FFCP PHASE1:Hg19::chr6:44355499..44355514,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=988 | |EntrezGene=988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1743 | |HGNC=1743 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=197bp_to_uc003oxl.2_5end | |association_with_transcript=197bp_to_uc003oxl.2_5end | ||
|cluster_id=chr6:44355499..44355514,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_3_at_CDC5L_5end | |description=CAGE_peak_3_at_CDC5L_5end | ||
|id=chr6:44355499..44355514,+ | |id=chr6:44355499..44355514,+ | ||
|ontology_enrichment_celltype=CL:0000860;2.68e-50;33!CL:0002057;2.68e-50;33!CL:0000576;1.41e-40;48!CL:0000473;8.80e-37;39!CL:0000234;8.80e-37;39!CL:0000766;5.54e-31;69!CL:0000763;7.04e-17;100!CL:0000094;8.04e-17;8!CL:0002087;6.64e-16;104!CL:0000738;7.66e-15;136!CL:0000988;3.32e-12;177!CL:0002393;6.51e-12;6!CL:0002397;6.51e-12;6!CL:0000081;1.08e-11;11!CL:0000840;4.94e-10;5!CL:0000775;1.59e-07;3!CL:0000624;2.20e-07;6!CL:0000767;4.20e-07;3!CL:0000219;4.95e-07;193!CL:0000451;7.43e-07;10!CL:0000875;8.69e-07;3!CL:0002396;8.69e-07;3 | |ontology_enrichment_celltype=CL:0000037!3.38e-50!172;CL:0000566!3.38e-50!172;CL:0000988!8.90e-47!182;CL:0002032!3.54e-46!165;CL:0000837!3.54e-46!165;CL:0000738!2.74e-43!140;CL:0000763!3.81e-38!112;CL:0000049!3.81e-38!112;CL:0002087!7.73e-33!119;CL:0002031!8.94e-33!124;CL:0000766!3.78e-31!76;CL:0002057!5.84e-29!42;CL:0000860!7.77e-29!45;CL:0000557!3.06e-27!71;CL:0002009!5.11e-26!65;CL:0000839!3.08e-25!70;CL:0002194!1.07e-24!63;CL:0000576!1.07e-24!63;CL:0000040!1.07e-24!63;CL:0000559!1.07e-24!63;CL:0000134!7.04e-16!358;CL:0002320!7.84e-15!365;CL:0000219!1.17e-14!390;CL:0000034!5.54e-10!444;CL:0000048!8.18e-10!430;CL:0000723!4.80e-09!436;CL:0000542!5.49e-08!53;CL:0000051!5.49e-08!53;CL:0000838!1.13e-07!52;CL:0002393!1.18e-07!9;CL:0002397!1.18e-07!9;CL:0000094!1.47e-07!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;2.68e-50;33!CL:0002057;2.68e-50;33!CL:0000576;1.41e-40;48!CL:0000473;8.80e-37;39!CL:0000234;8.80e-37;39!CL:0000766;5.54e-31;69!CL:0000763;7.04e-17;100!CL:0000094;8.04e-17;8!CL:0002087;6.64e-16;104!CL:0000738;7.66e-15;136!CL:0000988;3.32e-12;177!CL:0002393;6.51e-12;6!CL:0002397;6.51e-12;6!CL:0000081;1.08e-11;11!CL:0000840;4.94e-10;5!CL:0000775;1.59e-07;3!CL:0000624;2.20e-07;6!CL:0000767;4.20e-07;3!CL:0000219;4.95e-07;193!CL:0000451;7.43e-07;10!CL:0000875;8.69e-07;3!CL:0002396;8.69e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000766,2.71e-77,72;CL:0000860,8.88e-72,42;CL:0002057,8.88e-72,42;CL:0000738,8.72e-70,136;CL:0000557,3.99e-67,67;CL:0002009,1.49e-66,61;CL:0000037,1.74e-65,168;CL:0000473,7.06e-64,48;CL:0000234,7.06e-64,48;CL:0000763,2.57e-63,108;CL:0000049,2.57e-63,108;CL:0002194,4.30e-63,59;CL:0000576,4.30e-63,59;CL:0000040,4.30e-63,59;CL:0000559,4.30e-63,59;CL:0000988,6.08e-61,177;CL:0002032,5.95e-60,161;CL:0000837,5.95e-60,161;CL:0000839,8.90e-60,66;CL:0002087,3.34e-55,115;CL:0002031,7.75e-54,120;CL:0000134,1.15e-21,354;CL:0002320,8.77e-21,361;CL:0000219,1.58e-18,386;CL:0002393,4.47e-17,9;CL:0002397,4.47e-17,9;CL:0000094,7.73e-17,8;CL:0000034,1.49e-14,441;CL:0000048,1.63e-14,427;CL:0000723,5.48e-14,433;CL:0000081,1.05e-11,11;CL:0000840,6.25e-10,5;CL:0001029,6.25e-10,5;CL:0000775,1.59e-07,3;CL:0000624,2.13e-07,6;CL:0000767,4.01e-07,3;CL:0000875,7.33e-07,3;CL:0002396,7.33e-07,3;CL:0000451,8.54e-07,10 | ||
