13!54;CL:0000393!6.01e-12!60;CL:0000211!6.01e-12!60;CL:0000003!6.84e-11!722;CL:0000192!1.43e-10!42;CL:0000514!1.43e-10!42;CL:0000359!2.31e-09!32;CL:0002320!6.38e-09!365;CL:0002620!1.77e-08!23;CL:0000219!9.20e-08!390;CL:0000134!1.65e-07!358;CL:0000220!7.29e-07!246 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;1.79e-09;32!CL:0002620;3.06e-09;23!CL:0000192;8.12e-09;43!CL:0000187;4.25e-08;55!CL:0000057;1.67e-07;73!CL:0000393;8.19e-07;61!CL:0000211;8.19e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.55e-19,121;CL:0000048,5.76e-19,427;CL:0000057,1.97e-18,76;CL:0000723,1.92e-17,433;CL:0000034,3.49e-16,441;CL:0000680,1.19e-14,58;CL:0000056,1.19e-14,58;CL:0000355,1.19e-14,58;CL:0000187,4.03e-14,55;CL:0000393,5.97e-13,61;CL:0000211,5.97e-13,61;CL:0000192,1.62e-11,43;CL:0000514,1.62e-11,43;CL:0000359,9.06e-10,32;CL:0002620,2.30e-09,23;CL:0002320,1.13e-08,361;CL:0002321,3.69e-08,250;CL:0000219,1.78e-07,386;CL:0000134,3.20e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;8.12e-09;43!CL:0000355;1.03e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004573;4.87e-10;33!UBERON:0004571;4.87e-10;33!UBERON:0001637;8.99e-10;42!UBERON:0003509;8.99e-10;42!UBERON:0004572;8.99e-10;42!UBERON:0007500;1.01e-08;56!UBERON:0001981;1.01e-08;56!UBERON:0004537;1.01e-08;56!UBERON:0002049;1.05e-07;75!UBERON:0007798;1.05e-07;75!UBERON:0000947;1.23e-07;21!UBERON:0010191;1.23e-07;21!UBERON:0003914;1.93e-07;74!UBERON:0000055;4.50e-07;65!UBERON:0002384;6.09e-07;198 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.82e-17!83;UBERON:0002329!5.82e-17!83;UBERON:0003077!5.82e-17!83;UBERON:0003059!5.82e-17!83;UBERON:0007282!5.82e-17!83;UBERON:0009618!5.82e-17!83;UBERON:0007285!5.82e-17!83;UBERON:0002049!1.40e-16!79;UBERON:0007798!1.40e-16!79;UBERON:0002204!4.71e-16!167;UBERON:0004535!1.18e-15!110;UBERON:0004290!1.78e-15!70;UBERON:0001009!7.50e-15!113;UBERON:0003081!8.30e-15!216;UBERON:0000055!5.15e-14!69;UBERON:0001981!1.99e-13!60;UBERON:0007500!1.99e-13!60;UBERON:0004537!1.99e-13!60;UBERON:0006965!1.99e-13!60;UBERON:0004872!4.47e-13!84;UBERON:0000486!3.31e-12!82;UBERON:0001637!4.88e-12!42;UBERON:0003509!4.88e-12!42;UBERON:0004572!4.88e-12!42;UBERON:0001134!6.13e-12!61;UBERON:0002036!6.13e-12!61;UBERON:0003082!6.13e-12!61;UBERON:0000926!1.04e-11!448;UBERON:0004120!1.04e-11!448;UBERON:0006603!1.04e-11!448;UBERON:0002385!2.37e-11!63;UBERON:0001015!2.37e-11!63;UBERON:0000383!2.37e-11!63;UBERON:0004573!5.52e-10!33;UBERON:0004571!5.52e-10!33;UBERON:0002384!5.41e-09!375;UBERON:0005256!9.34e-09!143;UBERON:0003914!4.14e-08!118;UBERON:0000947!5.72e-07!21;UBERON:0010191!5.72e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.87e-10;33!UBERON:0004571;4.87e-10;33!UBERON:0001637;8.99e-10;42!UBERON:0003509;8.99e-10;42!UBERON:0004572;8.99e-10;42!UBERON:0007500;1.01e-08;56!UBERON:0001981;1.01e-08;56!UBERON:0004537;1.01e-08;56!UBERON:0002049;1.05e-07;75!UBERON:0007798;1.05e-07;75!UBERON:0000947;1.23e-07;21!UBERON:0010191;1.23e-07;21!UBERON:0003914;1.93e-07;74!UBERON:0000055;4.50e-07;65!UBERON:0002384;6.09e-07;198 | |||
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| ||
|short_description=p@chr10:17275853..17275926,- | |short_description=p@chr10:17275853..17275926,- | ||
}} | }} |
Latest revision as of 12:16, 23 July 2015
Short description: | p@chr10:17275853..17275926, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17275853..17275926, - |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.55e-19 | 121 |
multi fate stem cell | 5.76e-19 | 427 |
fibroblast | 1.97e-18 | 76 |
somatic stem cell | 1.92e-17 | 433 |
stem cell | 3.49e-16 | 441 |
muscle precursor cell | 1.19e-14 | 58 |
myoblast | 1.19e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.19e-14 | 58 |
muscle cell | 4.03e-14 | 55 |
electrically responsive cell | 5.97e-13 | 61 |
electrically active cell | 5.97e-13 | 61 |
smooth muscle cell | 1.62e-11 | 43 |
smooth muscle myoblast | 1.62e-11 | 43 |
vascular associated smooth muscle cell | 9.06e-10 | 32 |
skin fibroblast | 2.30e-09 | 23 |
connective tissue cell | 1.13e-08 | 361 |
embryonic cell | 3.69e-08 | 250 |
motile cell | 1.78e-07 | 386 |
mesenchymal cell | 3.20e-07 | 354 |