|ontology_enrichment_uberon=UBERON:0000178;5.15e-12;15!UBERON:0000179;5.15e-12;15!UBERON:0000463;5.15e-12;15 | |ontology_enrichment_development_v019=CL:0002057;7.86e-51;42!CL:0000049;1.38e-17;108 | ||
|ontology_enrichment_disease=DOID:2531!6.21e-08!51;DOID:0060083!6.21e-08!51;DOID:1240!4.09e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.41e-30!102;UBERON:0003061!2.41e-30!102;UBERON:0002193!1.57e-24!112;UBERON:0002371!3.53e-22!80;UBERON:0001474!2.15e-21!86;UBERON:0004765!3.98e-16!101;UBERON:0001434!3.98e-16!101;UBERON:0002405!9.41e-14!115;UBERON:0002384!1.50e-13!375;UBERON:0003081!2.73e-07!216;UBERON:0000178!4.63e-07!15;UBERON:0000179!4.63e-07!15;UBERON:0000463!4.63e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.15e-12;15!UBERON:0000179;5.15e-12;15!UBERON:0000463;5.15e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.27e-67,98;UBERON:0003061,2.27e-67,98;UBERON:0002371,1.77e-59,76;UBERON:0002193,2.52e-59,108;UBERON:0001474,2.21e-58,82;UBERON:0004765,1.12e-51,90;UBERON:0002405,2.27e-47,93;UBERON:0001434,8.30e-45,100;UBERON:0003081,1.34e-22,203;UBERON:0002204,4.24e-21,167;UBERON:0002384,1.40e-19,371;UBERON:0000178,3.65e-12,15;UBERON:0000179,3.65e-12,15;UBERON:0000463,3.65e-12,15;UBERON:0000926,5.88e-11,315;UBERON:0004120,5.88e-11,315;UBERON:0006603,5.88e-11,315 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.246242116153576,0,0,0.286235987131057,0.273748850145768,0,0.458480434487708,0.738905305049512,0.472264687882075,7.86728553697808,6.52509976765262,5.57338043937874,0,0,0,1.62681121218633,0.284338464974843,1.17440175733939,4.9859586767869,5.01361118675354,5.20826089718044,0,0,0.257575567634187,3.92575244704825,3.02300754951048,2.18325655069035,4.18372266430232,5.34518254428373,7.43295290148249,4.31538588483226,3.58624989140741,6.62150243688039,6.55016793399575,7.10033151942209,10.8341189275473,4.1413314699373,4.63940455098338,4.94391665779186,4.89734227793444,7.70229664982625,5.75403413219137,5.60747210317417,2.79249120670285,5.11469700639233,1.7412554317715,3.40431134814684,4.9825779919646,3.26623264833766,5.21482918420201,4.99534342821768,2.42159801053347,2.20966581592539,2.84816148696796,7.39393502091796,5.31510749912609,3.14487968262564,3.48218756554135,2.25265339262259,3.05378614724452,4.84521664360123,5.9675003159727,5.29726045917438,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,1.52909291250092,1.32171328579026,3.36305137788922,0.263384084775077,6.68813218387032,3.93010762749165,2.67281948699362,0,0.977766799900771,0.473447805734733,0,0.445641827540694,2.65145316727353,1.32920336750173,0.812411591295047,0,0.390178042679635,0,0.276350017785848,0.579606171470105,0.889719378972363,0.535081656179426,0,0.566546713487831,1.14966148080576,0,1.01207876807801,0.318565414324097,0.651083453856419,0,0.602300476311091,0,0,0.473554504088034,0,4.63695509416885,6.95344509037119,4.05508330871837,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0,0,0.486634870302636,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,1.62273696827342,2.08955684759121,1.06366368415092,1.19245312152671,2.28797964312051,0.74291500265913,0,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0.446498641420399,0.22452937262617,0.225222960966644,0,0,0,28.9916918359339,23.2668158488995,0,0,0.12663051166458,0.264818361626438,0,0.354668382198357,0,0,0,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0.567160915800105,0.538168907066586,0,0,0,0,0,0,0.337552664482532,0.194874010322397,0.252433774244115,0.184099797284599,0.161646056818812,0,0.201504196455281,0,0,0.545492241181669,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,0,0.946454400318751,0.168584690078102,0.482022059766964,0.110293972732394,0.435758888184812,0.474541238222193,0.539325232640658,0,1.15424147083917,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,1.17002132569619,0.891786973732369,0,0.16798212819886,0,0,0,0,3.94130590316755,0.264145302039678,1.03664057770386,0.720599767084807,0,0.126995788584338,0,0,0,0,0.600686115687835,0,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,1.07436577943937,0.560425719967636,5.12279976525011,4.52817907204986,4.10697716095195,0.254094624222463,0,0,0,0,31.4582950057817,29.9161459204025,40.6127203167315,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0,0,4.34212854858063,4.31428401637234,4.16237475433433,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0.601519410909855,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0.309123034943167,1.73981983154852,2.0627374980147,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.170453254832202,0.178064071293475,0,0,0,0.10115778085555,0,0.62962469366128,0,0.616067160352178,0.532306030317022,0,0,0.286249773483982,0.744316738719335,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0,0,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0,0,4.05958087385735,1.52927441428475,1.70894156152249,2.1440859791201,2.05681136543097,1.94541993357815,1.62009431171434,0,0,0,0.245040215981032,0.743212700502875,1.00988449083511,0.995985806877798,1.27541018183058,1.59663497146253,0.957526850661834,1.2700414963433,0.324621940274555,0.280797178113459,0,1.41011906195721,0,0.846458889008016,0.1605880751037,0.403599414382095,0.425846237690326,1.37402137902306,1.53620382154229,0.447352215784832,1.16794399198336,0.97694047701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| ||
|short_description=p3@CDC5L | |short_description=p3@CDC5L | ||
}} | }} |
Latest revision as of 00:37, 19 September 2015
Short description: | p3@CDC5L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDC5L_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 197bp_to_uc003oxl.2_5end |
EntrezGene: | CDC5L |
HGNC: | 1743 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.27e-67 | 98 |
blood island | 2.27e-67 | 98 |
bone marrow | 1.77e-59 | 76 |
hemolymphoid system | 2.52e-59 | 108 |
bone element | 2.21e-58 | 82 |
skeletal element | 1.12e-51 | 90 |
immune system | 2.27e-47 | 93 |
skeletal system | 8.30e-45 | 100 |
lateral plate mesoderm | 1.34e-22 | 203 |
musculoskeletal system | 4.24e-21 | 167 |
connective tissue | 1.40e-19 | 371 |
blood | 3.65e-12 | 15 |
haemolymphatic fluid | 3.65e-12 | 15 |
organism substance | 3.65e-12 | 15 |
mesoderm | 5.88e-11 | 315 |
mesoderm-derived structure | 5.88e-11 | 315 |
presumptive mesoderm | 5.88e-11 | 315 |